EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038869 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7296 bases
Position: chrAPWO02000099.1:318589-325884
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036216	Exo_endo_phos	PF03372.23	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053037	-	729	-	ENSAMXP00000036216	242 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038869	-	81	30.198	ENSAMXG00000040050	-	73	30.198
ENSAMXG00000038869	-	82	32.701	ENSAMXG00000025279	-	82	32.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038869	-	80	38.071	ENSAOCG00000015879	-	54	38.071	Amphiprion_ocellaris
ENSAMXG00000038869	-	80	33.838	ENSAPEG00000018746	-	90	33.838	Amphiprion_percula
ENSAMXG00000038869	-	83	37.129	ENSORLG00000026779	-	87	37.129	Oryzias_latipes
ENSAMXG00000038869	-	80	39.796	ENSORLG00020009566	-	78	39.796	Oryzias_latipes_hni
ENSAMXG00000038869	-	83	35.149	ENSORLG00020000130	-	77	35.149	Oryzias_latipes_hni
ENSAMXG00000038869	-	83	39.109	ENSORLG00015011380	-	81	39.109	Oryzias_latipes_hsok
ENSAMXG00000038869	-	62	40.940	ENSSLDG00000010955	-	87	41.333	Seriola_lalandi_dorsalis