EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4740 bases
Position: chrAPWO02001022.1:118636-123375
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036019	RVT_1	PF00078.27	1.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000051014	-	4740	-	ENSAMXP00000036019	1342 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038578	-	62	34.799	ENSAMXG00000038338	-	63	34.799
ENSAMXG00000038578	-	55	35.476	ENSAMXG00000033138	-	52	35.476
ENSAMXG00000038578	-	67	32.661	ENSAMXG00000040885	-	71	32.661
ENSAMXG00000038578	-	65	37.931	ENSAMXG00000030987	-	58	38.876
ENSAMXG00000038578	-	57	39.271	ENSAMXG00000035335	-	58	39.271
ENSAMXG00000038578	-	65	37.991	ENSAMXG00000029230	-	58	37.991
ENSAMXG00000038578	-	56	34.815	ENSAMXG00000040695	-	53	34.815
ENSAMXG00000038578	-	67	36.345	ENSAMXG00000032559	-	82	36.345
ENSAMXG00000038578	-	62	32.777	ENSAMXG00000032783	-	63	32.777
ENSAMXG00000038578	-	57	35.266	ENSAMXG00000042521	-	60	35.266
ENSAMXG00000038578	-	60	35.992	ENSAMXG00000043385	-	64	35.992
ENSAMXG00000038578	-	54	36.093	ENSAMXG00000038033	-	78	36.093
ENSAMXG00000038578	-	99	60.133	ENSAMXG00000031698	-	85	60.280
ENSAMXG00000038578	-	55	37.665	ENSAMXG00000030479	-	54	37.665
ENSAMXG00000038578	-	55	34.590	ENSAMXG00000041369	-	64	34.590
ENSAMXG00000038578	-	59	36.238	ENSAMXG00000033912	-	65	36.238
ENSAMXG00000038578	-	58	37.732	ENSAMXG00000038531	-	58	37.732
ENSAMXG00000038578	-	53	30.000	ENSAMXG00000030908	-	63	30.116
ENSAMXG00000038578	-	50	31.323	ENSAMXG00000041082	-	51	31.323
ENSAMXG00000038578	-	57	35.088	ENSAMXG00000039110	-	56	35.088
ENSAMXG00000038578	-	65	34.766	ENSAMXG00000039114	-	89	34.766
ENSAMXG00000038578	-	91	53.485	ENSAMXG00000030902	-	86	53.485
ENSAMXG00000038578	-	50	38.117	ENSAMXG00000037673	-	78	38.117
ENSAMXG00000038578	-	51	36.577	ENSAMXG00000038310	-	75	36.577
ENSAMXG00000038578	-	61	34.279	ENSAMXG00000032571	-	59	34.279
ENSAMXG00000038578	-	60	35.352	ENSAMXG00000037864	-	72	35.352
ENSAMXG00000038578	-	58	33.403	ENSAMXG00000032330	-	54	33.403
ENSAMXG00000038578	-	62	34.222	ENSAMXG00000038997	-	54	34.222
ENSAMXG00000038578	-	62	34.222	ENSAMXG00000043312	-	54	34.222
ENSAMXG00000038578	-	65	40.161	ENSAMXG00000038169	-	67	40.413
ENSAMXG00000038578	-	99	69.412	ENSAMXG00000040892	-	86	69.559
ENSAMXG00000038578	-	60	33.477	ENSAMXG00000040149	-	52	33.477
ENSAMXG00000038578	-	56	71.921	ENSAMXG00000043892	-	96	72.105
ENSAMXG00000038578	-	66	55.422	ENSAMXG00000041112	-	78	55.422
ENSAMXG00000038578	-	53	35.904	ENSAMXG00000031305	-	72	35.904
ENSAMXG00000038578	-	66	39.451	ENSAMXG00000034382	-	77	39.451
ENSAMXG00000038578	-	52	34.286	ENSAMXG00000036113	-	65	34.286
ENSAMXG00000038578	-	63	33.553	ENSAMXG00000030022	-	72	33.553

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038578	-	87	36.824	ENSAPOG00000012135	-	98	36.824	Acanthochromis_polyacanthus
ENSAMXG00000038578	-	69	40.087	ENSAPOG00000008045	-	94	40.087	Acanthochromis_polyacanthus
ENSAMXG00000038578	-	99	56.652	ENSACLG00000014870	-	86	56.652	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	32.807	ENSACLG00000014619	-	89	32.807	Astatotilapia_calliptera
ENSAMXG00000038578	-	54	37.636	ENSACLG00000000367	-	80	37.636	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	32.807	ENSACLG00000019876	-	88	32.807	Astatotilapia_calliptera
ENSAMXG00000038578	-	83	30.308	ENSACLG00000010042	-	87	30.308	Astatotilapia_calliptera
