EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038311 (Gene tree)
Gene ID: 103035945
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10230 bases
Position: chr7:25378031-25388260
Accession: 103035945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028892	Snurportin1	PF11538.8	8.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030686	-	3487	XM_007228547	ENSAMXP00000028892	362 (aa)	XP_007228609	W5KN02

Gene Model

Click here to download ENSAMXG00000038311's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038311	snupn	96	65.634	ENSG00000169371	SNUPN	100	74.603	Homo_sapiens
ENSAMXG00000038311	snupn	99	77.534	ENSAPOG00000016953	snupn	98	77.534	Acanthochromis_polyacanthus
ENSAMXG00000038311	snupn	96	65.254	ENSAMEG00000008291	SNUPN	95	66.102	Ailuropoda_melanoleuca
ENSAMXG00000038311	snupn	99	76.438	ENSACIG00000012409	snupn	98	76.438	Amphilophus_citrinellus
ENSAMXG00000038311	snupn	99	77.808	ENSAOCG00000018096	snupn	98	77.808	Amphiprion_ocellaris
ENSAMXG00000038311	snupn	99	77.808	ENSAPEG00000008834	snupn	98	77.808	Amphiprion_percula
ENSAMXG00000038311	snupn	99	78.082	ENSATEG00000021019	snupn	98	78.082	Anabas_testudineus
ENSAMXG00000038311	snupn	97	64.507	ENSANAG00000025568	SNUPN	96	65.634	Aotus_nancymaae
ENSAMXG00000038311	snupn	96	77.143	ENSACLG00000025155	snupn	94	77.778	Astatotilapia_calliptera
ENSAMXG00000038311	snupn	96	66.479	ENSBTAG00000021293	SNUPN	95	67.042	Bos_taurus
ENSAMXG00000038311	snupn	84	43.831	WBGene00017746	F23F1.5	88	43.831	Caenorhabditis_elegans
ENSAMXG00000038311	snupn	96	65.527	ENSCJAG00000003005	SNUPN	95	66.382	Callithrix_jacchus
ENSAMXG00000038311	snupn	96	64.857	ENSCAFG00000018035	SNUPN	95	65.429	Canis_familiaris
ENSAMXG00000038311	snupn	96	65.070	ENSCHIG00000018047	SNUPN	95	66.197	Capra_hircus
ENSAMXG00000038311	snupn	96	63.559	ENSTSYG00000037224	SNUPN	95	64.407	Carlito_syrichta
ENSAMXG00000038311	snupn	96	57.790	ENSCAPG00000005061	SNUPN	95	57.790	Cavia_aperea
ENSAMXG00000038311	snupn	96	66.572	ENSCPOG00000034772	SNUPN	95	66.572	Cavia_porcellus
ENSAMXG00000038311	snupn	97	64.225	ENSCCAG00000016169	-	96	65.352	Cebus_capucinus
ENSAMXG00000038311	snupn	97	64.345	ENSCATG00000039783	SNUPN	96	65.460	Cercocebus_atys
ENSAMXG00000038311	snupn	96	65.057	ENSCLAG00000016968	SNUPN	96	66.011	Chinchilla_lanigera
ENSAMXG00000038311	snupn	97	63.510	ENSCSAG00000019246	-	96	64.624	Chlorocebus_sabaeus
ENSAMXG00000038311	snupn	97	64.345	ENSCSAG00000014576	-	86	65.460	Chlorocebus_sabaeus
ENSAMXG00000038311	snupn	96	51.268	ENSCHOG00000005403	SNUPN	95	51.831	Choloepus_hoffmanni
ENSAMXG00000038311	snupn	99	67.751	ENSCPBG00000022172	SNUPN	93	67.751	Chrysemys_picta_bellii
ENSAMXG00000038311	snupn	97	64.903	ENSCANG00000029707	SNUPN	96	66.017	Colobus_angolensis_palliatus
ENSAMXG00000038311	snupn	96	64.972	ENSCGRG00001004622	Snupn	96	65.819	Cricetulus_griseus_chok1gshd
ENSAMXG00000038311	snupn	96	64.972	ENSCGRG00000002515	Snupn	96	65.819	Cricetulus_griseus_crigri
ENSAMXG00000038311	snupn	98	74.581	ENSCSEG00000003160	snupn	85	74.581	Cynoglossus_semilaevis
