EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038417 (Gene tree)
Gene ID: 103030527
Gene Symbol: zgc:172131
Alias: -
Full Name: GTPase IMAP family member 8-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8968 bases
Position: chr20:9723541-9732508
Accession: 103030527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044434	MMR_HSR1	PF01926.23	2.9e-05	1	1
ENSAMXP00000035734	MMR_HSR1	PF01926.23	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044106	-	3207	XM_022681038	ENSAMXP00000044434	442 (aa)	XP_022536759	UPI000BBDA2B7
ENSAMXT00000051822	-	3250	-	ENSAMXP00000035734	446 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038417	zgc:172131	79	41.500	ENSAMXG00000031962	-	69	42.105
ENSAMXG00000038417	zgc:172131	80	38.889	ENSAMXG00000035878	-	79	38.889
ENSAMXG00000038417	zgc:172131	69	45.122	ENSAMXG00000002402	-	68	45.122
ENSAMXG00000038417	zgc:172131	91	35.052	ENSAMXG00000036435	-	92	33.810
ENSAMXG00000038417	zgc:172131	92	42.473	ENSAMXG00000041141	-	89	42.473
ENSAMXG00000038417	zgc:172131	77	32.308	ENSAMXG00000021387	-	67	32.308
ENSAMXG00000038417	zgc:172131	53	30.992	ENSAMXG00000041240	-	97	30.992
ENSAMXG00000038417	zgc:172131	77	40.761	ENSAMXG00000013799	-	64	40.761
ENSAMXG00000038417	zgc:172131	91	41.530	ENSAMXG00000035621	-	95	41.530
ENSAMXG00000038417	zgc:172131	94	41.530	ENSAMXG00000038457	-	92	41.530
ENSAMXG00000038417	zgc:172131	80	39.444	ENSAMXG00000042278	-	61	39.444
ENSAMXG00000038417	zgc:172131	93	39.779	ENSAMXG00000032368	-	79	41.081
ENSAMXG00000038417	zgc:172131	76	40.500	ENSAMXG00000007079	-	78	40.500
ENSAMXG00000038417	zgc:172131	91	40.541	ENSAMXG00000038070	-	97	40.541
ENSAMXG00000038417	zgc:172131	93	34.872	ENSAMXG00000002562	-	84	48.780
ENSAMXG00000038417	zgc:172131	91	30.508	ENSAMXG00000038580	-	87	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038417	zgc:172131	58	35.361	ENSAPOG00000007123	-	92	35.361	Acanthochromis_polyacanthus
ENSAMXG00000038417	zgc:172131	79	42.246	ENSACIG00000019509	-	87	42.246	Amphilophus_citrinellus
ENSAMXG00000038417	zgc:172131	83	39.487	ENSACIG00000002950	-	56	39.487	Amphilophus_citrinellus
ENSAMXG00000038417	zgc:172131	78	40.816	ENSAOCG00000022559	si:dkey-73p2.1	75	40.816	Amphiprion_ocellaris
ENSAMXG00000038417	zgc:172131	93	38.660	ENSATEG00000011635	-	79	38.308	Anabas_testudineus
ENSAMXG00000038417	zgc:172131	93	42.553	ENSATEG00000011931	-	88	42.553	Anabas_testudineus
ENSAMXG00000038417	zgc:172131	95	36.000	ENSATEG00000011594	-	85	36.000	Anabas_testudineus
ENSAMXG00000038417	zgc:172131	76	31.662	ENSACLG00000003285	-	81	31.662	Astatotilapia_calliptera
ENSAMXG00000038417	zgc:172131	77	40.741	ENSCVAG00000018895	-	86	40.741	Cyprinodon_variegatus
ENSAMXG00000038417	zgc:172131	95	34.653	ENSCVAG00000015638	-	80	34.653	Cyprinodon_variegatus
ENSAMXG00000038417	zgc:172131	91	40.642	ENSCVAG00000011321	-	90	40.642	Cyprinodon_variegatus
ENSAMXG00000038417	zgc:172131	85	56.311	ENSDARG00000076269	zgc:172131	99	56.311	Danio_rerio
ENSAMXG00000038417	zgc:172131	92	31.282	ENSDARG00000039752	si:ch73-308m11.1	71	31.282	Danio_rerio
ENSAMXG00000038417	zgc:172131	73	41.624	ENSDARG00000088906	CABZ01059403.1	94	41.624	Danio_rerio
ENSAMXG00000038417	zgc:172131	51	39.827	ENSHBUG00000009438	-	79	39.827	Haplochromis_burtoni
ENSAMXG00000038417	zgc:172131	76	38.298	ENSIPUG00000009955	-	69	38.298	Ictalurus_punctatus
ENSAMXG00000038417	zgc:172131	93	32.584	ENSIPUG00000023842	-	57	32.584	Ictalurus_punctatus
ENSAMXG00000038417	zgc:172131	50	33.047	ENSIPUG00000000908	-	64	33.047	Ictalurus_punctatus
ENSAMXG00000038417	zgc:172131	93	30.569	ENSIPUG00000023837	-	55	30.569	Ictalurus_punctatus
ENSAMXG00000038417	zgc:172131	91	37.838	ENSLBEG00000010225	-	81	37.838	Labrus_bergylta
ENSAMXG00000038417	zgc:172131	90	30.310	ENSLBEG00000009529	-	87	30.310	Labrus_bergylta
ENSAMXG00000038417	zgc:172131	77	33.831	ENSLOCG00000003059	-	95	33.831	Lepisosteus_oculatus
