EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038693 (Gene tree)
Gene ID: 103034441
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 17716 bases
Position: chrAPWO02000153.1:370877-388592
Accession: 103034441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038917	MMR_HSR1	PF01926.23	2.5e-09	1	1
ENSAMXP00000034423	MMR_HSR1	PF01926.23	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040508	SRL (1 of many)-201	1509	-	ENSAMXP00000038917	453 (aa)	-	-
ENSAMXT00000050862	SRL (1 of many)-202	1927	XM_022668638	ENSAMXP00000034423	598 (aa)	XP_022524359	-

Gene Model

Click here to download ENSAMXG00000038693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038693	SRL	78	32.773	ENSAMXG00000013748	ehd2a	63	33.241
ENSAMXG00000038693	SRL	87	30.730	ENSAMXG00000031892	-	72	30.730
ENSAMXG00000038693	SRL	66	37.086	ENSAMXG00000008348	ehd4	55	37.086
ENSAMXG00000038693	SRL	66	37.584	ENSAMXG00000042972	ehd3	61	37.584
ENSAMXG00000038693	SRL	99	73.673	ENSAMXG00000018789	srl	82	77.327
ENSAMXG00000038693	SRL	93	30.969	ENSAMXG00000039344	ehd1a	72	31.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038693	SRL	100	73.510	ENSG00000185739	SRL	94	78.164	Homo_sapiens
ENSAMXG00000038693	SRL	100	75.055	ENSAPOG00000018093	srl	94	78.998	Acanthochromis_polyacanthus
ENSAMXG00000038693	SRL	100	78.808	ENSAPOG00000012432	SRL	94	82.494	Acanthochromis_polyacanthus
ENSAMXG00000038693	SRL	100	73.951	ENSACIG00000015799	srl	93	77.857	Amphilophus_citrinellus
ENSAMXG00000038693	SRL	100	77.483	ENSACIG00000015419	SRL	98	77.263	Amphilophus_citrinellus
ENSAMXG00000038693	SRL	98	74.775	ENSAOCG00000007574	srl	95	78.832	Amphiprion_ocellaris
ENSAMXG00000038693	SRL	100	79.029	ENSAOCG00000017049	SRL	90	82.933	Amphiprion_ocellaris
ENSAMXG00000038693	SRL	100	75.276	ENSAPEG00000006533	SRL	90	80.048	Amphiprion_percula
ENSAMXG00000038693	SRL	100	74.834	ENSAPEG00000006911	srl	93	75.399	Amphiprion_percula
ENSAMXG00000038693	SRL	100	73.951	ENSATEG00000024315	srl	93	73.982	Anabas_testudineus
ENSAMXG00000038693	SRL	100	78.462	ENSATEG00000009643	SRL	52	82.439	Anabas_testudineus
ENSAMXG00000038693	SRL	99	70.690	ENSACAG00000016380	SRL	82	71.619	Anolis_carolinensis
ENSAMXG00000038693	SRL	100	73.951	ENSACLG00000027685	srl	92	77.857	Astatotilapia_calliptera
ENSAMXG00000038693	SRL	100	75.604	ENSACLG00000024674	SRL	56	80.914	Astatotilapia_calliptera
ENSAMXG00000038693	SRL	99	73.230	ENSBTAG00000001078	SRL	52	77.590	Bos_taurus
ENSAMXG00000038693	SRL	100	73.289	ENSCJAG00000019750	SRL	92	73.624	Callithrix_jacchus
ENSAMXG00000038693	SRL	100	73.068	ENSCAFG00000019233	SRL	77	77.590	Canis_familiaris
ENSAMXG00000038693	SRL	100	73.068	ENSCAFG00020025024	SRL	51	77.590	Canis_lupus_dingo
ENSAMXG00000038693	SRL	99	73.230	ENSCHIG00000017927	SRL	52	77.590	Capra_hircus
ENSAMXG00000038693	SRL	100	73.731	ENSTSYG00000007919	SRL	94	77.916	Carlito_syrichta
ENSAMXG00000038693	SRL	100	73.731	ENSCPOG00000012643	SRL	88	78.313	Cavia_porcellus
