EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038380 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4391 bases
Position: chr24:35870137-35874527
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029877	Transposase_22	PF02994.14	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000038978	-	807	-	ENSAMXP00000029877	268 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038380	-	50	36.296	ENSAMXG00000041578	-	53	36.296
ENSAMXG00000038380	-	66	98.870	ENSAMXG00000038431	-	76	98.870
ENSAMXG00000038380	-	51	33.099	ENSAMXG00000038779	-	55	33.099
ENSAMXG00000038380	-	74	98.990	ENSAMXG00000036242	-	85	98.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038380	-	79	50.000	ENSAPEG00000003315	-	53	50.000	Amphiprion_percula
ENSAMXG00000038380	-	81	58.108	ENSCVAG00000020967	-	80	58.108	Cyprinodon_variegatus
ENSAMXG00000038380	-	75	41.584	ENSOMEG00000021677	-	86	41.584	Oryzias_melastigma
ENSAMXG00000038380	-	75	54.950	ENSOMEG00000000587	-	85	54.950	Oryzias_melastigma
ENSAMXG00000038380	-	61	58.788	ENSSDUG00000020162	-	72	58.788	Seriola_dumerili