ENSAMXG00000038417	zgc:172131	79	37.778	ENSLOCG00000018071	-	57	37.778	Lepisosteus_oculatus
ENSAMXG00000038417	zgc:172131	90	39.227	ENSLOCG00000013437	-	88	39.227	Lepisosteus_oculatus
ENSAMXG00000038417	zgc:172131	75	39.326	ENSLOCG00000017850	-	59	39.326	Lepisosteus_oculatus
ENSAMXG00000038417	zgc:172131	95	31.178	ENSLOCG00000011879	-	97	31.178	Lepisosteus_oculatus
ENSAMXG00000038417	zgc:172131	90	33.092	ENSLOCG00000011749	-	90	33.092	Lepisosteus_oculatus
ENSAMXG00000038417	zgc:172131	93	30.858	ENSLOCG00000011761	-	76	30.858	Lepisosteus_oculatus
ENSAMXG00000038417	zgc:172131	55	36.000	ENSMZEG00005016562	-	72	38.462	Maylandia_zebra
ENSAMXG00000038417	zgc:172131	95	38.660	ENSMALG00000004242	-	87	38.660	Monopterus_albus
ENSAMXG00000038417	zgc:172131	80	41.573	ENSONIG00000016497	-	75	41.111	Oreochromis_niloticus
ENSAMXG00000038417	zgc:172131	90	41.989	ENSONIG00000009177	-	99	41.989	Oreochromis_niloticus
ENSAMXG00000038417	zgc:172131	92	42.408	ENSONIG00000000243	-	91	42.408	Oreochromis_niloticus
ENSAMXG00000038417	zgc:172131	90	42.553	ENSONIG00000005491	-	94	42.553	Oreochromis_niloticus
ENSAMXG00000038417	zgc:172131	90	35.000	ENSONIG00000018722	-	90	35.000	Oreochromis_niloticus
ENSAMXG00000038417	zgc:172131	95	44.068	ENSONIG00000012661	-	98	44.068	Oreochromis_niloticus
ENSAMXG00000038417	zgc:172131	86	33.728	ENSORLG00000026065	-	79	33.728	Oryzias_latipes
ENSAMXG00000038417	zgc:172131	91	34.896	ENSPMGG00000008406	-	86	34.896	Periophthalmus_magnuspinnatus
ENSAMXG00000038417	zgc:172131	90	39.521	ENSPMGG00000017780	-	91	36.816	Periophthalmus_magnuspinnatus
ENSAMXG00000038417	zgc:172131	91	38.333	ENSPFOG00000023369	-	94	38.333	Poecilia_formosa
ENSAMXG00000038417	zgc:172131	94	40.769	ENSPFOG00000000432	-	77	40.769	Poecilia_formosa
ENSAMXG00000038417	zgc:172131	91	37.500	ENSPLAG00000010015	-	93	38.000	Poecilia_latipinna
ENSAMXG00000038417	zgc:172131	91	32.110	ENSPLAG00000023243	-	76	32.110	Poecilia_latipinna
ENSAMXG00000038417	zgc:172131	50	36.481	ENSPREG00000007300	-	91	36.481	Poecilia_reticulata
ENSAMXG00000038417	zgc:172131	91	34.595	ENSPNYG00000023532	-	92	34.595	Pundamilia_nyererei
ENSAMXG00000038417	zgc:172131	94	31.250	ENSPNAG00000025944	-	52	31.250	Pygocentrus_nattereri
ENSAMXG00000038417	zgc:172131	93	30.969	ENSPNAG00000025951	-	60	31.206	Pygocentrus_nattereri
ENSAMXG00000038417	zgc:172131	51	33.478	ENSPNAG00000025993	-	69	33.478	Pygocentrus_nattereri
ENSAMXG00000038417	zgc:172131	50	35.586	ENSPNAG00000008992	-	63	35.586	Pygocentrus_nattereri
ENSAMXG00000038417	zgc:172131	92	32.447	ENSPNAG00000014035	-	88	32.447	Pygocentrus_nattereri
ENSAMXG00000038417	zgc:172131	90	30.435	ENSPNAG00000025964	-	51	30.435	Pygocentrus_nattereri
ENSAMXG00000038417	zgc:172131	83	41.429	ENSSFOG00015007874	-	95	41.429	Scleropages_formosus
ENSAMXG00000038417	zgc:172131	51	35.683	ENSSFOG00015006469	-	57	35.683	Scleropages_formosus
ENSAMXG00000038417	zgc:172131	75	38.857	ENSSMAG00000016061	-	79	38.857	Scophthalmus_maximus
ENSAMXG00000038417	zgc:172131	74	42.246	ENSSDUG00000023539	-	79	42.246	Seriola_dumerili
ENSAMXG00000038417	zgc:172131	74	41.935	ENSSDUG00000023613	-	57	41.935	Seriola_dumerili
ENSAMXG00000038417	zgc:172131	92	30.189	ENSSDUG00000004973	-	90	30.189	Seriola_dumerili
ENSAMXG00000038417	zgc:172131	94	30.664	ENSSDUG00000020733	-	87	30.841	Seriola_dumerili
ENSAMXG00000038417	zgc:172131	91	41.709	ENSSLDG00000007079	-	65	41.709	Seriola_lalandi_dorsalis
ENSAMXG00000038417	zgc:172131	90	33.125	ENSSPAG00000015913	-	82	33.125	Stegastes_partitus
ENSAMXG00000038417	zgc:172131	97	33.679	ENSSPAG00000013926	-	87	36.782	Stegastes_partitus
ENSAMXG00000038417	zgc:172131	94	33.163	ENSSPAG00000015878	-	85	33.163	Stegastes_partitus
ENSAMXG00000038417	zgc:172131	92	40.437	ENSXCOG00000012536	-	79	40.437	Xiphophorus_couchianus
ENSAMXG00000038417	zgc:172131	96	38.636	ENSXMAG00000006639	-	87	38.636	Xiphophorus_maculatus