EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038901 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5259 bases
Position: chr10:30361809-30367067
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000031227	RVT_1	PF00078.27	2.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053170	-	1410	-	ENSAMXP00000031227	469 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038901	-	51	32.258	ENSAMXG00000041014	-	92	32.258
ENSAMXG00000038901	-	92	42.630	ENSAMXG00000035718	-	81	42.630
ENSAMXG00000038901	-	85	92.481	ENSAMXG00000033384	-	68	92.481
ENSAMXG00000038901	-	87	44.203	ENSAMXG00000032036	-	55	44.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038901	-	59	30.420	ENSAPOG00000015742	-	90	30.420	Acanthochromis_polyacanthus
ENSAMXG00000038901	-	80	45.000	ENSACIG00000020856	-	82	45.000	Amphilophus_citrinellus
ENSAMXG00000038901	-	65	30.159	ENSACIG00000010538	-	82	30.159	Amphilophus_citrinellus
ENSAMXG00000038901	-	75	40.449	ENSACIG00000020849	-	86	40.449	Amphilophus_citrinellus
ENSAMXG00000038901	-	64	43.791	ENSATEG00000019721	-	80	43.791	Anabas_testudineus
ENSAMXG00000038901	-	72	33.616	ENSACAG00000010816	-	99	33.616	Anolis_carolinensis
ENSAMXG00000038901	-	77	30.997	ENSACLG00000011319	-	97	30.997	Astatotilapia_calliptera
ENSAMXG00000038901	-	81	31.186	ENSACLG00000011312	-	57	31.186	Astatotilapia_calliptera
ENSAMXG00000038901	-	70	30.347	ENSACLG00000013571	-	84	30.347	Astatotilapia_calliptera
ENSAMXG00000038901	-	77	32.976	ENSCVAG00000007707	-	55	32.976	Cyprinodon_variegatus
ENSAMXG00000038901	-	61	32.203	ENSELUG00000000386	-	65	32.203	Esox_lucius
ENSAMXG00000038901	-	61	40.484	ENSHBUG00000003796	-	83	34.545	Haplochromis_burtoni
ENSAMXG00000038901	-	64	31.329	ENSIPUG00000010242	-	82	31.329	Ictalurus_punctatus
ENSAMXG00000038901	-	61	31.633	ENSLBEG00000020242	-	80	31.633	Labrus_bergylta
ENSAMXG00000038901	-	85	31.719	ENSLACG00000022265	-	54	31.719	Latimeria_chalumnae
ENSAMXG00000038901	-	81	31.043	ENSMZEG00005025877	-	92	31.043	Maylandia_zebra
ENSAMXG00000038901	-	81	30.256	ENSMZEG00005017030	-	72	30.256	Maylandia_zebra
ENSAMXG00000038901	-	81	31.043	ENSMZEG00005008304	-	92	31.043	Maylandia_zebra
ENSAMXG00000038901	-	81	30.256	ENSMZEG00005011529	-	72	30.256	Maylandia_zebra
ENSAMXG00000038901	-	57	35.055	ENSMZEG00005016362	-	95	35.055	Maylandia_zebra
ENSAMXG00000038901	-	69	41.515	ENSNBRG00000001934	-	71	41.515	Neolamprologus_brichardi
ENSAMXG00000038901	-	71	43.363	ENSNBRG00000022130	-	82	43.363	Neolamprologus_brichardi
ENSAMXG00000038901	-	56	34.340	ENSORLG00000028454	-	84	34.340	Oryzias_latipes
ENSAMXG00000038901	-	52	30.980	ENSORLG00020022004	-	85	30.980	Oryzias_latipes_hni
ENSAMXG00000038901	-	51	30.453	ENSORLG00020007002	-	96	30.453	Oryzias_latipes_hni
ENSAMXG00000038901	-	55	31.227	ENSORLG00015021848	-	86	31.227	Oryzias_latipes_hsok
ENSAMXG00000038901	-	63	31.715	ENSORLG00015020895	-	82	31.715	Oryzias_latipes_hsok
ENSAMXG00000038901	-	53	32.950	ENSORLG00015000419	-	74	32.950	Oryzias_latipes_hsok
ENSAMXG00000038901	-	77	30.997	ENSPLAG00000015080	-	87	30.997	Poecilia_latipinna
ENSAMXG00000038901	-	71	30.725	ENSPREG00000004933	-	87	30.725	Poecilia_reticulata
ENSAMXG00000038901	-	64	31.699	ENSPREG00000010319	-	73	31.699	Poecilia_reticulata
ENSAMXG00000038901	-	57	30.325	ENSPNYG00000002466	-	92	30.325	Pundamilia_nyererei
ENSAMXG00000038901	-	70	41.543	ENSPNYG00000002652	-	88	41.543	Pundamilia_nyererei
ENSAMXG00000038901	-	61	30.201	ENSPNYG00000023697	-	69	30.201	Pundamilia_nyererei
ENSAMXG00000038901	-	83	30.882	ENSPNAG00000024749	-	93	30.882	Pygocentrus_nattereri
ENSAMXG00000038901	-	74	30.919	ENSPNAG00000014375	-	87	30.919	Pygocentrus_nattereri
ENSAMXG00000038901	-	60	30.450	ENSSMAG00000014015	-	63	30.450	Scophthalmus_maximus
ENSAMXG00000038901	-	63	36.093	ENSSDUG00000015364	-	65	36.093	Seriola_dumerili
ENSAMXG00000038901	-	88	31.915	ENSXETG00000032308	-	50	31.915	Xenopus_tropicalis
ENSAMXG00000038901	-	56	33.704	ENSXCOG00000016894	-	80	33.704	Xiphophorus_couchianus
ENSAMXG00000038901	-	63	31.353	ENSXMAG00000023211	-	68	31.353	Xiphophorus_maculatus
ENSAMXG00000038901	-	52	31.707	ENSXMAG00000026184	-	82	31.707	Xiphophorus_maculatus