EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000038868 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
2311 bases
Position
chrAPWO02001230.1:25832-28142
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000034843DNA_RNApol_7kDPF03604.131.1e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000039750-168-ENSAMXP0000003484355 (aa)--
Gene Model
Click here to download ENSAMXG00000038868's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038868's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000038868-10075.000ENSAMXG00000031810-10075.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000038868-10070.000ENSG00000147669POLR2K10070.000Homo_sapiens
ENSAMXG00000038868-10070.000ENSAMEG00000000452POLR2K10070.000Ailuropoda_melanoleuca
ENSAMXG00000038868-10071.667ENSAPEG00000010759polr2k10071.667Amphiprion_percula
ENSAMXG00000038868-10071.667ENSATEG00000013218polr2k10071.667Anabas_testudineus
ENSAMXG00000038868-10066.667ENSACAG00000020961POLR2K10066.667Anolis_carolinensis
ENSAMXG00000038868-9864.407ENSANAG00000030159-10064.407Aotus_nancymaae
ENSAMXG00000038868-10070.000ENSANAG00000031482-10070.000Aotus_nancymaae
ENSAMXG00000038868-9345.588ENSBTAG00000052277-9945.588Bos_taurus
ENSAMXG00000038868-10070.000ENSBTAG00000022539POLR2K10070.000Bos_taurus
ENSAMXG00000038868-10070.000ENSCJAG00000041308-8270.000Callithrix_jacchus
ENSAMXG00000038868-10070.000ENSCJAG00000022168-10070.000Callithrix_jacchus
ENSAMXG00000038868-10066.667ENSCAFG00000032117POLR2K10066.667Canis_familiaris
ENSAMXG00000038868-10065.625ENSCAFG00020011172-10065.625Canis_lupus_dingo
ENSAMXG00000038868-10066.667ENSCAFG00020023694-10066.667Canis_lupus_dingo
ENSAMXG00000038868-10070.000ENSCAFG00020000296-10070.000Canis_lupus_dingo
ENSAMXG00000038868-10070.000ENSCHIG00000012813POLR2K10070.000Capra_hircus
ENSAMXG00000038868-10068.333ENSCHIG00000007790-10068.333Capra_hircus
ENSAMXG00000038868-10066.667ENSTSYG00000035576-10066.667Carlito_syrichta
ENSAMXG00000038868-9867.797ENSTSYG00000032761-10067.797Carlito_syrichta
ENSAMXG00000038868-7668.085ENSCAPG00000017627POLR2K9868.085Cavia_aperea
ENSAMXG00000038868-10068.333ENSCPOG00000036717POLR2K10068.333Cavia_porcellus
ENSAMXG00000038868-10070.000ENSCCAG00000004867-10070.000Cebus_capucinus
ENSAMXG00000038868-9866.102ENSCCAG00000002072-10066.102Cebus_capucinus
ENSAMXG00000038868-10070.000ENSCCAG00000019633-10070.000Cebus_capucinus
ENSAMXG00000038868-10070.000ENSCATG00000007143POLR2K10070.000Cercocebus_atys
ENSAMXG00000038868-10068.333ENSCLAG00000010033POLR2K10068.333Chinchilla_lanigera
ENSAMXG00000038868-10070.000ENSCSAG00000012163POLR2K10070.000Chlorocebus_sabaeus
ENSAMXG00000038868-8266.000ENSCHOG00000008820-9866.000Choloepus_hoffmanni
ENSAMXG00000038868-10063.333ENSCHOG00000000784-10063.333Choloepus_hoffmanni
ENSAMXG00000038868-10070.000ENSCHOG00000003599POLR2K10070.000Choloepus_hoffmanni
ENSAMXG00000038868-10070.000ENSCANG00000041713POLR2K10070.000Colobus_angolensis_palliatus
ENSAMXG00000038868-10070.000ENSCGRG00000011617Polr2k10070.000Cricetulus_griseus_crigri
ENSAMXG00000038868-10070.000ENSCSEG00000017377polr2k10070.000Cynoglossus_semilaevis
