EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038716 (Gene tree)
Gene ID: 103041457
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9354 bases
Position: chr19:35300774-35310127
Accession: 103041457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000031322	MMR_HSR1	PF01926.23	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039611	-	5718	XM_007227758	ENSAMXP00000031322	233 (aa)	XP_007227820	W5K3R6

Gene Model

Click here to download ENSAMXG00000038716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038716	rabl3	100	85.593	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSAMXG00000038716	rabl3	100	93.590	ENSAPOG00000024479	rabl3	100	93.590	Acanthochromis_polyacanthus
ENSAMXG00000038716	rabl3	100	86.441	ENSAMEG00000004809	RABL3	100	86.441	Ailuropoda_melanoleuca
ENSAMXG00000038716	rabl3	100	88.841	ENSACIG00000014343	rabl3	100	88.841	Amphilophus_citrinellus
ENSAMXG00000038716	rabl3	100	93.590	ENSAOCG00000011851	rabl3	100	93.590	Amphiprion_ocellaris
ENSAMXG00000038716	rabl3	100	93.590	ENSAPEG00000011214	rabl3	100	93.590	Amphiprion_percula
ENSAMXG00000038716	rabl3	100	93.991	ENSATEG00000003503	rabl3	100	93.991	Anabas_testudineus
ENSAMXG00000038716	rabl3	100	81.780	ENSACAG00000011313	-	100	81.780	Anolis_carolinensis
ENSAMXG00000038716	rabl3	100	87.712	ENSANAG00000027278	RABL3	100	87.712	Aotus_nancymaae
ENSAMXG00000038716	rabl3	100	93.991	ENSACLG00000009820	rabl3	100	93.991	Astatotilapia_calliptera
ENSAMXG00000038716	rabl3	100	88.136	ENSBTAG00000015898	RABL3	100	88.136	Bos_taurus
ENSAMXG00000038716	rabl3	100	87.712	ENSCJAG00000008611	RABL3	100	87.712	Callithrix_jacchus
ENSAMXG00000038716	rabl3	100	87.288	ENSCAFG00000011292	RABL3	89	87.288	Canis_familiaris
ENSAMXG00000038716	rabl3	100	87.288	ENSCAFG00020006397	RABL3	100	87.288	Canis_lupus_dingo
ENSAMXG00000038716	rabl3	100	88.136	ENSCHIG00000017365	RABL3	100	88.136	Capra_hircus
ENSAMXG00000038716	rabl3	100	86.017	ENSCPOG00000009645	RABL3	100	86.017	Cavia_porcellus
ENSAMXG00000038716	rabl3	100	86.017	ENSCATG00000032561	RABL3	100	86.017	Cercocebus_atys
ENSAMXG00000038716	rabl3	100	85.593	ENSCLAG00000010855	RABL3	100	85.593	Chinchilla_lanigera
ENSAMXG00000038716	rabl3	99	85.837	ENSCSAG00000007155	RABL3	100	85.837	Chlorocebus_sabaeus
ENSAMXG00000038716	rabl3	100	86.441	ENSCPBG00000001999	RABL3	100	86.441	Chrysemys_picta_bellii
ENSAMXG00000038716	rabl3	100	86.017	ENSCANG00000031684	RABL3	100	86.017	Colobus_angolensis_palliatus
ENSAMXG00000038716	rabl3	100	83.898	ENSCGRG00001021537	Rabl3	100	83.898	Cricetulus_griseus_chok1gshd
ENSAMXG00000038716	rabl3	100	83.898	ENSCGRG00000002114	Rabl3	100	83.898	Cricetulus_griseus_crigri
ENSAMXG00000038716	rabl3	100	82.403	ENSCSEG00000014982	rabl3	100	82.403	Cynoglossus_semilaevis
ENSAMXG00000038716	rabl3	100	78.970	ENSCVAG00000009904	rabl3	100	78.970	Cyprinodon_variegatus
ENSAMXG00000038716	rabl3	100	91.845	ENSDARG00000040959	rabl3	100	91.845	Danio_rerio
