EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038945 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5497 bases
Position: chr17:7851249-7856745
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039186	Transposase_22	PF02994.14	8.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046105	-	948	-	ENSAMXP00000039186	315 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038945's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038945	-	55	51.744	ENSAMXG00000041578	-	67	51.744
ENSAMXG00000038945	-	67	45.024	ENSAMXG00000038779	-	83	45.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038945	-	55	44.000	ENSKMAG00000003890	-	86	44.000	Kryptolebias_marmoratus
ENSAMXG00000038945	-	52	43.976	ENSKMAG00000001064	-	71	43.976	Kryptolebias_marmoratus
ENSAMXG00000038945	-	50	44.654	ENSKMAG00000015348	-	78	44.654	Kryptolebias_marmoratus
ENSAMXG00000038945	-	57	43.243	ENSKMAG00000010459	-	85	43.243	Kryptolebias_marmoratus
ENSAMXG00000038945	-	87	32.877	ENSPLAG00000016788	-	85	32.404	Poecilia_latipinna
ENSAMXG00000038945	-	69	40.092	ENSPNAG00000014260	-	79	40.092	Pygocentrus_nattereri
ENSAMXG00000038945	-	54	44.509	ENSPNAG00000001558	-	81	44.509	Pygocentrus_nattereri
ENSAMXG00000038945	-	65	40.000	ENSPNAG00000011528	-	90	40.000	Pygocentrus_nattereri
ENSAMXG00000038945	-	68	45.327	ENSPNAG00000018026	-	90	45.327	Pygocentrus_nattereri
ENSAMXG00000038945	-	53	44.048	ENSSDUG00000017942	-	74	44.048	Seriola_dumerili