EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038502 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1473 bases
Position: chrAPWO02001920.1:38585-40057
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037340	RVT_1	PF00078.27	7.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032022	-	1473	-	ENSAMXP00000037340	490 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038502	-	69	31.597	ENSAMXG00000033786	-	57	32.000
ENSAMXG00000038502	-	84	32.653	ENSAMXG00000041465	-	59	32.653
ENSAMXG00000038502	-	79	36.077	ENSAMXG00000038480	-	58	36.077
ENSAMXG00000038502	-	77	65.873	ENSAMXG00000031032	-	100	65.873
ENSAMXG00000038502	-	94	30.000	ENSAMXG00000037157	-	55	30.000
ENSAMXG00000038502	-	76	38.830	ENSAMXG00000043469	-	80	38.830
ENSAMXG00000038502	-	97	49.476	ENSAMXG00000039106	-	93	49.476
ENSAMXG00000038502	-	83	35.349	ENSAMXG00000043631	-	52	35.349
ENSAMXG00000038502	-	83	36.496	ENSAMXG00000040471	-	62	36.496
ENSAMXG00000038502	-	83	35.227	ENSAMXG00000042777	-	57	35.227
ENSAMXG00000038502	-	57	36.655	ENSAMXG00000029182	-	71	36.655
ENSAMXG00000038502	-	83	35.349	ENSAMXG00000030761	-	56	35.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038502	-	71	39.316	ENSAPOG00000008925	-	97	39.316	Acanthochromis_polyacanthus
ENSAMXG00000038502	-	90	34.968	ENSAPEG00000006765	-	72	34.968	Amphiprion_percula
ENSAMXG00000038502	-	82	52.605	ENSAPEG00000005752	-	96	52.605	Amphiprion_percula
ENSAMXG00000038502	-	95	42.612	ENSAPEG00000014949	-	68	42.612	Amphiprion_percula
ENSAMXG00000038502	-	69	47.633	ENSACLG00000013289	-	100	47.633	Astatotilapia_calliptera
ENSAMXG00000038502	-	90	48.409	ENSACLG00000009861	-	89	48.409	Astatotilapia_calliptera
ENSAMXG00000038502	-	99	58.282	ENSACLG00000001380	-	82	58.282	Astatotilapia_calliptera
ENSAMXG00000038502	-	60	36.478	ENSACLG00000006798	-	100	37.107	Astatotilapia_calliptera
ENSAMXG00000038502	-	81	34.442	ENSACLG00000005847	-	57	34.442	Astatotilapia_calliptera
ENSAMXG00000038502	-	83	35.566	ENSACLG00000012278	-	55	35.566	Astatotilapia_calliptera
ENSAMXG00000038502	-	63	39.423	ENSACLG00000010403	-	99	39.423	Astatotilapia_calliptera
ENSAMXG00000038502	-	84	32.360	ENSACLG00000005526	-	53	32.360	Astatotilapia_calliptera
ENSAMXG00000038502	-	84	33.414	ENSACLG00000020385	-	71	33.414	Astatotilapia_calliptera
ENSAMXG00000038502	-	62	35.897	ENSACLG00000006549	-	85	35.897	Astatotilapia_calliptera
ENSAMXG00000038502	-	76	47.581	ENSACLG00000013847	-	85	47.581	Astatotilapia_calliptera
ENSAMXG00000038502	-	60	37.124	ENSACLG00000021935	-	91	37.124	Astatotilapia_calliptera
ENSAMXG00000038502	-	65	52.812	ENSACLG00000007712	-	56	52.812	Astatotilapia_calliptera
