EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038483 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3978 bases
Position: chrAPWO02001927.1:109889-113866
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029117	RVT_1	PF00078.27	2e-21	1	1
ENSAMXP00000029117	RNase_H	PF00075.24	2.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052804	-	3978	-	ENSAMXP00000029117	1325 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038483	-	71	45.902	ENSAMXG00000040526	-	74	45.902
ENSAMXG00000038483	-	94	48.889	ENSAMXG00000038047	-	72	48.889
ENSAMXG00000038483	-	66	37.798	ENSAMXG00000033455	-	72	37.798
ENSAMXG00000038483	-	94	48.889	ENSAMXG00000040932	-	73	48.889
ENSAMXG00000038483	-	65	33.787	ENSAMXG00000033060	-	73	33.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038483	-	93	80.298	ENSAPEG00000000438	-	99	80.298	Amphiprion_percula
ENSAMXG00000038483	-	66	37.868	ENSACLG00000023027	-	70	37.868	Astatotilapia_calliptera
ENSAMXG00000038483	-	67	35.650	ENSACLG00000003782	-	64	35.650	Astatotilapia_calliptera
ENSAMXG00000038483	-	65	33.891	ENSACLG00000014318	-	63	33.891	Astatotilapia_calliptera
ENSAMXG00000038483	-	66	37.868	ENSACLG00000006254	-	62	37.868	Astatotilapia_calliptera
ENSAMXG00000038483	-	69	35.326	ENSBTAG00000052165	-	89	35.326	Bos_taurus
ENSAMXG00000038483	-	63	37.960	ENSCPBG00000009184	-	88	37.693	Chrysemys_picta_bellii
ENSAMXG00000038483	-	64	36.597	ENSCSEG00000009059	-	67	36.597	Cynoglossus_semilaevis
ENSAMXG00000038483	-	64	36.597	ENSCSEG00000012922	-	67	36.597	Cynoglossus_semilaevis
ENSAMXG00000038483	-	64	36.597	ENSCSEG00000013867	-	67	36.597	Cynoglossus_semilaevis
ENSAMXG00000038483	-	64	36.597	ENSCSEG00000011566	-	67	36.597	Cynoglossus_semilaevis
ENSAMXG00000038483	-	64	36.597	ENSCSEG00000018136	-	67	36.597	Cynoglossus_semilaevis
ENSAMXG00000038483	-	66	34.938	ENSECAG00000034459	-	79	34.938	Equus_caballus
ENSAMXG00000038483	-	66	33.785	ENSGALG00000053504	-	92	33.785	Gallus_gallus
ENSAMXG00000038483	-	66	34.149	ENSGALG00000050905	-	92	34.149	Gallus_gallus
ENSAMXG00000038483	-	66	38.014	ENSLBEG00000013565	-	63	38.014	Labrus_bergylta
ENSAMXG00000038483	-	66	35.568	ENSMAMG00000010978	-	71	35.568	Mastacembelus_armatus
ENSAMXG00000038483	-	53	39.560	ENSMODG00000028686	-	87	39.560	Monodelphis_domestica
ENSAMXG00000038483	-	73	37.647	ENSMODG00000029698	-	79	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	73	36.607	ENSMODG00000029740	-	80	36.830	Monodelphis_domestica
ENSAMXG00000038483	-	53	37.047	ENSMODG00000028692	-	96	37.326	Monodelphis_domestica
ENSAMXG00000038483	-	73	37.647	ENSMODG00000027428	-	72	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	58	42.623	ENSMODG00000028504	-	80	42.623	Monodelphis_domestica
ENSAMXG00000038483	-	62	38.462	ENSMODG00000027664	-	98	38.462	Monodelphis_domestica
ENSAMXG00000038483	-	70	44.262	ENSMODG00000027661	-	76	44.262	Monodelphis_domestica
ENSAMXG00000038483	-	73	37.647	ENSMODG00000028385	-	79	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	52	44.262	ENSMODG00000029647	-	80	44.262	Monodelphis_domestica
ENSAMXG00000038483	-	73	37.647	ENSMODG00000029722	-	80	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	73	37.647	ENSMODG00000028573	-	79	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	60	37.647	ENSMODG00000027448	-	88	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	50	38.449	ENSMODG00000028325	-	93	38.786	Monodelphis_domestica
ENSAMXG00000038483	-	62	37.647	ENSMODG00000029316	-	90	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	52	35.185	ENSMODG00000027851	-	81	35.470	Monodelphis_domestica
ENSAMXG00000038483	-	73	37.647	ENSMODG00000027641	-	79	37.647	Monodelphis_domestica
ENSAMXG00000038483	-	55	34.464	ENSONIG00000021274	-	99	34.464	Oreochromis_niloticus
ENSAMXG00000038483	-	67	35.340	ENSONIG00000021180	-	74	35.340	Oreochromis_niloticus
ENSAMXG00000038483	-	67	35.794	ENSORLG00020007796	-	58	35.794	Oryzias_latipes_hni
ENSAMXG00000038483	-	55	35.973	ENSOMEG00000005516	-	82	36.510	Oryzias_melastigma
ENSAMXG00000038483	-	72	42.254	ENSOMEG00000021132	-	65	42.254	Oryzias_melastigma
ENSAMXG00000038483	-	55	31.516	ENSOARG00000001648	-	99	31.516	Ovis_aries
ENSAMXG00000038483	-	67	34.773	ENSPSIG00000001866	-	79	35.243	Pelodiscus_sinensis
ENSAMXG00000038483	-	67	33.954	ENSSSCG00000034853	-	77	33.907	Sus_scrofa
ENSAMXG00000038483	-	61	36.015	ENSXMAG00000024544	-	84	35.970	Xiphophorus_maculatus
ENSAMXG00000038483	-	94	53.846	ENSXMAG00000022532	-	67	53.846	Xiphophorus_maculatus