EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038431 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1534 bases
Position: chr16:18286242-18287775
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000054515	Transposase_22	PF02994.14	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033096	-	699	-	ENSAMXP00000054515	232 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038431	-	91	98.113	ENSAMXG00000036242	-	91	98.113
ENSAMXG00000038431	-	69	33.742	ENSAMXG00000038779	-	63	33.742
ENSAMXG00000038431	-	76	98.870	ENSAMXG00000038380	-	66	98.870
ENSAMXG00000038431	-	68	37.342	ENSAMXG00000041578	-	62	37.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038431	-	91	49.296	ENSAPEG00000003315	-	52	49.296	Amphiprion_percula
ENSAMXG00000038431	-	73	50.000	ENSAPEG00000017850	-	50	50.000	Amphiprion_percula
ENSAMXG00000038431	-	91	59.906	ENSCVAG00000020967	-	77	59.906	Cyprinodon_variegatus
ENSAMXG00000038431	-	88	42.157	ENSOMEG00000021677	-	87	42.157	Oryzias_melastigma
ENSAMXG00000038431	-	90	54.762	ENSOMEG00000000587	-	89	54.762	Oryzias_melastigma
ENSAMXG00000038431	-	84	56.633	ENSSDUG00000020162	-	86	56.633	Seriola_dumerili