ENSAMXG00000038578	-	96	60.363	ENSACLG00000018060	-	85	60.363	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	56.725	ENSACLG00000017808	-	86	56.725	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	33.788	ENSACLG00000024091	-	87	33.788	Astatotilapia_calliptera
ENSAMXG00000038578	-	55	38.830	ENSACLG00000004062	-	99	38.830	Astatotilapia_calliptera
ENSAMXG00000038578	-	69	59.765	ENSACLG00000018181	-	99	59.765	Astatotilapia_calliptera
ENSAMXG00000038578	-	100	47.025	ENSACLG00000002180	-	89	47.498	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	33.694	ENSACLG00000017161	-	87	33.694	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	33.931	ENSACLG00000009628	-	87	33.931	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	56.318	ENSACLG00000013572	-	85	56.318	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	34.003	ENSACLG00000025719	-	87	34.003	Astatotilapia_calliptera
ENSAMXG00000038578	-	60	39.777	ENSACLG00000007343	-	97	39.777	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	56.601	ENSACLG00000027291	-	86	56.601	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	33.068	ENSACLG00000026879	-	88	33.068	Astatotilapia_calliptera
ENSAMXG00000038578	-	68	38.024	ENSACLG00000027730	-	80	37.957	Astatotilapia_calliptera
ENSAMXG00000038578	-	99	56.579	ENSACLG00000000499	-	86	56.579	Astatotilapia_calliptera
ENSAMXG00000038578	-	56	39.470	ENSACLG00000008862	-	99	39.470	Astatotilapia_calliptera
ENSAMXG00000038578	-	61	37.274	ENSCPBG00000011626	-	98	37.274	Chrysemys_picta_bellii
ENSAMXG00000038578	-	60	57.073	ENSCVAG00000009912	-	99	57.073	Cyprinodon_variegatus
ENSAMXG00000038578	-	84	57.726	ENSELUG00000000948	-	97	57.726	Esox_lucius
ENSAMXG00000038578	-	73	30.685	ENSFHEG00000000971	-	84	30.685	Fundulus_heteroclitus
ENSAMXG00000038578	-	56	37.881	ENSGAFG00000009062	-	98	37.881	Gambusia_affinis
ENSAMXG00000038578	-	61	39.188	ENSGAGG00000020521	-	99	39.188	Gopherus_agassizii
ENSAMXG00000038578	-	77	32.649	ENSGAGG00000025282	-	99	31.488	Gopherus_agassizii
ENSAMXG00000038578	-	68	40.152	ENSGAGG00000014450	-	82	40.152	Gopherus_agassizii
ENSAMXG00000038578	-	61	39.188	ENSGAGG00000012039	-	99	39.188	Gopherus_agassizii
ENSAMXG00000038578	-	69	38.789	ENSGAGG00000022240	-	58	38.789	Gopherus_agassizii
ENSAMXG00000038578	-	64	38.721	ENSIPUG00000000601	-	93	38.721	Ictalurus_punctatus
ENSAMXG00000038578	-	79	55.333	ENSMAMG00000018393	-	100	55.333	Mastacembelus_armatus
ENSAMXG00000038578	-	78	57.830	ENSMZEG00005000633	-	99	57.830	Maylandia_zebra
ENSAMXG00000038578	-	50	37.758	ENSMALG00000019305	-	99	37.758	Monopterus_albus
ENSAMXG00000038578	-	99	35.113	ENSORLG00000025739	-	87	35.113	Oryzias_latipes
ENSAMXG00000038578	-	99	56.204	ENSORLG00000026873	-	86	56.204	Oryzias_latipes
ENSAMXG00000038578	-	99	56.287	ENSORLG00000029675	-	86	56.360	Oryzias_latipes
ENSAMXG00000038578	-	99	34.624	ENSORLG00000024904	-	88	34.624	Oryzias_latipes
ENSAMXG00000038578	-	99	56.433	ENSORLG00000029874	-	86	56.433	Oryzias_latipes
ENSAMXG00000038578	-	99	35.290	ENSORLG00000027568	-	87	35.290	Oryzias_latipes
ENSAMXG00000038578	-	99	34.321	ENSORLG00000026546	-	87	34.321	Oryzias_latipes
ENSAMXG00000038578	-	99	34.942	ENSORLG00000026665	-	87	34.942	Oryzias_latipes
ENSAMXG00000038578	-	93	34.911	ENSORLG00000022369	-	86	34.911	Oryzias_latipes
ENSAMXG00000038578	-	99	34.996	ENSORLG00000028795	-	87	34.996	Oryzias_latipes
ENSAMXG00000038578	-	99	34.956	ENSORLG00000030542	-	87	34.956	Oryzias_latipes