ENSAMXG00000038693	SRL	100	69.316	ENSCCAG00000032646	SRL	93	80.398	Cebus_capucinus
ENSAMXG00000038693	SRL	100	73.510	ENSCATG00000032227	-	92	73.853	Cercocebus_atys
ENSAMXG00000038693	SRL	100	73.951	ENSCLAG00000016242	SRL	88	78.313	Chinchilla_lanigera
ENSAMXG00000038693	SRL	99	74.559	ENSCPBG00000026371	SRL	88	75.117	Chrysemys_picta_bellii
ENSAMXG00000038693	SRL	92	56.802	ENSCING00000005231	-	93	56.802	Ciona_intestinalis
ENSAMXG00000038693	SRL	100	73.510	ENSCANG00000035872	SRL	94	78.164	Colobus_angolensis_palliatus
ENSAMXG00000038693	SRL	100	73.731	ENSCGRG00001016630	Srl	88	78.072	Cricetulus_griseus_chok1gshd
ENSAMXG00000038693	SRL	100	73.731	ENSCGRG00000005458	Srl	88	78.072	Cricetulus_griseus_crigri
ENSAMXG00000038693	SRL	100	74.834	ENSCSEG00000011866	SRL	83	79.952	Cynoglossus_semilaevis
ENSAMXG00000038693	SRL	100	73.951	ENSCSEG00000016151	srl	90	77.857	Cynoglossus_semilaevis
ENSAMXG00000038693	SRL	100	77.263	ENSCVAG00000022465	SRL	60	79.952	Cyprinodon_variegatus
ENSAMXG00000038693	SRL	100	74.614	ENSCVAG00000003513	srl	91	78.571	Cyprinodon_variegatus
ENSAMXG00000038693	SRL	100	72.848	ENSDARG00000104587	srl	89	76.611	Danio_rerio
ENSAMXG00000038693	SRL	86	80.769	ENSDARG00000112959	CABZ01072309.1	100	80.000	Danio_rerio
ENSAMXG00000038693	SRL	100	72.848	ENSDNOG00000011643	SRL	50	77.108	Dasypus_novemcinctus
ENSAMXG00000038693	SRL	90	77.396	ENSDORG00000014807	Srl	88	77.349	Dipodomys_ordii
ENSAMXG00000038693	SRL	78	64.607	ENSEBUG00000015937	srl	90	64.607	Eptatretus_burgeri
ENSAMXG00000038693	SRL	99	72.566	ENSEASG00005000942	SRL	50	76.627	Equus_asinus_asinus
ENSAMXG00000038693	SRL	99	72.566	ENSECAG00000024219	SRL	92	72.706	Equus_caballus
ENSAMXG00000038693	SRL	100	72.103	ENSELUG00000015616	srl	89	75.694	Esox_lucius
ENSAMXG00000038693	SRL	100	73.068	ENSFCAG00000022075	SRL	92	73.624	Felis_catus
ENSAMXG00000038693	SRL	99	72.727	ENSFALG00000004328	SRL	59	77.053	Ficedula_albicollis
ENSAMXG00000038693	SRL	100	73.731	ENSFDAG00000006199	SRL	88	78.072	Fukomys_damarensis
ENSAMXG00000038693	SRL	100	74.172	ENSFHEG00000011239	srl	91	78.095	Fundulus_heteroclitus
ENSAMXG00000038693	SRL	100	76.754	ENSFHEG00000011854	SRL	93	80.435	Fundulus_heteroclitus
ENSAMXG00000038693	SRL	99	72.845	ENSGMOG00000014954	srl	95	76.389	Gadus_morhua
ENSAMXG00000038693	SRL	99	72.727	ENSGALG00000038884	SRL	88	77.295	Gallus_gallus
ENSAMXG00000038693	SRL	100	76.821	ENSGAFG00000016984	SRL	95	80.238	Gambusia_affinis
ENSAMXG00000038693	SRL	100	75.276	ENSGAFG00000000010	srl	91	79.286	Gambusia_affinis
ENSAMXG00000038693	SRL	99	71.983	ENSGACG00000011332	srl	95	75.463	Gasterosteus_aculeatus
ENSAMXG00000038693	SRL	100	73.510	ENSGGOG00000011312	-	88	77.831	Gorilla_gorilla
ENSAMXG00000038693	SRL	100	75.824	ENSHBUG00000015710	SRL	57	78.641	Haplochromis_burtoni
ENSAMXG00000038693	SRL	100	73.951	ENSHBUG00000007581	srl	92	77.857	Haplochromis_burtoni