ENSAMXG00000038311	snupn	100	76.087	ENSCVAG00000010502	snupn	99	76.087	Cyprinodon_variegatus
ENSAMXG00000038311	snupn	100	81.644	ENSDARG00000008395	snupn	100	81.644	Danio_rerio
ENSAMXG00000038311	snupn	96	64.773	ENSDNOG00000044304	SNUPN	90	65.341	Dasypus_novemcinctus
ENSAMXG00000038311	snupn	97	64.903	ENSDORG00000009051	Snupn	96	65.460	Dipodomys_ordii
ENSAMXG00000038311	snupn	96	54.648	ENSETEG00000013792	SNUPN	95	54.648	Echinops_telfairi
ENSAMXG00000038311	snupn	98	55.285	ENSEBUG00000006682	snupn	95	55.285	Eptatretus_burgeri
ENSAMXG00000038311	snupn	96	65.070	ENSEASG00005015697	SNUPN	92	66.197	Equus_asinus_asinus
ENSAMXG00000038311	snupn	96	65.070	ENSECAG00000017726	SNUPN	95	66.197	Equus_caballus
ENSAMXG00000038311	snupn	66	64.804	ENSEEUG00000000981	-	65	67.039	Erinaceus_europaeus
ENSAMXG00000038311	snupn	97	75.342	ENSELUG00000023305	snupn	94	76.438	Esox_lucius
ENSAMXG00000038311	snupn	97	63.687	ENSFCAG00000040981	SNUPN	96	64.525	Felis_catus
ENSAMXG00000038311	snupn	97	65.730	ENSFDAG00000011599	SNUPN	97	65.730	Fukomys_damarensis
ENSAMXG00000038311	snupn	98	77.095	ENSFHEG00000017627	snupn	96	77.095	Fundulus_heteroclitus
ENSAMXG00000038311	snupn	96	74.212	ENSGMOG00000009272	snupn	100	75.429	Gadus_morhua
ENSAMXG00000038311	snupn	94	61.891	ENSGALG00000029537	SNUPN	98	60.490	Gallus_gallus
ENSAMXG00000038311	snupn	98	77.528	ENSGAFG00000004954	snupn	95	77.528	Gambusia_affinis
ENSAMXG00000038311	snupn	96	79.656	ENSGACG00000007450	snupn	100	79.656	Gasterosteus_aculeatus
ENSAMXG00000038311	snupn	100	66.489	ENSGAGG00000022470	SNUPN	100	66.755	Gopherus_agassizii
ENSAMXG00000038311	snupn	55	63.492	ENSGGOG00000004581	-	92	63.492	Gorilla_gorilla
ENSAMXG00000038311	snupn	96	77.143	ENSHBUG00000006950	snupn	94	78.348	Haplochromis_burtoni
ENSAMXG00000038311	snupn	97	64.326	ENSHGLG00000000536	SNUPN	97	65.449	Heterocephalus_glaber_female
ENSAMXG00000038311	snupn	97	64.326	ENSHGLG00100016161	SNUPN	97	65.449	Heterocephalus_glaber_male
ENSAMXG00000038311	snupn	100	75.946	ENSHCOG00000007262	snupn	98	77.358	Hippocampus_comes
ENSAMXG00000038311	snupn	100	87.603	ENSIPUG00000014460	Snupn	100	87.603	Ictalurus_punctatus
ENSAMXG00000038311	snupn	96	64.689	ENSSTOG00000005904	SNUPN	95	65.819	Ictidomys_tridecemlineatus
ENSAMXG00000038311	snupn	100	72.207	ENSKMAG00000009957	snupn	97	73.757	Kryptolebias_marmoratus
ENSAMXG00000038311	snupn	99	76.694	ENSLBEG00000020694	snupn	98	77.297	Labrus_bergylta
ENSAMXG00000038311	snupn	99	64.481	ENSLACG00000015801	SNUPN	99	66.393	Latimeria_chalumnae
ENSAMXG00000038311	snupn	97	75.921	ENSLOCG00000015064	snupn	95	75.921	Lepisosteus_oculatus
ENSAMXG00000038311	snupn	96	63.944	ENSLAFG00000004422	SNUPN	95	64.507	Loxodonta_africana
ENSAMXG00000038311	snupn	78	63.687	ENSMFAG00000003706	SNUPN	96	63.687	Macaca_fascicularis
ENSAMXG00000038311	snupn	97	64.624	ENSMMUG00000004784	SNUPN	96	65.738	Macaca_mulatta
ENSAMXG00000038311	snupn	97	60.167	ENSMLEG00000041966	SNUPN	96	60.167	Mandrillus_leucophaeus