ENSAMXG00000038502	-	55	33.456	ENSCPBG00000001687	-	89	33.456	Chrysemys_picta_bellii
ENSAMXG00000038502	-	82	33.578	ENSCPBG00000001369	-	72	33.578	Chrysemys_picta_bellii
ENSAMXG00000038502	-	77	40.584	ENSCPBG00000001119	-	82	40.584	Chrysemys_picta_bellii
ENSAMXG00000038502	-	56	35.125	ENSCVAG00000001415	-	74	35.125	Cyprinodon_variegatus
ENSAMXG00000038502	-	95	38.347	ENSCVAG00000019870	-	62	38.347	Cyprinodon_variegatus
ENSAMXG00000038502	-	70	31.124	ENSEBUG00000001810	-	91	31.124	Eptatretus_burgeri
ENSAMXG00000038502	-	55	34.559	ENSGAGG00000022131	-	89	34.559	Gopherus_agassizii
ENSAMXG00000038502	-	95	37.209	ENSGAGG00000022002	-	55	37.209	Gopherus_agassizii
ENSAMXG00000038502	-	54	34.831	ENSGAGG00000022000	-	95	34.831	Gopherus_agassizii
ENSAMXG00000038502	-	70	33.623	ENSGAGG00000007552	-	53	33.623	Gopherus_agassizii
ENSAMXG00000038502	-	70	38.663	ENSGAGG00000011063	-	70	38.663	Gopherus_agassizii
ENSAMXG00000038502	-	95	37.209	ENSGAGG00000007173	-	72	37.209	Gopherus_agassizii
ENSAMXG00000038502	-	82	33.578	ENSGAGG00000013650	-	72	33.578	Gopherus_agassizii
ENSAMXG00000038502	-	82	35.697	ENSGAGG00000002613	-	55	35.697	Gopherus_agassizii
ENSAMXG00000038502	-	74	71.703	ENSHBUG00000009088	-	100	71.703	Haplochromis_burtoni
ENSAMXG00000038502	-	66	35.103	ENSHBUG00000016445	-	63	35.103	Haplochromis_burtoni
ENSAMXG00000038502	-	74	40.710	ENSHCOG00000019997	-	65	40.710	Hippocampus_comes
ENSAMXG00000038502	-	93	34.839	ENSIPUG00000003645	-	94	34.839	Ictalurus_punctatus
ENSAMXG00000038502	-	84	61.446	ENSKMAG00000007574	-	81	61.446	Kryptolebias_marmoratus
ENSAMXG00000038502	-	57	33.770	ENSKMAG00000010799	-	85	33.770	Kryptolebias_marmoratus
ENSAMXG00000038502	-	96	61.915	ENSKMAG00000013568	-	59	61.915	Kryptolebias_marmoratus
ENSAMXG00000038502	-	76	41.711	ENSLBEG00000003912	-	96	41.711	Labrus_bergylta
ENSAMXG00000038502	-	78	32.412	ENSLACG00000008450	-	52	32.412	Latimeria_chalumnae
ENSAMXG00000038502	-	66	31.498	ENSLACG00000012109	-	57	31.498	Latimeria_chalumnae
ENSAMXG00000038502	-	65	34.985	ENSLACG00000003900	-	100	34.985	Latimeria_chalumnae
ENSAMXG00000038502	-	50	38.462	ENSLACG00000010373	-	100	38.462	Latimeria_chalumnae
ENSAMXG00000038502	-	74	30.769	ENSLACG00000015201	-	61	30.769	Latimeria_chalumnae
ENSAMXG00000038502	-	78	37.565	ENSLACG00000002169	-	61	37.565	Latimeria_chalumnae
ENSAMXG00000038502	-	84	33.495	ENSLACG00000001186	-	51	33.495	Latimeria_chalumnae
ENSAMXG00000038502	-	53	36.122	ENSLACG00000002249	-	98	36.122	Latimeria_chalumnae
ENSAMXG00000038502	-	62	35.806	ENSLACG00000001892	-	89	35.806	Latimeria_chalumnae