ENSAMXG00000038693	SRL	100	73.731	ENSHGLG00000015271	SRL	88	78.072	Heterocephalus_glaber_female
ENSAMXG00000038693	SRL	100	73.731	ENSHGLG00100019378	SRL	88	78.072	Heterocephalus_glaber_male
ENSAMXG00000038693	SRL	100	73.068	ENSHCOG00000008687	srl	93	76.905	Hippocampus_comes
ENSAMXG00000038693	SRL	100	78.855	ENSHCOG00000001012	SRL	54	78.076	Hippocampus_comes
ENSAMXG00000038693	SRL	100	73.731	ENSIPUG00000012513	srl	90	77.566	Ictalurus_punctatus
ENSAMXG00000038693	SRL	100	77.293	ENSIPUG00000011609	SRL	92	79.524	Ictalurus_punctatus
ENSAMXG00000038693	SRL	100	73.510	ENSSTOG00000021151	-	88	78.072	Ictidomys_tridecemlineatus
ENSAMXG00000038693	SRL	100	73.510	ENSJJAG00000016400	Srl	88	78.313	Jaculus_jaculus
ENSAMXG00000038693	SRL	93	77.619	ENSKMAG00000014115	srl	88	79.449	Kryptolebias_marmoratus
ENSAMXG00000038693	SRL	100	77.582	ENSKMAG00000019537	SRL	100	77.434	Kryptolebias_marmoratus
ENSAMXG00000038693	SRL	99	76.327	ENSLBEG00000013811	SRL	89	80.630	Labrus_bergylta
ENSAMXG00000038693	SRL	100	73.510	ENSLBEG00000026643	srl	93	74.208	Labrus_bergylta
ENSAMXG00000038693	SRL	100	71.648	ENSLACG00000002825	SRL	93	76.134	Latimeria_chalumnae
ENSAMXG00000038693	SRL	100	73.510	ENSLOCG00000002644	srl	89	77.804	Lepisosteus_oculatus
ENSAMXG00000038693	SRL	97	73.696	ENSMFAG00000037383	SRL	94	78.164	Macaca_fascicularis
ENSAMXG00000038693	SRL	100	73.510	ENSMNEG00000019236	-	88	77.831	Macaca_nemestrina
ENSAMXG00000038693	SRL	100	67.991	ENSMLEG00000032156	SRL	82	78.788	Mandrillus_leucophaeus
ENSAMXG00000038693	SRL	100	74.393	ENSMAMG00000023322	srl	89	78.333	Mastacembelus_armatus
ENSAMXG00000038693	SRL	99	78.855	ENSMAMG00000013756	SRL	55	80.000	Mastacembelus_armatus
ENSAMXG00000038693	SRL	100	75.604	ENSMZEG00005004010	SRL	56	80.100	Maylandia_zebra
ENSAMXG00000038693	SRL	100	73.951	ENSMZEG00005004548	srl	92	77.857	Maylandia_zebra
ENSAMXG00000038693	SRL	99	72.949	ENSMGAG00000009342	SRL	92	80.495	Meleagris_gallopavo
ENSAMXG00000038693	SRL	100	73.068	ENSMICG00000032307	SRL	88	77.349	Microcebus_murinus
ENSAMXG00000038693	SRL	100	73.068	ENSMOCG00000008208	Srl	88	77.831	Microtus_ochrogaster
ENSAMXG00000038693	SRL	99	74.893	ENSMMOG00000021572	SRL	94	78.372	Mola_mola
ENSAMXG00000038693	SRL	100	73.731	ENSMMOG00000013970	srl	93	77.619	Mola_mola
ENSAMXG00000038693	SRL	99	73.009	ENSMODG00000016380	-	53	68.530	Monodelphis_domestica
ENSAMXG00000038693	SRL	100	73.068	ENSMALG00000005039	srl	93	76.905	Monopterus_albus
ENSAMXG00000038693	SRL	94	78.923	ENSMALG00000000670	SRL	94	83.590	Monopterus_albus
ENSAMXG00000038693	SRL	100	73.068	MGP_CAROLIEiJ_G0020400	Srl	88	77.590	Mus_caroli
ENSAMXG00000038693	SRL	100	72.848	ENSMUSG00000022519	Srl	88	77.590	Mus_musculus
ENSAMXG00000038693	SRL	100	72.848	MGP_SPRETEiJ_G0021294	Srl	88	77.590	Mus_spretus
ENSAMXG00000038693	SRL	90	77.887	ENSMPUG00000015025	SRL	50	77.831	Mustela_putorius_furo
ENSAMXG00000038693	SRL	89	77.475	ENSMLUG00000030733	SRL	52	76.867	Myotis_lucifugus