ENSAMXG00000038716	rabl3	100	85.169	ENSDNOG00000008174	RABL3	100	85.169	Dasypus_novemcinctus
ENSAMXG00000038716	rabl3	100	85.593	ENSETEG00000010206	RABL3	100	85.593	Echinops_telfairi
ENSAMXG00000038716	rabl3	100	87.712	ENSECAG00000023059	RABL3	100	87.712	Equus_caballus
ENSAMXG00000038716	rabl3	100	81.780	ENSEEUG00000002897	RABL3	100	81.780	Erinaceus_europaeus
ENSAMXG00000038716	rabl3	100	91.845	ENSELUG00000014758	rabl3	100	91.845	Esox_lucius
ENSAMXG00000038716	rabl3	100	87.288	ENSFCAG00000031879	RABL3	100	77.966	Felis_catus
ENSAMXG00000038716	rabl3	100	84.322	ENSFALG00000005296	RABL3	100	84.322	Ficedula_albicollis
ENSAMXG00000038716	rabl3	100	87.234	ENSFDAG00000000307	RABL3	100	87.234	Fukomys_damarensis
ENSAMXG00000038716	rabl3	100	93.133	ENSFHEG00000011273	rabl3	100	93.133	Fundulus_heteroclitus
ENSAMXG00000038716	rabl3	100	92.275	ENSGMOG00000007845	rabl3	100	92.275	Gadus_morhua
ENSAMXG00000038716	rabl3	100	85.593	ENSGALG00000014949	RABL3	100	85.593	Gallus_gallus
ENSAMXG00000038716	rabl3	100	92.275	ENSGAFG00000015953	rabl3	100	92.275	Gambusia_affinis
ENSAMXG00000038716	rabl3	100	90.129	ENSGACG00000007387	rabl3	100	93.798	Gasterosteus_aculeatus
ENSAMXG00000038716	rabl3	100	86.864	ENSGAGG00000003677	RABL3	100	86.864	Gopherus_agassizii
ENSAMXG00000038716	rabl3	100	85.593	ENSGGOG00000006059	RABL3	100	85.593	Gorilla_gorilla
ENSAMXG00000038716	rabl3	100	94.421	ENSHBUG00000019478	rabl3	93	94.421	Haplochromis_burtoni
ENSAMXG00000038716	rabl3	100	86.809	ENSHGLG00000014491	RABL3	100	86.809	Heterocephalus_glaber_female
ENSAMXG00000038716	rabl3	100	86.809	ENSHGLG00100004866	RABL3	100	86.809	Heterocephalus_glaber_male
ENSAMXG00000038716	rabl3	100	80.258	ENSHCOG00000019245	rabl3	100	80.258	Hippocampus_comes
ENSAMXG00000038716	rabl3	100	94.421	ENSIPUG00000012657	rabl3	100	94.421	Ictalurus_punctatus
ENSAMXG00000038716	rabl3	100	85.593	ENSSTOG00000019452	RABL3	100	85.593	Ictidomys_tridecemlineatus
ENSAMXG00000038716	rabl3	100	76.695	ENSJJAG00000023553	Rabl3	100	76.695	Jaculus_jaculus
ENSAMXG00000038716	rabl3	100	87.554	ENSKMAG00000015464	rabl3	100	87.554	Kryptolebias_marmoratus
ENSAMXG00000038716	rabl3	100	93.162	ENSLBEG00000010627	-	100	93.162	Labrus_bergylta
ENSAMXG00000038716	rabl3	100	93.162	ENSLBEG00000020595	rabl3	100	93.162	Labrus_bergylta
ENSAMXG00000038716	rabl3	100	87.288	ENSLOCG00000006265	rabl3	100	87.288	Lepisosteus_oculatus
ENSAMXG00000038716	rabl3	100	86.864	ENSLAFG00000003711	RABL3	100	86.864	Loxodonta_africana
ENSAMXG00000038716	rabl3	100	86.017	ENSMFAG00000031923	RABL3	100	86.017	Macaca_fascicularis
ENSAMXG00000038716	rabl3	100	76.695	ENSMMUG00000001594	RABL3	100	76.695	Macaca_mulatta
ENSAMXG00000038716	rabl3	100	86.017	ENSMNEG00000043980	RABL3	100	86.017	Macaca_nemestrina
ENSAMXG00000038716	rabl3	100	86.017	ENSMLEG00000028177	RABL3	100	86.017	Mandrillus_leucophaeus
ENSAMXG00000038716	rabl3	100	93.991	ENSMAMG00000015155	rabl3	100	93.991	Mastacembelus_armatus
ENSAMXG00000038716	rabl3	100	93.991	ENSMZEG00005002607	rabl3	100	93.991	Maylandia_zebra