ENSAMXG00000038311	snupn	96	81.197	ENSMAMG00000023109	snupn	94	81.197	Mastacembelus_armatus
ENSAMXG00000038311	snupn	96	77.429	ENSMZEG00005010806	snupn	94	78.063	Maylandia_zebra
ENSAMXG00000038311	snupn	96	65.254	ENSMAUG00000020426	Snupn	96	65.819	Mesocricetus_auratus
ENSAMXG00000038311	snupn	97	65.181	ENSMICG00000016438	SNUPN	96	66.017	Microcebus_murinus
ENSAMXG00000038311	snupn	96	66.102	ENSMOCG00000014238	Snupn	96	66.102	Microtus_ochrogaster
ENSAMXG00000038311	snupn	100	75.067	ENSMMOG00000001321	snupn	99	76.486	Mola_mola
ENSAMXG00000038311	snupn	99	63.784	ENSMODG00000008852	SNUPN	98	63.784	Monodelphis_domestica
ENSAMXG00000038311	snupn	98	78.933	ENSMALG00000015058	snupn	96	78.933	Monopterus_albus
ENSAMXG00000038311	snupn	96	65.819	MGP_CAROLIEiJ_G0032259	Snupn	96	66.102	Mus_caroli
ENSAMXG00000038311	snupn	96	65.537	ENSMUSG00000055334	Snupn	96	65.819	Mus_musculus
ENSAMXG00000038311	snupn	100	63.587	MGP_PahariEiJ_G0015126	Snupn	96	66.102	Mus_pahari
ENSAMXG00000038311	snupn	96	65.537	MGP_SPRETEiJ_G0033399	Snupn	96	65.819	Mus_spretus
ENSAMXG00000038311	snupn	96	65.439	ENSMPUG00000017324	SNUPN	95	66.006	Mustela_putorius_furo
ENSAMXG00000038311	snupn	96	55.182	ENSMLUG00000000038	-	100	56.022	Myotis_lucifugus
ENSAMXG00000038311	snupn	96	64.045	ENSMLUG00000027517	-	95	64.888	Myotis_lucifugus
ENSAMXG00000038311	snupn	100	59.517	ENSMLUG00000027485	-	100	60.322	Myotis_lucifugus
ENSAMXG00000038311	snupn	96	64.407	ENSNGAG00000018735	Snupn	95	65.254	Nannospalax_galili
ENSAMXG00000038311	snupn	96	77.429	ENSNBRG00000017919	snupn	94	78.063	Neolamprologus_brichardi
ENSAMXG00000038311	snupn	65	73.077	ENSNLEG00000035240	-	78	73.077	Nomascus_leucogenys
ENSAMXG00000038311	snupn	98	53.867	ENSOPRG00000015889	-	97	53.867	Ochotona_princeps
ENSAMXG00000038311	snupn	90	54.985	ENSODEG00000014491	SNUPN	95	55.224	Octodon_degus
ENSAMXG00000038311	snupn	98	76.190	ENSONIG00000012855	snupn	98	77.374	Oreochromis_niloticus
ENSAMXG00000038311	snupn	96	65.254	ENSOCUG00000008801	SNUPN	95	66.102	Oryctolagus_cuniculus
ENSAMXG00000038311	snupn	100	74.255	ENSORLG00000001836	snupn	99	75.676	Oryzias_latipes
ENSAMXG00000038311	snupn	100	75.676	ENSORLG00020021175	snupn	99	75.676	Oryzias_latipes_hni
ENSAMXG00000038311	snupn	100	76.216	ENSORLG00015014444	snupn	98	76.216	Oryzias_latipes_hsok
ENSAMXG00000038311	snupn	96	79.656	ENSOMEG00000004853	snupn	94	79.656	Oryzias_melastigma
ENSAMXG00000038311	snupn	96	62.921	ENSOGAG00000004915	SNUPN	96	64.045	Otolemur_garnettii
ENSAMXG00000038311	snupn	96	65.070	ENSOARG00000001991	SNUPN	92	66.197	Ovis_aries
ENSAMXG00000038311	snupn	96	65.634	ENSPPAG00000034351	SNUPN	95	66.197	Pan_paniscus
ENSAMXG00000038311	snupn	96	64.407	ENSPPRG00000023192	SNUPN	95	65.254	Panthera_pardus
ENSAMXG00000038311	snupn	96	64.407	ENSPTIG00000003528	SNUPN	95	65.254	Panthera_tigris_altaica
ENSAMXG00000038311	snupn	96	65.915	ENSPTRG00000007302	SNUPN	95	66.479	Pan_troglodytes
ENSAMXG00000038311	snupn	97	56.267	ENSPANG00000034514	SNUPN	96	57.382	Papio_anubis
ENSAMXG00000038311	snupn	100	74.451	ENSPKIG00000012444	snupn	100	76.099	Paramormyrops_kingsleyae