ENSAMXG00000038693	SRL	100	72.848	ENSNGAG00000019741	Srl	88	77.590	Nannospalax_galili
ENSAMXG00000038693	SRL	100	73.951	ENSNBRG00000023775	srl	93	74.487	Neolamprologus_brichardi
ENSAMXG00000038693	SRL	100	75.824	ENSNBRG00000002422	SRL	59	78.780	Neolamprologus_brichardi
ENSAMXG00000038693	SRL	100	69.316	ENSNLEG00000029051	SRL	82	80.441	Nomascus_leucogenys
ENSAMXG00000038693	SRL	100	73.951	ENSODEG00000013256	SRL	88	78.313	Octodon_degus
ENSAMXG00000038693	SRL	100	74.393	ENSONIG00000005192	srl	92	75.463	Oreochromis_niloticus
ENSAMXG00000038693	SRL	100	76.380	ENSORLG00000015064	SRL	93	79.524	Oryzias_latipes
ENSAMXG00000038693	SRL	100	74.172	ENSORLG00000008291	srl	87	81.148	Oryzias_latipes
ENSAMXG00000038693	SRL	100	76.159	ENSORLG00020018173	SRL	93	79.286	Oryzias_latipes_hni
ENSAMXG00000038693	SRL	100	74.172	ENSORLG00020019784	srl	75	81.148	Oryzias_latipes_hni
ENSAMXG00000038693	SRL	100	76.380	ENSORLG00015019063	SRL	97	76.159	Oryzias_latipes_hsok
ENSAMXG00000038693	SRL	100	74.393	ENSORLG00015009342	srl	86	78.333	Oryzias_latipes_hsok
ENSAMXG00000038693	SRL	100	74.614	ENSOMEG00000010006	srl	93	78.708	Oryzias_melastigma
ENSAMXG00000038693	SRL	100	76.484	ENSOMEG00000005682	SRL	50	83.120	Oryzias_melastigma
ENSAMXG00000038693	SRL	100	72.627	ENSOGAG00000029266	SRL	51	77.108	Otolemur_garnettii
ENSAMXG00000038693	SRL	99	73.009	ENSOARG00000003074	SRL	52	77.590	Ovis_aries
ENSAMXG00000038693	SRL	100	73.510	ENSPPAG00000024919	-	94	78.164	Pan_paniscus
ENSAMXG00000038693	SRL	100	73.068	ENSPPRG00000010274	SRL	94	77.667	Panthera_pardus
ENSAMXG00000038693	SRL	100	73.068	ENSPTIG00000015162	SRL	94	77.667	Panthera_tigris_altaica
ENSAMXG00000038693	SRL	100	73.510	ENSPTRG00000007712	SRL	94	78.164	Pan_troglodytes
ENSAMXG00000038693	SRL	100	73.510	ENSPANG00000013804	SRL	94	73.182	Papio_anubis
ENSAMXG00000038693	SRL	100	74.614	ENSPKIG00000006405	srl	93	74.545	Paramormyrops_kingsleyae
ENSAMXG00000038693	SRL	100	72.967	ENSPKIG00000024974	SRL	84	76.611	Paramormyrops_kingsleyae
ENSAMXG00000038693	SRL	100	76.159	ENSPMGG00000023505	-	96	80.288	Periophthalmus_magnuspinnatus
ENSAMXG00000038693	SRL	100	73.510	ENSPMGG00000021081	srl	91	77.381	Periophthalmus_magnuspinnatus
ENSAMXG00000038693	SRL	100	73.289	ENSPEMG00000015842	Srl	88	78.072	Peromyscus_maniculatus_bairdii
ENSAMXG00000038693	SRL	95	62.812	ENSPMAG00000004786	srl	93	65.848	Petromyzon_marinus
ENSAMXG00000038693	SRL	99	72.788	ENSPCIG00000012128	SRL	91	76.867	Phascolarctos_cinereus
ENSAMXG00000038693	SRL	100	73.333	ENSPFOG00000011408	srl	89	77.083	Poecilia_formosa
ENSAMXG00000038693	SRL	100	76.159	ENSPLAG00000002932	SRL	93	79.616	Poecilia_latipinna
ENSAMXG00000038693	SRL	100	75.276	ENSPLAG00000008017	srl	91	79.286	Poecilia_latipinna
ENSAMXG00000038693	SRL	100	75.276	ENSPMEG00000006745	srl	91	79.286	Poecilia_mexicana
ENSAMXG00000038693	SRL	100	75.824	ENSPMEG00000005890	SRL	58	80.198	Poecilia_mexicana
ENSAMXG00000038693	SRL	100	75.055	ENSPREG00000007751	srl	93	79.048	Poecilia_reticulata