ENSAMXG00000038868-10071.667ENSCVAG00000022985-10071.667Cyprinodon_variegatus
ENSAMXG00000038868-10071.667ENSCVAG00000005198polr2k10071.667Cyprinodon_variegatus
ENSAMXG00000038868-10071.667ENSDARG00000075616polr2k10071.667Danio_rerio
ENSAMXG00000038868-10070.000ENSDNOG00000049353-10070.000Dasypus_novemcinctus
ENSAMXG00000038868-10068.333ENSDNOG00000030774-10068.333Dasypus_novemcinctus
ENSAMXG00000038868-10068.333ENSDNOG00000047079-10068.333Dasypus_novemcinctus
ENSAMXG00000038868-10061.667ENSDNOG00000038181-6661.667Dasypus_novemcinctus
ENSAMXG00000038868-10070.000ENSDORG00000028386Polr2k10070.000Dipodomys_ordii
ENSAMXG00000038868-8059.184FBgn0262954Rpb128259.184Drosophila_melanogaster
ENSAMXG00000038868-8256.000ENSEASG00005016441-5156.000Equus_asinus_asinus
ENSAMXG00000038868-10070.000ENSEASG00005002840-10070.000Equus_asinus_asinus
ENSAMXG00000038868-10070.000ENSECAG00000021345POLR2K10070.000Equus_caballus
ENSAMXG00000038868-9855.932ENSECAG00000029464-7255.932Equus_caballus
ENSAMXG00000038868-8264.000ENSEEUG00000015727POLR2K9864.000Erinaceus_europaeus
ENSAMXG00000038868-10071.667ENSFALG00000005795POLR2K10071.667Ficedula_albicollis
ENSAMXG00000038868-10070.000ENSFDAG00000000348POLR2K10070.000Fukomys_damarensis
ENSAMXG00000038868-8262.000ENSFDAG00000018794-9862.000Fukomys_damarensis
ENSAMXG00000038868-9852.632ENSFHEG00000019707-9352.632Fundulus_heteroclitus
ENSAMXG00000038868-10071.667ENSGAFG00000010349polr2k10071.667Gambusia_affinis
ENSAMXG00000038868-10071.667ENSGAGG00000009919POLR2K10071.667Gopherus_agassizii
ENSAMXG00000038868-10070.000ENSGGOG00000024539POLR2K10070.000Gorilla_gorilla
ENSAMXG00000038868-9158.182ENSGGOG00000015089-9658.182Gorilla_gorilla
ENSAMXG00000038868-10071.667ENSHBUG00000002269polr2k10071.667Haplochromis_burtoni
ENSAMXG00000038868-10065.000ENSHGLG00000021192-10065.000Heterocephalus_glaber_female
ENSAMXG00000038868-10070.000ENSHGLG00000004285POLR2K10070.000Heterocephalus_glaber_female
ENSAMXG00000038868-10070.000ENSHGLG00100005467POLR2K10070.000Heterocephalus_glaber_male
ENSAMXG00000038868-10065.000ENSHCOG00000016287polr2k10065.000Hippocampus_comes
ENSAMXG00000038868-8063.265ENSSTOG00000032566-9663.265Ictidomys_tridecemlineatus
ENSAMXG00000038868-10070.000ENSSTOG00000006123-10070.000Ictidomys_tridecemlineatus
ENSAMXG00000038868-10070.000ENSJJAG00000000271-10070.000Jaculus_jaculus
ENSAMXG00000038868-9866.102ENSJJAG00000012986-9866.102Jaculus_jaculus
ENSAMXG00000038868-10065.625ENSJJAG00000016100-10065.625Jaculus_jaculus
ENSAMXG00000038868-8966.667ENSJJAG00000000698-9366.667Jaculus_jaculus
ENSAMXG00000038868-10070.000ENSJJAG00000014209-10070.000Jaculus_jaculus
ENSAMXG00000038868-10071.667ENSKMAG00000016379-10071.667Kryptolebias_marmoratus
ENSAMXG00000038868-10071.667ENSKMAG00000007731polr2k10071.667Kryptolebias_marmoratus
ENSAMXG00000038868-10071.667ENSLBEG00000027114polr2k10071.667Labrus_bergylta
ENSAMXG00000038868-10073.770ENSLACG00000015753POLR2K10073.770Latimeria_chalumnae
ENSAMXG00000038868-10071.667ENSLOCG00000009730polr2k10071.667Lepisosteus_oculatus
ENSAMXG00000038868-9866.102ENSLAFG00000005254-10066.102Loxodonta_africana
ENSAMXG00000038868-9846.479ENSMFAG00000039166-10046.479Macaca_fascicularis
