EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038534 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1089 bases
Position: chr14:28784123-28785211
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036073	MMR_HSR1	PF01926.23	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042653	-	918	-	ENSAMXP00000036073	305 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038534	-	89	44.985	ENSAMXG00000041276	-	77	46.984
ENSAMXG00000038534	-	86	47.403	ENSAMXG00000018938	-	83	47.134
ENSAMXG00000038534	-	52	63.125	ENSAMXG00000043797	-	69	59.538
ENSAMXG00000038534	-	81	44.257	ENSAMXG00000037767	-	79	43.369
ENSAMXG00000038534	-	90	51.360	ENSAMXG00000025169	-	82	52.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038534	-	62	39.801	ENSACIG00000008165	-	61	44.937	Amphilophus_citrinellus
ENSAMXG00000038534	-	66	34.562	ENSATEG00000011665	-	73	35.500	Anabas_testudineus
ENSAMXG00000038534	-	58	39.683	ENSACLG00000026716	-	55	43.210	Astatotilapia_calliptera
ENSAMXG00000038534	-	64	37.681	ENSACLG00000026694	-	83	37.561	Astatotilapia_calliptera
ENSAMXG00000038534	-	57	64.706	ENSGMOG00000000661	-	74	41.530	Gadus_morhua
ENSAMXG00000038534	-	58	40.556	ENSGMOG00000014685	-	55	44.025	Gadus_morhua
ENSAMXG00000038534	-	52	47.887	ENSHBUG00000006760	-	51	47.887	Haplochromis_burtoni
ENSAMXG00000038534	-	52	49.412	ENSHBUG00000007885	-	58	50.633	Haplochromis_burtoni
ENSAMXG00000038534	-	69	50.226	ENSIPUG00000022382	IRGC	57	50.226	Ictalurus_punctatus
ENSAMXG00000038534	-	52	44.444	ENSLBEG00000005277	-	66	43.902	Labrus_bergylta
ENSAMXG00000038534	-	65	41.079	ENSLBEG00000005332	-	61	40.773	Labrus_bergylta
ENSAMXG00000038534	-	67	38.889	ENSLBEG00000005443	-	59	36.937	Labrus_bergylta
ENSAMXG00000038534	-	61	42.408	ENSLBEG00000014554	-	53	55.172	Labrus_bergylta
ENSAMXG00000038534	-	82	48.611	ENSLBEG00000024117	-	52	55.172	Labrus_bergylta
ENSAMXG00000038534	-	52	45.029	ENSLBEG00000014508	-	63	37.553	Labrus_bergylta
ENSAMXG00000038534	-	52	45.614	ENSLBEG00000005157	-	59	45.399	Labrus_bergylta
ENSAMXG00000038534	-	65	34.413	ENSLBEG00000010876	-	65	34.335	Labrus_bergylta
ENSAMXG00000038534	-	51	42.515	ENSMZEG00005013284	-	64	42.593	Maylandia_zebra
ENSAMXG00000038534	-	52	41.420	ENSMZEG00005027737	-	59	42.949	Maylandia_zebra
ENSAMXG00000038534	-	79	31.599	ENSMMOG00000018247	irgf3	72	32.677	Mola_mola
ENSAMXG00000038534	-	57	39.655	ENSMUSG00000078920	Ifi47	56	48.649	Mus_musculus
ENSAMXG00000038534	-	57	46.067	ENSNBRG00000007782	-	76	47.059	Neolamprologus_brichardi
ENSAMXG00000038534	-	52	41.176	ENSNBRG00000012048	-	87	41.875	Neolamprologus_brichardi
ENSAMXG00000038534	-	50	47.904	ENSNBRG00000001731	-	69	53.191	Neolamprologus_brichardi
ENSAMXG00000038534	-	53	40.341	ENSOANG00000001820	-	52	42.038	Ornithorhynchus_anatinus
ENSAMXG00000038534	-	50	41.520	ENSPSIG00000008699	-	57	41.667	Pelodiscus_sinensis
ENSAMXG00000038534	-	62	39.583	ENSPMGG00000023541	-	75	37.766	Periophthalmus_magnuspinnatus
ENSAMXG00000038534	-	70	39.648	ENSPMGG00000022164	-	81	40.187	Periophthalmus_magnuspinnatus
ENSAMXG00000038534	-	59	39.583	ENSPLAG00000016196	-	64	43.949	Poecilia_latipinna
ENSAMXG00000038534	-	52	41.176	ENSPMEG00000011302	-	64	43.312	Poecilia_mexicana
ENSAMXG00000038534	-	57	37.778	ENSPREG00000004310	-	87	37.778	Poecilia_reticulata
ENSAMXG00000038534	-	54	48.315	ENSPNYG00000021508	-	52	54.610	Pundamilia_nyererei
ENSAMXG00000038534	-	71	44.444	ENSPNAG00000012840	-	62	44.444	Pygocentrus_nattereri
ENSAMXG00000038534	-	90	42.202	ENSPNAG00000007452	-	82	41.720	Pygocentrus_nattereri
ENSAMXG00000038534	-	80	43.846	ENSPNAG00000028650	-	77	37.063	Pygocentrus_nattereri
ENSAMXG00000038534	-	81	41.438	ENSPNAG00000029024	-	76	51.892	Pygocentrus_nattereri
ENSAMXG00000038534	-	68	46.032	ENSPNAG00000012863	-	69	46.032	Pygocentrus_nattereri
ENSAMXG00000038534	-	53	68.493	ENSPNAG00000000207	-	65	67.123	Pygocentrus_nattereri