ENSAMXG00000038502	-	83	39.329	ENSLACG00000009168	-	61	35.252	Latimeria_chalumnae
ENSAMXG00000038502	-	76	35.917	ENSLACG00000006413	-	55	35.917	Latimeria_chalumnae
ENSAMXG00000038502	-	66	35.976	ENSLACG00000009347	-	53	35.976	Latimeria_chalumnae
ENSAMXG00000038502	-	83	34.048	ENSLACG00000006151	-	55	34.048	Latimeria_chalumnae
ENSAMXG00000038502	-	67	34.545	ENSLOCG00000017292	-	100	34.545	Lepisosteus_oculatus
ENSAMXG00000038502	-	97	36.907	ENSMAMG00000019918	-	78	36.907	Mastacembelus_armatus
ENSAMXG00000038502	-	56	36.996	ENSMAMG00000004646	-	58	36.996	Mastacembelus_armatus
ENSAMXG00000038502	-	83	36.047	ENSMAMG00000016004	-	64	36.047	Mastacembelus_armatus
ENSAMXG00000038502	-	90	49.318	ENSMZEG00005023829	-	89	49.318	Maylandia_zebra
ENSAMXG00000038502	-	84	32.135	ENSMZEG00005004899	-	54	32.135	Maylandia_zebra
ENSAMXG00000038502	-	87	35.104	ENSMZEG00005024252	-	50	35.104	Maylandia_zebra
ENSAMXG00000038502	-	82	36.634	ENSMZEG00005008378	-	55	36.634	Maylandia_zebra
ENSAMXG00000038502	-	83	35.417	ENSMZEG00005017878	-	66	35.417	Maylandia_zebra
ENSAMXG00000038502	-	58	41.754	ENSMALG00000005075	-	89	41.754	Monopterus_albus
ENSAMXG00000038502	-	55	48.708	ENSMALG00000020245	-	99	48.708	Monopterus_albus
ENSAMXG00000038502	-	61	42.244	ENSNBRG00000002791	-	98	42.244	Neolamprologus_brichardi
ENSAMXG00000038502	-	69	75.074	ENSNBRG00000002477	-	99	75.074	Neolamprologus_brichardi
ENSAMXG00000038502	-	53	31.179	ENSONIG00000018991	-	92	31.179	Oreochromis_niloticus
ENSAMXG00000038502	-	74	39.892	ENSORLG00000023794	-	68	39.892	Oryzias_latipes
ENSAMXG00000038502	-	95	36.842	ENSORLG00000023615	-	52	36.842	Oryzias_latipes
ENSAMXG00000038502	-	99	36.917	ENSORLG00000028879	-	52	36.917	Oryzias_latipes
ENSAMXG00000038502	-	73	48.189	ENSORLG00000027443	-	61	48.189	Oryzias_latipes
ENSAMXG00000038502	-	56	35.986	ENSORLG00000022742	-	77	35.986	Oryzias_latipes
ENSAMXG00000038502	-	62	34.426	ENSORLG00000022411	-	84	34.426	Oryzias_latipes
ENSAMXG00000038502	-	81	46.599	ENSORLG00000027869	-	87	46.599	Oryzias_latipes
ENSAMXG00000038502	-	98	68.542	ENSORLG00000027231	-	91	68.542	Oryzias_latipes
ENSAMXG00000038502	-	71	50.716	ENSORLG00020000154	-	86	50.716	Oryzias_latipes_hni
ENSAMXG00000038502	-	92	46.681	ENSORLG00020009127	-	89	46.681	Oryzias_latipes_hni
ENSAMXG00000038502	-	89	37.613	ENSORLG00020009084	-	59	37.613	Oryzias_latipes_hni
ENSAMXG00000038502	-	61	41.584	ENSORLG00020021288	-	94	41.584	Oryzias_latipes_hni
ENSAMXG00000038502	-	88	36.902	ENSORLG00020000592	-	52	36.902	Oryzias_latipes_hni
ENSAMXG00000038502	-	78	35.340	ENSORLG00020016695	-	51	35.340	Oryzias_latipes_hni
ENSAMXG00000038502	-	87	37.644	ENSORLG00020016924	-	100	37.644	Oryzias_latipes_hni
