EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038779 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 756 bases
Position: chrAPWO02002315.1:65192-65947
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052566	Transposase_22	PF02994.14	5.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053281	-	756	-	ENSAMXP00000052566	251 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038779	-	63	33.742	ENSAMXG00000036242	-	68	33.742
ENSAMXG00000038779	-	63	33.742	ENSAMXG00000038431	-	69	33.742
ENSAMXG00000038779	-	83	45.024	ENSAMXG00000038945	-	67	45.024
ENSAMXG00000038779	-	55	33.099	ENSAMXG00000038380	-	51	33.099
ENSAMXG00000038779	-	69	89.143	ENSAMXG00000041578	-	69	89.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038779	-	83	36.190	ENSKMAG00000001064	-	91	36.190	Kryptolebias_marmoratus
ENSAMXG00000038779	-	73	38.919	ENSKMAG00000003890	-	91	38.919	Kryptolebias_marmoratus
ENSAMXG00000038779	-	61	41.667	ENSKMAG00000010459	-	73	41.667	Kryptolebias_marmoratus
ENSAMXG00000038779	-	67	40.237	ENSKMAG00000015348	-	85	40.237	Kryptolebias_marmoratus
ENSAMXG00000038779	-	83	35.238	ENSPLAG00000016788	-	63	35.238	Poecilia_latipinna
ENSAMXG00000038779	-	65	43.293	ENSPNAG00000001558	-	78	43.293	Pygocentrus_nattereri
ENSAMXG00000038779	-	84	91.905	ENSPNAG00000018026	-	89	91.905	Pygocentrus_nattereri
ENSAMXG00000038779	-	83	85.577	ENSPNAG00000011528	-	92	85.577	Pygocentrus_nattereri
ENSAMXG00000038779	-	89	44.934	ENSPNAG00000014260	-	83	44.934	Pygocentrus_nattereri
ENSAMXG00000038779	-	66	41.818	ENSSDUG00000017942	-	74	41.818	Seriola_dumerili