ENSAMXG00000038716	rabl3	100	83.898	ENSMAUG00000013022	Rabl3	100	83.898	Mesocricetus_auratus
ENSAMXG00000038716	rabl3	100	86.864	ENSMICG00000049288	RABL3	100	86.864	Microcebus_murinus
ENSAMXG00000038716	rabl3	100	83.475	ENSMOCG00000015237	Rabl3	100	83.475	Microtus_ochrogaster
ENSAMXG00000038716	rabl3	100	89.362	ENSMMOG00000005628	rabl3	100	89.362	Mola_mola
ENSAMXG00000038716	rabl3	100	86.017	ENSMODG00000018232	RABL3	100	86.017	Monodelphis_domestica
ENSAMXG00000038716	rabl3	100	86.441	ENSMALG00000018837	rabl3	100	86.441	Monopterus_albus
ENSAMXG00000038716	rabl3	100	83.898	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSAMXG00000038716	rabl3	100	83.898	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSAMXG00000038716	rabl3	100	83.475	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSAMXG00000038716	rabl3	100	83.898	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSAMXG00000038716	rabl3	100	87.288	ENSMPUG00000008257	RABL3	89	87.288	Mustela_putorius_furo
ENSAMXG00000038716	rabl3	100	86.864	ENSMLUG00000014113	RABL3	100	86.864	Myotis_lucifugus
ENSAMXG00000038716	rabl3	99	76.957	ENSNGAG00000001939	Rabl3	99	76.957	Nannospalax_galili
ENSAMXG00000038716	rabl3	93	94.009	ENSNBRG00000012423	rabl3	92	94.009	Neolamprologus_brichardi
ENSAMXG00000038716	rabl3	100	85.593	ENSNLEG00000031723	RABL3	100	85.593	Nomascus_leucogenys
ENSAMXG00000038716	rabl3	100	84.746	ENSMEUG00000006606	RABL3	100	84.746	Notamacropus_eugenii
ENSAMXG00000038716	rabl3	100	85.593	ENSODEG00000004758	-	100	85.593	Octodon_degus
ENSAMXG00000038716	rabl3	100	94.850	ENSONIG00000004281	rabl3	100	94.850	Oreochromis_niloticus
ENSAMXG00000038716	rabl3	99	84.615	ENSOANG00000003928	RABL3	99	84.615	Ornithorhynchus_anatinus
ENSAMXG00000038716	rabl3	100	91.845	ENSORLG00000020457	rabl3	100	91.845	Oryzias_latipes
ENSAMXG00000038716	rabl3	100	91.845	ENSORLG00020008991	rabl3	100	87.124	Oryzias_latipes_hni
ENSAMXG00000038716	rabl3	100	91.845	ENSORLG00015005649	rabl3	88	91.845	Oryzias_latipes_hsok
ENSAMXG00000038716	rabl3	100	93.133	ENSOMEG00000015066	rabl3	100	93.133	Oryzias_melastigma
ENSAMXG00000038716	rabl3	100	86.441	ENSOGAG00000005961	RABL3	100	86.441	Otolemur_garnettii
ENSAMXG00000038716	rabl3	100	88.136	ENSOARG00000019939	RABL3	100	88.136	Ovis_aries
ENSAMXG00000038716	rabl3	94	84.234	ENSPPAG00000036997	RABL3	87	84.234	Pan_paniscus
ENSAMXG00000038716	rabl3	100	87.288	ENSPPRG00000016325	RABL3	100	87.288	Panthera_pardus
ENSAMXG00000038716	rabl3	100	87.288	ENSPTIG00000018021	RABL3	100	87.288	Panthera_tigris_altaica
ENSAMXG00000038716	rabl3	100	85.593	ENSPTRG00000015272	RABL3	100	85.593	Pan_troglodytes
ENSAMXG00000038716	rabl3	100	86.017	ENSPANG00000001339	RABL3	100	86.017	Papio_anubis
ENSAMXG00000038716	rabl3	100	92.275	ENSPKIG00000007818	rabl3	100	92.275	Paramormyrops_kingsleyae
ENSAMXG00000038716	rabl3	100	86.017	ENSPSIG00000011358	RABL3	100	86.017	Pelodiscus_sinensis
ENSAMXG00000038716	rabl3	100	87.554	ENSPMGG00000015794	rabl3	100	87.554	Periophthalmus_magnuspinnatus
