EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038719 (Gene tree)
Gene ID: 103047869
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 70907 bases
Position: chrAPWO02000039.1:88725-159631
Accession: 103047869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033222	SRRM_C	PF15230.6	7.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030724	-	2249	XM_022664678	ENSAMXP00000033222	580 (aa)	XP_022520399	UPI000BBDB6E9

Gene Model

Click here to download ENSAMXG00000038719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038719	srrm4	92	53.125	ENSDARG00000086327	srrm4	87	53.802	Danio_rerio
ENSAMXG00000038719	srrm4	73	42.605	ENSGMOG00000006714	srrm4	69	61.176	Gadus_morhua
ENSAMXG00000038719	srrm4	75	57.143	ENSIPUG00000018138	srrm4	58	58.609	Ictalurus_punctatus
ENSAMXG00000038719	srrm4	87	42.000	ENSLBEG00000008471	srrm4	83	41.899	Labrus_bergylta
ENSAMXG00000038719	srrm4	54	48.657	ENSPFOG00000014600	srrm4	74	48.944	Poecilia_formosa
ENSAMXG00000038719	srrm4	88	44.712	ENSXMAG00000002658	srrm4	84	42.989	Xiphophorus_maculatus