ENSAMXG00000038502	-	65	59.062	ENSORLG00020016252	-	85	59.062	Oryzias_latipes_hni
ENSAMXG00000038502	-	56	35.640	ENSORLG00020004454	-	73	35.640	Oryzias_latipes_hni
ENSAMXG00000038502	-	96	53.503	ENSORLG00020019030	-	57	53.503	Oryzias_latipes_hni
ENSAMXG00000038502	-	96	47.761	ENSORLG00020002002	-	74	47.761	Oryzias_latipes_hni
ENSAMXG00000038502	-	81	50.253	ENSORLG00020012706	-	100	50.253	Oryzias_latipes_hni
ENSAMXG00000038502	-	55	38.519	ENSORLG00020002705	-	84	38.519	Oryzias_latipes_hni
ENSAMXG00000038502	-	90	38.497	ENSORLG00015008138	-	83	38.497	Oryzias_latipes_hsok
ENSAMXG00000038502	-	91	50.336	ENSORLG00015013369	-	59	50.336	Oryzias_latipes_hsok
ENSAMXG00000038502	-	96	47.548	ENSORLG00015022314	-	55	47.548	Oryzias_latipes_hsok
ENSAMXG00000038502	-	77	76.984	ENSORLG00015021822	-	100	76.984	Oryzias_latipes_hsok
ENSAMXG00000038502	-	71	47.851	ENSORLG00015009803	-	73	47.851	Oryzias_latipes_hsok
ENSAMXG00000038502	-	74	45.479	ENSORLG00015010510	-	59	45.479	Oryzias_latipes_hsok
ENSAMXG00000038502	-	81	33.417	ENSORLG00015013109	-	63	33.417	Oryzias_latipes_hsok
ENSAMXG00000038502	-	95	35.244	ENSOMEG00000005634	-	63	35.244	Oryzias_melastigma
ENSAMXG00000038502	-	57	33.803	ENSOMEG00000007764	-	96	33.803	Oryzias_melastigma
ENSAMXG00000038502	-	81	34.913	ENSOMEG00000013479	-	65	34.913	Oryzias_melastigma
ENSAMXG00000038502	-	88	39.030	ENSOMEG00000013073	-	70	39.030	Oryzias_melastigma
ENSAMXG00000038502	-	75	71.311	ENSOMEG00000013437	-	63	71.311	Oryzias_melastigma
ENSAMXG00000038502	-	83	39.759	ENSPKIG00000013778	-	56	39.759	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	88	59.302	ENSPKIG00000007140	-	98	59.302	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	61	34.462	ENSPKIG00000003982	-	63	34.462	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	84	38.369	ENSPKIG00000015048	-	60	38.369	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	81	32.553	ENSPKIG00000012990	-	62	32.553	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	60	34.483	ENSPKIG00000004057	-	71	34.483	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	57	38.790	ENSPKIG00000019619	-	99	38.790	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	83	37.198	ENSPKIG00000005406	-	69	37.198	Paramormyrops_kingsleyae
ENSAMXG00000038502	-	61	39.867	ENSPSIG00000000007	-	75	39.867	Pelodiscus_sinensis
ENSAMXG00000038502	-	82	36.520	ENSPSIG00000001150	-	56	36.105	Pelodiscus_sinensis
ENSAMXG00000038502	-	60	38.462	ENSPSIG00000002033	-	91	38.462	Pelodiscus_sinensis
ENSAMXG00000038502	-	70	36.232	ENSPSIG00000001249	-	99	36.232	Pelodiscus_sinensis
