EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038560 (Gene tree)
Gene ID: 103047074
Gene Symbol: -
Alias: -
Full Name: activated RNA polymerase II transcriptional coactivator p15-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7037 bases
Position: chr20:17531271-17538307
Accession: 103047074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000031768	PC4	PF02229.16	3.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032525	-	2007	XM_007228833	ENSAMXP00000031768	126 (aa)	XP_007228895	W5LHT5

Gene Model

Click here to download ENSAMXG00000038560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038560	-	100	80.159	ENSAMXG00000037104	sub1b	100	80.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038560	-	99	53.968	ENSCPBG00000010898	-	99	52.000	Chrysemys_picta_bellii
ENSAMXG00000038560	-	99	41.221	ENSCING00000017560	-	51	47.619	Ciona_intestinalis
ENSAMXG00000038560	-	100	74.603	ENSCSEG00000009205	-	99	75.200	Cynoglossus_semilaevis
ENSAMXG00000038560	-	100	73.810	ENSCSEG00000011154	-	99	74.400	Cynoglossus_semilaevis
ENSAMXG00000038560	-	98	79.839	ENSCVAG00000021573	-	72	79.839	Cyprinodon_variegatus
ENSAMXG00000038560	-	68	74.419	ENSDORG00000026076	-	99	65.079	Dipodomys_ordii
ENSAMXG00000038560	-	98	73.438	ENSELUG00000005136	TCP4	98	68.750	Esox_lucius
ENSAMXG00000038560	-	100	67.442	ENSELUG00000022688	sub1	99	64.844	Esox_lucius
ENSAMXG00000038560	-	100	71.429	ENSGMOG00000011659	-	99	72.000	Gadus_morhua
ENSAMXG00000038560	-	100	78.571	ENSGAFG00000016251	-	99	80.000	Gambusia_affinis
ENSAMXG00000038560	-	100	80.159	ENSKMAG00000013670	-	99	80.800	Kryptolebias_marmoratus
ENSAMXG00000038560	-	100	75.397	ENSMMOG00000008698	-	100	75.397	Mola_mola
ENSAMXG00000038560	-	100	65.079	ENSNGAG00000001935	-	82	60.800	Nannospalax_galili
ENSAMXG00000038560	-	99	64.800	ENSODEG00000004776	-	99	64.800	Octodon_degus
ENSAMXG00000038560	-	100	75.397	ENSONIG00000013958	-	99	76.000	Oreochromis_niloticus
ENSAMXG00000038560	-	100	76.984	ENSORLG00000017237	sub1	100	76.984	Oryzias_latipes
ENSAMXG00000038560	-	100	76.984	ENSORLG00020014865	sub1	100	76.984	Oryzias_latipes_hni
ENSAMXG00000038560	-	100	76.984	ENSORLG00015005820	sub1	100	76.984	Oryzias_latipes_hsok
ENSAMXG00000038560	-	100	77.778	ENSOMEG00000003351	-	100	77.778	Oryzias_melastigma
ENSAMXG00000038560	-	100	76.378	ENSPMGG00000017654	-	100	76.378	Periophthalmus_magnuspinnatus
ENSAMXG00000038560	-	100	78.571	ENSPFOG00000017101	-	99	80.000	Poecilia_formosa
ENSAMXG00000038560	-	100	78.571	ENSPLAG00000015088	-	99	80.000	Poecilia_latipinna
ENSAMXG00000038560	-	100	78.571	ENSPMEG00000023692	-	99	80.000	Poecilia_mexicana
ENSAMXG00000038560	-	100	78.571	ENSPREG00000011918	-	99	80.000	Poecilia_reticulata
ENSAMXG00000038560	-	100	77.778	ENSXCOG00000009356	-	99	79.200	Xiphophorus_couchianus
ENSAMXG00000038560	-	100	77.778	ENSXMAG00000013353	-	99	79.200	Xiphophorus_maculatus