ENSAMXG00000038578	-	69	59.465	ENSORLG00000026676	-	96	59.465	Oryzias_latipes
ENSAMXG00000038578	-	99	55.982	ENSORLG00000026629	-	86	55.982	Oryzias_latipes
ENSAMXG00000038578	-	99	34.956	ENSORLG00000028609	-	87	34.956	Oryzias_latipes
ENSAMXG00000038578	-	99	34.596	ENSORLG00000024220	-	87	34.596	Oryzias_latipes
ENSAMXG00000038578	-	79	53.932	ENSORLG00000028632	-	99	54.182	Oryzias_latipes
ENSAMXG00000038578	-	99	35.113	ENSORLG00000030265	-	87	35.113	Oryzias_latipes
ENSAMXG00000038578	-	99	56.130	ENSORLG00000023181	-	86	56.130	Oryzias_latipes
ENSAMXG00000038578	-	99	33.926	ENSORLG00000027831	-	89	33.926	Oryzias_latipes
ENSAMXG00000038578	-	57	39.062	ENSORLG00000025478	-	97	39.062	Oryzias_latipes
ENSAMXG00000038578	-	99	34.722	ENSORLG00000024233	-	87	34.722	Oryzias_latipes
ENSAMXG00000038578	-	99	34.195	ENSORLG00020020268	-	87	34.195	Oryzias_latipes_hni
ENSAMXG00000038578	-	99	34.655	ENSORLG00020001422	-	87	34.655	Oryzias_latipes_hni
ENSAMXG00000038578	-	99	34.478	ENSORLG00020003869	-	86	34.478	Oryzias_latipes_hni
ENSAMXG00000038578	-	99	34.478	ENSORLG00020014203	-	86	34.478	Oryzias_latipes_hni
ENSAMXG00000038578	-	99	35.040	ENSORLG00020008293	-	87	35.040	Oryzias_latipes_hni
ENSAMXG00000038578	-	99	35.141	ENSORLG00015018878	-	87	35.141	Oryzias_latipes_hsok
ENSAMXG00000038578	-	99	35.141	ENSORLG00015017778	-	87	35.141	Oryzias_latipes_hsok
ENSAMXG00000038578	-	99	56.582	ENSOMEG00000009987	-	89	56.582	Oryzias_melastigma
ENSAMXG00000038578	-	50	50.880	ENSOMEG00000006705	-	93	50.880	Oryzias_melastigma
ENSAMXG00000038578	-	99	34.877	ENSOMEG00000003712	-	87	34.877	Oryzias_melastigma
ENSAMXG00000038578	-	50	53.608	ENSPKIG00000000391	-	99	53.608	Paramormyrops_kingsleyae
ENSAMXG00000038578	-	57	38.422	ENSPSIG00000013781	-	100	38.422	Pelodiscus_sinensis
ENSAMXG00000038578	-	98	32.837	ENSPSIG00000000994	-	92	32.986	Pelodiscus_sinensis
ENSAMXG00000038578	-	69	37.728	ENSPSIG00000000353	-	79	37.728	Pelodiscus_sinensis
ENSAMXG00000038578	-	99	32.534	ENSPSIG00000000489	-	90	32.115	Pelodiscus_sinensis
ENSAMXG00000038578	-	98	31.901	ENSPSIG00000000767	-	94	31.901	Pelodiscus_sinensis
ENSAMXG00000038578	-	62	39.333	ENSPSIG00000001658	-	94	39.333	Pelodiscus_sinensis
ENSAMXG00000038578	-	59	39.950	ENSPMEG00000019585	-	99	39.950	Poecilia_mexicana
ENSAMXG00000038578	-	90	32.938	ENSPMEG00000016355	-	99	32.938	Poecilia_mexicana
ENSAMXG00000038578	-	99	52.230	ENSPREG00000000390	-	87	52.230	Poecilia_reticulata
ENSAMXG00000038578	-	99	51.232	ENSPREG00000004954	-	89	51.659	Poecilia_reticulata
ENSAMXG00000038578	-	93	33.719	ENSSDUG00000002460	-	99	33.693	Seriola_dumerili
ENSAMXG00000038578	-	59	30.024	ENSSLDG00000004385	-	82	30.072	Seriola_lalandi_dorsalis
ENSAMXG00000038578	-	99	47.287	ENSXMAG00000023079	-	87	47.287	Xiphophorus_maculatus
ENSAMXG00000038578	-	99	34.545	ENSXMAG00000026031	-	88	34.691	Xiphophorus_maculatus
ENSAMXG00000038578	-	99	49.084	ENSXMAG00000026594	-	88	49.084	Xiphophorus_maculatus
ENSAMXG00000038578	-	99	47.287	ENSXMAG00000023503	-	87	47.287	Xiphophorus_maculatus
ENSAMXG00000038578	-	99	58.022	ENSXMAG00000021298	-	85	58.022	Xiphophorus_maculatus
ENSAMXG00000038578	-	79	51.210	ENSXMAG00000030089	-	99	51.210	Xiphophorus_maculatus
ENSAMXG00000038578	-	99	49.084	ENSXMAG00000021213	-	88	49.084	Xiphophorus_maculatus
ENSAMXG00000038578	-	99	58.180	ENSXMAG00000023319	-	85	58.180	Xiphophorus_maculatus
ENSAMXG00000038578	-	93	34.394	ENSXMAG00000030100	-	88	34.394	Xiphophorus_maculatus