ENSAMXG00000038693	SRL	100	77.042	ENSPREG00000000315	SRL	93	80.336	Poecilia_reticulata
ENSAMXG00000038693	SRL	95	74.825	ENSPPYG00000007053	SRL	91	79.540	Pongo_abelii
ENSAMXG00000038693	SRL	100	73.289	ENSPCOG00000023135	SRL	94	77.667	Propithecus_coquereli
ENSAMXG00000038693	SRL	89	77.970	ENSPVAG00000006586	SRL	51	77.349	Pteropus_vampyrus
ENSAMXG00000038693	SRL	100	75.604	ENSPNYG00000003423	SRL	55	80.100	Pundamilia_nyererei
ENSAMXG00000038693	SRL	100	73.951	ENSPNYG00000001200	srl	92	77.857	Pundamilia_nyererei
ENSAMXG00000038693	SRL	99	88.053	ENSPNAG00000007361	-	91	87.611	Pygocentrus_nattereri
ENSAMXG00000038693	SRL	100	73.289	ENSPNAG00000023106	srl	89	77.088	Pygocentrus_nattereri
ENSAMXG00000038693	SRL	100	73.289	ENSSBOG00000029273	SRL	92	73.624	Saimiri_boliviensis_boliviensis
ENSAMXG00000038693	SRL	99	73.230	ENSSHAG00000011715	-	53	68.008	Sarcophilus_harrisii
ENSAMXG00000038693	SRL	100	73.510	ENSSFOG00015009773	srl	90	77.327	Scleropages_formosus
ENSAMXG00000038693	SRL	100	73.289	ENSSFOG00015021327	SRL	51	78.934	Scleropages_formosus
ENSAMXG00000038693	SRL	100	73.951	ENSSMAG00000016274	srl	92	77.857	Scophthalmus_maximus
ENSAMXG00000038693	SRL	100	73.510	ENSSDUG00000010808	srl	93	77.381	Seriola_dumerili
ENSAMXG00000038693	SRL	100	76.957	ENSSDUG00000009161	SRL	94	80.806	Seriola_dumerili
ENSAMXG00000038693	SRL	100	73.510	ENSSLDG00000022024	srl	91	77.381	Seriola_lalandi_dorsalis
ENSAMXG00000038693	SRL	100	78.901	ENSSLDG00000014601	SRL	91	82.892	Seriola_lalandi_dorsalis
ENSAMXG00000038693	SRL	99	73.009	ENSSPUG00000016859	SRL	91	77.590	Sphenodon_punctatus
ENSAMXG00000038693	SRL	100	74.614	ENSSPAG00000019105	srl	93	75.171	Stegastes_partitus
ENSAMXG00000038693	SRL	99	77.876	ENSSPAG00000014254	SRL	94	81.490	Stegastes_partitus
ENSAMXG00000038693	SRL	99	73.894	ENSSSCG00000007949	SRL	92	77.831	Sus_scrofa
ENSAMXG00000038693	SRL	99	72.506	ENSTGUG00000003951	-	91	76.812	Taeniopygia_guttata
ENSAMXG00000038693	SRL	80	78.670	ENSTGUG00000016121	-	99	78.670	Taeniopygia_guttata
ENSAMXG00000038693	SRL	100	74.614	ENSTRUG00000006005	srl	93	74.887	Takifugu_rubripes
ENSAMXG00000038693	SRL	95	77.156	ENSTRUG00000013310	SRL	58	81.330	Takifugu_rubripes
ENSAMXG00000038693	SRL	100	74.393	ENSTNIG00000009739	srl	89	78.333	Tetraodon_nigroviridis
ENSAMXG00000038693	SRL	100	73.068	ENSUAMG00000005701	SRL	51	77.590	Ursus_americanus
ENSAMXG00000038693	SRL	100	73.068	ENSUMAG00000002574	SRL	51	77.590	Ursus_maritimus
ENSAMXG00000038693	SRL	100	72.406	ENSXETG00000017313	srl	92	76.867	Xenopus_tropicalis
ENSAMXG00000038693	SRL	100	76.380	ENSXCOG00000014584	SRL	94	79.762	Xiphophorus_couchianus
ENSAMXG00000038693	SRL	96	76.212	ENSXCOG00000010424	srl	92	80.500	Xiphophorus_couchianus
ENSAMXG00000038693	SRL	100	76.923	ENSXMAG00000027598	SRL	61	80.392	Xiphophorus_maculatus
ENSAMXG00000038693	SRL	100	74.834	ENSXMAG00000004625	srl	85	78.810	Xiphophorus_maculatus