ENSAMXG00000038868-10070.000ENSMFAG00000030863-10070.000Macaca_fascicularis
ENSAMXG00000038868-9862.712ENSMMUG00000040264-10062.712Macaca_mulatta
ENSAMXG00000038868-10070.000ENSMMUG00000020714-10070.000Macaca_mulatta
ENSAMXG00000038868-10070.000ENSMNEG00000023503-10070.000Macaca_nemestrina
ENSAMXG00000038868-9842.254ENSMNEG00000033552-10046.479Macaca_nemestrina
ENSAMXG00000038868-9358.929ENSMLEG00000012572-7958.929Mandrillus_leucophaeus
ENSAMXG00000038868-10070.000ENSMLEG00000038200POLR2K10070.000Mandrillus_leucophaeus
ENSAMXG00000038868-10071.667ENSMAMG00000014290polr2k10071.667Mastacembelus_armatus
ENSAMXG00000038868-10071.667ENSMZEG00005003220polr2k10071.667Maylandia_zebra
ENSAMXG00000038868-10070.000ENSMAUG00000010288Polr2k10070.000Mesocricetus_auratus
ENSAMXG00000038868-10070.000ENSMICG00000044624POLR2K10070.000Microcebus_murinus
ENSAMXG00000038868-10070.000ENSMOCG00000009880Polr2k10070.000Microtus_ochrogaster
ENSAMXG00000038868-10071.667ENSMMOG00000017945polr2k10071.667Mola_mola
ENSAMXG00000038868-10070.000ENSMODG00000006312POLR2K10070.000Monodelphis_domestica
ENSAMXG00000038868-10070.000MGP_CAROLIEiJ_G0019735Polr2k10070.000Mus_caroli
ENSAMXG00000038868-10070.000ENSMUSG00000045996Polr2k10070.000Mus_musculus
ENSAMXG00000038868-10070.000MGP_PahariEiJ_G0019744-10070.000Mus_pahari
ENSAMXG00000038868-10068.333MGP_SPRETEiJ_G0020631Polr2k10068.333Mus_spretus
ENSAMXG00000038868-10070.000ENSMLUG00000030053-10070.000Myotis_lucifugus
ENSAMXG00000038868-9867.797ENSMLUG00000029803-10067.797Myotis_lucifugus
ENSAMXG00000038868-10070.000ENSNGAG00000020950Polr2k10070.000Nannospalax_galili
ENSAMXG00000038868-10071.667ENSNBRG00000013533polr2k10071.667Neolamprologus_brichardi
ENSAMXG00000038868-9158.182ENSNLEG00000018544-9658.182Nomascus_leucogenys
ENSAMXG00000038868-8567.308ENSNLEG00000031897-6867.308Nomascus_leucogenys
ENSAMXG00000038868-10070.000ENSMEUG00000000401POLR2K10070.000Notamacropus_eugenii
ENSAMXG00000038868-10056.667ENSOPRG00000010172-10056.667Ochotona_princeps
ENSAMXG00000038868-10060.000ENSOPRG00000015675-10060.000Ochotona_princeps
ENSAMXG00000038868-10070.000ENSOPRG00000009562-10070.000Ochotona_princeps
ENSAMXG00000038868-10061.667ENSOPRG00000005504-10061.667Ochotona_princeps
ENSAMXG00000038868-10068.333ENSODEG00000019784-10068.333Octodon_degus
ENSAMXG00000038868-10060.000ENSODEG00000020129-10060.000Octodon_degus
ENSAMXG00000038868-10066.667ENSODEG00000018618-10066.667Octodon_degus
ENSAMXG00000038868-9864.407ENSODEG00000019324-9864.407Octodon_degus
ENSAMXG00000038868-10065.000ENSODEG00000020322-10065.000Octodon_degus
ENSAMXG00000038868-10068.333ENSODEG00000004358-10068.333Octodon_degus
ENSAMXG00000038868-10070.000ENSOCUG00000029376-10070.000Oryctolagus_cuniculus
ENSAMXG00000038868-10068.333ENSOCUG00000016854-10068.333Oryctolagus_cuniculus
ENSAMXG00000038868-10071.667ENSORLG00015010501polr2k10071.667Oryzias_latipes_hsok
ENSAMXG00000038868-10070.000ENSOARG00000001480POLR2K10070.000Ovis_aries
ENSAMXG00000038868-10070.000ENSPPAG00000040441POLR2K10070.000Pan_paniscus
ENSAMXG00000038868-10070.000ENSPTRG00000020470POLR2K10070.000Pan_troglodytes
ENSAMXG00000038868-10070.000ENSPANG00000011129-10070.000Papio_anubis
