EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038475 (Gene tree)
Gene ID: 107197383
Gene Symbol: npm2b
Alias: npm2|zgc:163013
Full Name: nucleoplasmin-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2616 bases
Position: chrAPWO02002391.1:333397-336012
Accession: 107197383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000027348	Nucleoplasmin	PF03066.15	1.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031243	-	600	XM_022664589	ENSAMXP00000027348	189 (aa)	XP_022520310	UPI000BBDC357

Gene Model

Click here to download ENSAMXG00000038475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038475	npm2b	53	42.308	ENSAMXG00000039828	npm3	53	40.777
ENSAMXG00000038475	npm2b	54	39.216	ENSAMXG00000001084	npm2a	68	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038475	npm2b	54	39.815	ENSG00000158806	NPM2	93	39.000	Homo_sapiens
ENSAMXG00000038475	npm2b	97	41.935	ENSACAG00000000163	-	55	44.545	Anolis_carolinensis
ENSAMXG00000038475	npm2b	54	39.815	ENSANAG00000038138	-	79	39.815	Aotus_nancymaae
ENSAMXG00000038475	npm2b	89	38.068	ENSBTAG00000046918	NPM2	55	44.340	Bos_taurus
ENSAMXG00000038475	npm2b	93	37.313	ENSCJAG00000020389	NPM2	77	40.000	Callithrix_jacchus
ENSAMXG00000038475	npm2b	80	38.462	ENSCAFG00020007666	-	52	40.351	Canis_lupus_dingo
ENSAMXG00000038475	npm2b	77	42.000	ENSCAFG00020015194	-	53	40.741	Canis_lupus_dingo
ENSAMXG00000038475	npm2b	77	40.268	ENSCAFG00020015318	-	50	39.048	Canis_lupus_dingo
ENSAMXG00000038475	npm2b	77	40.132	ENSCAFG00020015227	-	51	40.741	Canis_lupus_dingo
ENSAMXG00000038475	npm2b	89	37.500	ENSCHIG00000026056	NPM2	53	43.396	Capra_hircus
ENSAMXG00000038475	npm2b	57	41.441	ENSTSYG00000026275	NPM2	77	41.346	Carlito_syrichta
ENSAMXG00000038475	npm2b	50	37.895	ENSCAPG00000006057	NPM2	53	37.113	Cavia_aperea
ENSAMXG00000038475	npm2b	50	37.895	ENSCPOG00000039799	NPM2	52	37.113	Cavia_porcellus
ENSAMXG00000038475	npm2b	52	37.864	ENSCCAG00000035076	NPM2	76	37.864	Cebus_capucinus
ENSAMXG00000038475	npm2b	95	39.000	ENSCATG00000031833	NPM2	93	39.000	Cercocebus_atys
ENSAMXG00000038475	npm2b	56	36.111	ENSCLAG00000013600	NPM2	55	39.048	Chinchilla_lanigera
ENSAMXG00000038475	npm2b	54	38.889	ENSCSAG00000016588	NPM2	62	38.462	Chlorocebus_sabaeus
ENSAMXG00000038475	npm2b	95	39.000	ENSCANG00000040109	NPM2	93	39.000	Colobus_angolensis_palliatus
ENSAMXG00000038475	npm2b	98	83.957	ENSDARG00000053963	npm2b	100	82.353	Danio_rerio
ENSAMXG00000038475	npm2b	53	41.000	ENSDARG00000076391	npm2a	63	40.000	Danio_rerio
ENSAMXG00000038475	npm2b	57	36.607	ENSDORG00000012371	Npm2	53	36.607	Dipodomys_ordii
ENSAMXG00000038475	npm2b	56	44.545	ENSEASG00005018856	NPM2	54	44.660	Equus_asinus_asinus
ENSAMXG00000038475	npm2b	92	65.241	ENSELUG00000004822	npm2b	98	63.351	Esox_lucius
ENSAMXG00000038475	npm2b	59	40.179	ENSELUG00000017306	-	86	40.179	Esox_lucius
ENSAMXG00000038475	npm2b	76	41.830	ENSFDAG00000007971	NPM2	75	42.254	Fukomys_damarensis
ENSAMXG00000038475	npm2b	97	43.243	ENSGALG00000050870	NPM2	56	45.045	Gallus_gallus
ENSAMXG00000038475	npm2b	66	35.878	ENSGALG00000054664	-	76	36.607	Gallus_gallus
ENSAMXG00000038475	npm2b	54	39.815	ENSGGOG00000007071	NPM2	93	39.500	Gorilla_gorilla
ENSAMXG00000038475	npm2b	93	82.386	ENSIPUG00000013175	npm2b	100	81.250	Ictalurus_punctatus
ENSAMXG00000038475	npm2b	55	41.346	ENSIPUG00000010101	npm2a	67	41.346	Ictalurus_punctatus
ENSAMXG00000038475	npm2b	54	36.449	ENSSTOG00000013623	NPM2	50	36.111	Ictidomys_tridecemlineatus
ENSAMXG00000038475	npm2b	81	39.623	ENSJJAG00000018214	Npm2	54	39.474	Jaculus_jaculus