ENSAMXG00000038716	rabl3	100	83.898	ENSPEMG00000016913	Rabl3	100	83.898	Peromyscus_maniculatus_bairdii
ENSAMXG00000038716	rabl3	100	84.746	ENSPCIG00000018922	RABL3	100	84.746	Phascolarctos_cinereus
ENSAMXG00000038716	rabl3	100	93.133	ENSPFOG00000008586	rabl3	100	93.133	Poecilia_formosa
ENSAMXG00000038716	rabl3	100	93.133	ENSPLAG00000014482	rabl3	100	93.133	Poecilia_latipinna
ENSAMXG00000038716	rabl3	100	93.133	ENSPMEG00000002295	rabl3	100	93.133	Poecilia_mexicana
ENSAMXG00000038716	rabl3	100	92.704	ENSPREG00000014815	rabl3	100	92.704	Poecilia_reticulata
ENSAMXG00000038716	rabl3	100	86.017	ENSPPYG00000013501	RABL3	100	86.017	Pongo_abelii
ENSAMXG00000038716	rabl3	100	87.288	ENSPCOG00000022230	RABL3	100	87.288	Propithecus_coquereli
ENSAMXG00000038716	rabl3	100	86.017	ENSPVAG00000010013	RABL3	100	86.017	Pteropus_vampyrus
ENSAMXG00000038716	rabl3	100	94.421	ENSPNYG00000006659	rabl3	100	94.421	Pundamilia_nyererei
ENSAMXG00000038716	rabl3	100	97.425	ENSPNAG00000000748	rabl3	100	97.425	Pygocentrus_nattereri
ENSAMXG00000038716	rabl3	100	83.475	ENSRNOG00000026085	Rabl3	100	83.475	Rattus_norvegicus
ENSAMXG00000038716	rabl3	100	86.017	ENSRBIG00000040941	RABL3	100	86.017	Rhinopithecus_bieti
ENSAMXG00000038716	rabl3	100	86.017	ENSRROG00000043745	RABL3	100	86.017	Rhinopithecus_roxellana
ENSAMXG00000038716	rabl3	100	87.712	ENSSBOG00000004022	RABL3	100	87.712	Saimiri_boliviensis_boliviensis
ENSAMXG00000038716	rabl3	100	84.322	ENSSHAG00000012233	RABL3	100	84.322	Sarcophilus_harrisii
ENSAMXG00000038716	rabl3	100	92.704	ENSSFOG00015010171	rabl3	100	92.704	Scleropages_formosus
ENSAMXG00000038716	rabl3	100	92.735	ENSSMAG00000002403	rabl3	100	92.735	Scophthalmus_maximus
ENSAMXG00000038716	rabl3	100	94.421	ENSSDUG00000012078	rabl3	100	94.421	Seriola_dumerili
ENSAMXG00000038716	rabl3	100	94.850	ENSSLDG00000021899	rabl3	100	94.850	Seriola_lalandi_dorsalis
ENSAMXG00000038716	rabl3	100	86.864	ENSSARG00000008316	RABL3	100	86.864	Sorex_araneus
ENSAMXG00000038716	rabl3	100	86.017	ENSSPUG00000017490	RABL3	100	86.017	Sphenodon_punctatus
ENSAMXG00000038716	rabl3	100	93.991	ENSSPAG00000011642	rabl3	100	93.991	Stegastes_partitus
ENSAMXG00000038716	rabl3	100	87.712	ENSSSCG00000035258	RABL3	100	87.712	Sus_scrofa
ENSAMXG00000038716	rabl3	100	84.746	ENSTGUG00000013374	RABL3	100	84.746	Taeniopygia_guttata
ENSAMXG00000038716	rabl3	78	92.818	ENSTRUG00000007846	RABL3	100	96.094	Takifugu_rubripes
ENSAMXG00000038716	rabl3	100	74.153	ENSTBEG00000005153	RABL3	100	74.153	Tupaia_belangeri
ENSAMXG00000038716	rabl3	100	86.441	ENSUAMG00000005299	RABL3	100	86.441	Ursus_americanus
ENSAMXG00000038716	rabl3	100	86.017	ENSUMAG00000025256	RABL3	89	86.017	Ursus_maritimus
ENSAMXG00000038716	rabl3	100	87.712	ENSVPAG00000003776	RABL3	100	87.712	Vicugna_pacos
ENSAMXG00000038716	rabl3	100	87.288	ENSVVUG00000022300	RABL3	89	87.288	Vulpes_vulpes
ENSAMXG00000038716	rabl3	100	92.704	ENSXMAG00000003244	rabl3	100	92.704	Xiphophorus_maculatus