ENSAMXG00000038311	snupn	96	67.787	ENSPSIG00000015229	SNUPN	95	67.787	Pelodiscus_sinensis
ENSAMXG00000038311	snupn	98	72.951	ENSPMGG00000023843	snupn	97	74.247	Periophthalmus_magnuspinnatus
ENSAMXG00000038311	snupn	99	64.286	ENSPCIG00000007854	SNUPN	98	64.286	Phascolarctos_cinereus
ENSAMXG00000038311	snupn	100	75.477	ENSPFOG00000014221	snupn	96	77.961	Poecilia_formosa
ENSAMXG00000038311	snupn	100	75.477	ENSPLAG00000002339	snupn	96	77.961	Poecilia_latipinna
ENSAMXG00000038311	snupn	100	75.204	ENSPMEG00000012436	snupn	98	76.902	Poecilia_mexicana
ENSAMXG00000038311	snupn	100	74.932	ENSPREG00000012683	snupn	98	76.630	Poecilia_reticulata
ENSAMXG00000038311	snupn	96	58.310	ENSPPYG00000006663	SNUPN	95	58.873	Pongo_abelii
ENSAMXG00000038311	snupn	96	64.689	ENSPCOG00000025482	SNUPN	95	65.254	Propithecus_coquereli
ENSAMXG00000038311	snupn	96	64.306	ENSPVAG00000010035	SNUPN	96	63.687	Pteropus_vampyrus
ENSAMXG00000038311	snupn	96	77.143	ENSPNYG00000008752	snupn	94	78.348	Pundamilia_nyererei
ENSAMXG00000038311	snupn	100	90.608	ENSPNAG00000026875	snupn	100	90.608	Pygocentrus_nattereri
ENSAMXG00000038311	snupn	100	63.859	ENSRNOG00000005426	Snupn	100	64.130	Rattus_norvegicus
ENSAMXG00000038311	snupn	97	64.624	ENSRBIG00000038665	SNUPN	96	65.738	Rhinopithecus_bieti
ENSAMXG00000038311	snupn	97	64.624	ENSRROG00000043625	SNUPN	96	65.738	Rhinopithecus_roxellana
ENSAMXG00000038311	snupn	97	64.507	ENSSBOG00000029086	-	96	65.634	Saimiri_boliviensis_boliviensis
ENSAMXG00000038311	snupn	91	78.248	ENSSFOG00015022264	snupn	66	78.248	Scleropages_formosus
ENSAMXG00000038311	snupn	99	79.452	ENSSMAG00000005485	snupn	98	79.452	Scophthalmus_maximus
ENSAMXG00000038311	snupn	98	81.285	ENSSDUG00000023461	snupn	96	81.285	Seriola_dumerili
ENSAMXG00000038311	snupn	98	80.952	ENSSLDG00000001425	snupn	96	80.952	Seriola_lalandi_dorsalis
ENSAMXG00000038311	snupn	80	65.363	ENSSARG00000005585	SNUPN	79	67.598	Sorex_araneus
ENSAMXG00000038311	snupn	99	65.508	ENSSPUG00000014331	SNUPN	95	68.258	Sphenodon_punctatus
ENSAMXG00000038311	snupn	99	79.178	ENSSPAG00000001216	snupn	98	79.178	Stegastes_partitus
ENSAMXG00000038311	snupn	96	65.634	ENSSSCG00000001877	SNUPN	95	66.197	Sus_scrofa
ENSAMXG00000038311	snupn	98	77.716	ENSTRUG00000016085	snupn	94	77.716	Takifugu_rubripes
ENSAMXG00000038311	snupn	95	66.761	ENSTNIG00000008456	snupn	100	68.466	Tetraodon_nigroviridis
ENSAMXG00000038311	snupn	96	63.559	ENSTBEG00000002434	SNUPN	95	63.559	Tupaia_belangeri
ENSAMXG00000038311	snupn	96	60.000	ENSTTRG00000011484	SNUPN	95	60.563	Tursiops_truncatus
ENSAMXG00000038311	snupn	96	65.254	ENSUAMG00000022723	SNUPN	95	66.102	Ursus_americanus
ENSAMXG00000038311	snupn	96	65.537	ENSUMAG00000003738	SNUPN	95	66.384	Ursus_maritimus
ENSAMXG00000038311	snupn	96	64.103	ENSVVUG00000019574	SNUPN	95	64.672	Vulpes_vulpes
ENSAMXG00000038311	snupn	96	69.253	ENSXETG00000015280	snupn	99	69.253	Xenopus_tropicalis
ENSAMXG00000038311	snupn	100	75.477	ENSXMAG00000006634	snupn	98	77.961	Xiphophorus_maculatus