ENSAMXG00000038502	-	71	37.500	ENSPSIG00000000367	-	79	37.500	Pelodiscus_sinensis
ENSAMXG00000038502	-	51	35.458	ENSPSIG00000001816	-	94	35.458	Pelodiscus_sinensis
ENSAMXG00000038502	-	82	36.790	ENSPSIG00000001757	-	99	36.790	Pelodiscus_sinensis
ENSAMXG00000038502	-	82	36.453	ENSPSIG00000001197	-	99	36.453	Pelodiscus_sinensis
ENSAMXG00000038502	-	71	36.494	ENSPSIG00000001800	-	77	36.494	Pelodiscus_sinensis
ENSAMXG00000038502	-	64	36.076	ENSPSIG00000014032	-	92	36.076	Pelodiscus_sinensis
ENSAMXG00000038502	-	82	37.685	ENSPSIG00000001205	-	87	37.685	Pelodiscus_sinensis
ENSAMXG00000038502	-	82	37.562	ENSPSIG00000001614	-	57	37.562	Pelodiscus_sinensis
ENSAMXG00000038502	-	70	34.286	ENSPSIG00000001136	-	71	34.286	Pelodiscus_sinensis
ENSAMXG00000038502	-	83	34.360	ENSPSIG00000000226	-	83	33.996	Pelodiscus_sinensis
ENSAMXG00000038502	-	81	37.905	ENSPSIG00000000193	-	79	37.905	Pelodiscus_sinensis
ENSAMXG00000038502	-	64	38.730	ENSPMEG00000017235	-	54	38.690	Poecilia_mexicana
ENSAMXG00000038502	-	81	53.000	ENSPMEG00000018862	-	81	53.000	Poecilia_mexicana
ENSAMXG00000038502	-	69	37.791	ENSPMEG00000019465	-	75	37.791	Poecilia_mexicana
ENSAMXG00000038502	-	83	35.784	ENSPREG00000006122	-	53	35.784	Poecilia_reticulata
ENSAMXG00000038502	-	62	34.641	ENSPREG00000005117	-	66	34.641	Poecilia_reticulata
ENSAMXG00000038502	-	78	34.250	ENSPREG00000006496	-	54	34.250	Poecilia_reticulata
ENSAMXG00000038502	-	68	51.360	ENSPREG00000022349	-	71	51.360	Poecilia_reticulata
ENSAMXG00000038502	-	62	35.082	ENSPREG00000006650	-	55	35.082	Poecilia_reticulata
ENSAMXG00000038502	-	61	71.572	ENSPNYG00000004598	-	100	71.572	Pundamilia_nyererei
ENSAMXG00000038502	-	90	34.967	ENSPNAG00000009058	-	89	34.967	Pygocentrus_nattereri
ENSAMXG00000038502	-	78	49.479	ENSPNAG00000015949	-	99	49.479	Pygocentrus_nattereri
ENSAMXG00000038502	-	95	36.152	ENSPNAG00000010299	-	91	36.152	Pygocentrus_nattereri
ENSAMXG00000038502	-	82	35.506	ENSSFOG00015024061	-	71	35.506	Scleropages_formosus
ENSAMXG00000038502	-	61	34.564	ENSSFOG00015015399	-	85	34.564	Scleropages_formosus
ENSAMXG00000038502	-	69	39.306	ENSSFOG00015016168	-	77	39.306	Scleropages_formosus
ENSAMXG00000038502	-	66	55.657	ENSSPAG00000008169	-	53	55.657	Stegastes_partitus
ENSAMXG00000038502	-	71	36.364	ENSTRUG00000024803	-	68	36.364	Takifugu_rubripes
ENSAMXG00000038502	-	51	36.364	ENSTRUG00000024970	-	82	36.364	Takifugu_rubripes
ENSAMXG00000038502	-	81	71.429	ENSXMAG00000025957	-	70	71.429	Xiphophorus_maculatus
ENSAMXG00000038502	-	62	35.758	ENSXMAG00000027711	-	99	35.758	Xiphophorus_maculatus
ENSAMXG00000038502	-	77	41.623	ENSXMAG00000023507	-	74	41.623	Xiphophorus_maculatus