ENSAMXG00000038475	npm2b	84	46.951	ENSLACG00000016196	NPM2	69	50.000	Latimeria_chalumnae
ENSAMXG00000038475	npm2b	98	61.905	ENSLOCG00000014878	npm2b	95	64.550	Lepisosteus_oculatus
ENSAMXG00000038475	npm2b	81	35.088	ENSLAFG00000015584	NPM2	52	38.938	Loxodonta_africana
ENSAMXG00000038475	npm2b	95	39.000	ENSMFAG00000032098	NPM2	93	39.000	Macaca_fascicularis
ENSAMXG00000038475	npm2b	54	39.815	ENSMMUG00000002034	NPM2	79	39.815	Macaca_mulatta
ENSAMXG00000038475	npm2b	95	39.000	ENSMNEG00000010994	NPM2	93	39.000	Macaca_nemestrina
ENSAMXG00000038475	npm2b	95	39.000	ENSMLEG00000030071	NPM2	93	39.000	Mandrillus_leucophaeus
ENSAMXG00000038475	npm2b	54	39.815	ENSMICG00000030722	-	80	39.091	Microcebus_murinus
ENSAMXG00000038475	npm2b	54	40.566	ENSMOCG00000017251	Npm2	56	40.566	Microtus_ochrogaster
ENSAMXG00000038475	npm2b	67	39.231	ENSMODG00000009677	-	67	39.231	Monodelphis_domestica
ENSAMXG00000038475	npm2b	76	40.397	ENSMUSG00000047911	Npm2	57	44.792	Mus_musculus
ENSAMXG00000038475	npm2b	52	39.806	ENSMLUG00000016075	NPM2	50	39.423	Myotis_lucifugus
ENSAMXG00000038475	npm2b	90	37.634	ENSNGAG00000022056	Npm2	52	39.640	Nannospalax_galili
ENSAMXG00000038475	npm2b	54	38.889	ENSNLEG00000035765	NPM2	79	38.889	Nomascus_leucogenys
ENSAMXG00000038475	npm2b	81	37.195	ENSOPRG00000012940	NPM2	62	39.695	Ochotona_princeps
ENSAMXG00000038475	npm2b	58	44.248	ENSOANG00000020262	-	52	43.860	Ornithorhynchus_anatinus
ENSAMXG00000038475	npm2b	75	39.744	ENSOGAG00000011562	NPM2	59	39.370	Otolemur_garnettii
ENSAMXG00000038475	npm2b	76	39.355	ENSPPAG00000040749	NPM2	93	38.191	Pan_paniscus
ENSAMXG00000038475	npm2b	54	42.056	ENSPPRG00000022157	NPM2	79	42.056	Panthera_pardus
ENSAMXG00000038475	npm2b	55	40.741	ENSPTIG00000011553	NPM2	83	41.584	Panthera_tigris_altaica
ENSAMXG00000038475	npm2b	76	37.107	ENSPTRG00000020045	NPM2	93	38.191	Pan_troglodytes
ENSAMXG00000038475	npm2b	95	39.000	ENSPANG00000031080	NPM2	93	39.000	Papio_anubis
ENSAMXG00000038475	npm2b	99	61.458	ENSPKIG00000009700	npm2b	97	60.938	Paramormyrops_kingsleyae
ENSAMXG00000038475	npm2b	54	38.235	ENSPKIG00000007241	npm2a	69	38.235	Paramormyrops_kingsleyae
ENSAMXG00000038475	npm2b	58	44.643	ENSPSIG00000007722	NPM2	55	44.643	Pelodiscus_sinensis
ENSAMXG00000038475	npm2b	61	38.843	ENSPCIG00000012716	-	53	38.053	Phascolarctos_cinereus
ENSAMXG00000038475	npm2b	52	39.806	ENSPCOG00000018483	-	80	40.000	Propithecus_coquereli
ENSAMXG00000038475	npm2b	52	40.777	ENSPVAG00000009848	NPM2	50	40.777	Pteropus_vampyrus
ENSAMXG00000038475	npm2b	53	39.000	ENSPNAG00000018186	npm2a	67	39.000	Pygocentrus_nattereri
ENSAMXG00000038475	npm2b	100	87.368	ENSPNAG00000001303	npm2b	100	85.789	Pygocentrus_nattereri
ENSAMXG00000038475	npm2b	95	39.000	ENSRBIG00000029235	NPM2	93	39.000	Rhinopithecus_bieti
ENSAMXG00000038475	npm2b	95	39.000	ENSRROG00000044119	NPM2	93	39.000	Rhinopithecus_roxellana
ENSAMXG00000038475	npm2b	54	39.815	ENSSBOG00000025301	NPM2	79	39.815	Saimiri_boliviensis_boliviensis
ENSAMXG00000038475	npm2b	85	59.006	ENSSFOG00015010466	npm2b	65	63.717	Scleropages_formosus
ENSAMXG00000038475	npm2b	50	45.361	ENSSPUG00000011509	NPM2	68	45.361	Sphenodon_punctatus
ENSAMXG00000038475	npm2b	57	41.593	ENSSSCG00000009610	NPM2	61	41.593	Sus_scrofa
ENSAMXG00000038475	npm2b	94	32.828	ENSVVUG00000007256	-	66	34.000	Vulpes_vulpes
ENSAMXG00000038475	npm2b	56	38.318	ENSXETG00000016499	-	79	37.864	Xenopus_tropicalis
ENSAMXG00000038475	npm2b	99	47.938	ENSXETG00000010542	npm2	96	47.396	Xenopus_tropicalis