EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038383 (Gene tree)
Gene ID: 103039647
Gene Symbol: -
Alias: -
Full Name: chromosome 10 C8orf88 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9888 bases
Position: chr10:31698718-31708605
Accession: 103039647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000054407	eIF_4EBP	PF05456.11	4.6e-05	1	1
ENSAMXP00000027889	eIF_4EBP	PF05456.11	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057119	-	3995	XM_022673967	ENSAMXP00000027889	136 (aa)	XP_022529688	-
ENSAMXT00000039437	-	3230	XM_007256504	ENSAMXP00000054407	138 (aa)	XP_007256566	W5LAT5

Gene Model

Click here to download ENSAMXG00000038383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038383	-	95	55.814	ENSIPUG00000001158	c1h8orf88	85	55.814	Ictalurus_punctatus
ENSAMXG00000038383	-	93	53.125	ENSPKIG00000018645	-	100	53.125	Paramormyrops_kingsleyae
ENSAMXG00000038383	-	99	68.148	ENSPNAG00000000699	-	100	68.148	Pygocentrus_nattereri
ENSAMXG00000038383	-	92	51.969	ENSSFOG00015001615	cunh8orf88	91	51.969	Scleropages_formosus