ENSAMXG00000038868-10071.667ENSPSIG00000004097POLR2K10071.667Pelodiscus_sinensis
ENSAMXG00000038868-10071.667ENSPMGG00000022982polr2k10071.667Periophthalmus_magnuspinnatus
ENSAMXG00000038868-10070.000ENSPEMG00000012015-10070.000Peromyscus_maniculatus_bairdii
ENSAMXG00000038868-10060.000ENSPEMG00000008788-10060.000Peromyscus_maniculatus_bairdii
ENSAMXG00000038868-10061.667ENSPEMG00000001038-7261.667Peromyscus_maniculatus_bairdii
ENSAMXG00000038868-10071.667ENSPMEG00000022211polr2k10071.667Poecilia_mexicana
ENSAMXG00000038868-10070.000ENSPPYG00000018786POLR2K10070.000Pongo_abelii
ENSAMXG00000038868-10070.000ENSPCAG00000000746POLR2K10070.000Procavia_capensis
ENSAMXG00000038868-10068.333ENSPCOG00000007173-10068.333Propithecus_coquereli
ENSAMXG00000038868-10070.000ENSPCOG00000026981-10070.000Propithecus_coquereli
ENSAMXG00000038868-10070.000ENSPVAG00000009991POLR2K10070.000Pteropus_vampyrus
ENSAMXG00000038868-10071.667ENSPNYG00000012241polr2k10071.667Pundamilia_nyererei
ENSAMXG00000038868-10070.000ENSRNOG00000010408Polr2k10070.000Rattus_norvegicus
ENSAMXG00000038868-10070.000ENSRBIG00000035082POLR2K10070.000Rhinopithecus_bieti
ENSAMXG00000038868-9857.627ENSRBIG00000032617-8057.627Rhinopithecus_bieti
ENSAMXG00000038868-9857.627ENSRROG00000036861-8057.627Rhinopithecus_roxellana
ENSAMXG00000038868-10070.000ENSRROG00000043844-10070.000Rhinopithecus_roxellana
ENSAMXG00000038868-8951.852ENSSBOG00000028601-10051.852Saimiri_boliviensis_boliviensis
ENSAMXG00000038868-10068.333ENSSBOG00000019574-10068.333Saimiri_boliviensis_boliviensis
ENSAMXG00000038868-10070.000ENSSBOG00000010968-10070.000Saimiri_boliviensis_boliviensis
ENSAMXG00000038868-10070.000ENSSHAG00000006381POLR2K10070.000Sarcophilus_harrisii
ENSAMXG00000038868-10073.333ENSSFOG00015002881polr2k10073.333Scleropages_formosus
ENSAMXG00000038868-10071.667ENSSMAG00000007196polr2k10071.667Scophthalmus_maximus
ENSAMXG00000038868-10071.667ENSSLDG00000013975polr2k10071.667Seriola_lalandi_dorsalis
ENSAMXG00000038868-8270.000ENSSARG00000001557POLR2K9870.000Sorex_araneus
ENSAMXG00000038868-10071.667ENSSPUG00000018205POLR2K10071.667Sphenodon_punctatus
ENSAMXG00000038868-10063.333ENSSSCG00000037160-10063.333Sus_scrofa
ENSAMXG00000038868-8466.667ENSSSCG00000036795-10066.667Sus_scrofa
ENSAMXG00000038868-10070.000ENSSSCG00000021180POLR2K10070.000Sus_scrofa
ENSAMXG00000038868-10071.667ENSTGUG00000012051-10071.667Taeniopygia_guttata
ENSAMXG00000038868-10071.667ENSTGUG00000018366-10071.667Taeniopygia_guttata
ENSAMXG00000038868-10070.000ENSTBEG00000010260-10070.000Tupaia_belangeri
ENSAMXG00000038868-9866.667ENSTBEG00000003799-9866.667Tupaia_belangeri
ENSAMXG00000038868-10070.000ENSTTRG00000007489POLR2K10070.000Tursiops_truncatus
ENSAMXG00000038868-9650.000ENSUAMG00000008073-8250.000Ursus_americanus
ENSAMXG00000038868-10070.000ENSUMAG00000017508-10070.000Ursus_maritimus
ENSAMXG00000038868-9650.000ENSUMAG00000021763-8250.000Ursus_maritimus
ENSAMXG00000038868-10070.000ENSVPAG00000009630POLR2K10070.000Vicugna_pacos
ENSAMXG00000038868-10068.333ENSXETG00000025929polr2k10068.333Xenopus_tropicalis

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