EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038984 (Gene tree)
Gene ID: 103046811
Gene Symbol: snrpd3l
Alias: wu:fa18f04|zgc:56125
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4413 bases
Position: chr14:29476460-29480872
Accession: 103046811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036274	LSM	PF01423.22	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048537	-	2278	XM_007233901	ENSAMXP00000036274	128 (aa)	XP_007233963	W5KT25

Gene Model

Click here to download ENSAMXG00000038984's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038984	snrpd3l	100	95.312	ENSG00000100028	SNRPD3	98	98.361	Homo_sapiens
ENSAMXG00000038984	snrpd3l	100	96.875	ENSAPOG00000007512	snrpd3l	100	96.875	Acanthochromis_polyacanthus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSAMEG00000013935	SNRPD3	100	95.312	Ailuropoda_melanoleuca
ENSAMXG00000038984	snrpd3l	100	96.875	ENSACIG00000008871	snrpd3l	100	96.875	Amphilophus_citrinellus
ENSAMXG00000038984	snrpd3l	83	98.113	ENSAOCG00000016759	-	98	98.113	Amphiprion_ocellaris
ENSAMXG00000038984	snrpd3l	100	96.875	ENSAOCG00000008497	SNRPD3	100	96.875	Amphiprion_ocellaris
ENSAMXG00000038984	snrpd3l	100	96.875	ENSAOCG00000016743	snrpd3l	100	96.875	Amphiprion_ocellaris
ENSAMXG00000038984	snrpd3l	100	96.875	ENSAOCG00000022442	-	100	96.875	Amphiprion_ocellaris
ENSAMXG00000038984	snrpd3l	100	96.875	ENSAPEG00000006273	snrpd3l	100	96.875	Amphiprion_percula
ENSAMXG00000038984	snrpd3l	83	98.113	ENSAPEG00000006260	-	98	98.113	Amphiprion_percula
ENSAMXG00000038984	snrpd3l	100	96.875	ENSATEG00000020556	snrpd3l	91	96.875	Anabas_testudineus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSAPLG00000008670	SNRPD3	100	95.312	Anas_platyrhynchos
ENSAMXG00000038984	snrpd3l	100	95.312	ENSANAG00000026106	SNRPD3	100	95.312	Aotus_nancymaae
ENSAMXG00000038984	snrpd3l	100	96.875	ENSACLG00000021295	snrpd3l	100	96.875	Astatotilapia_calliptera
ENSAMXG00000038984	snrpd3l	100	95.312	ENSBTAG00000021262	SNRPD3	100	95.312	Bos_taurus
ENSAMXG00000038984	snrpd3l	89	64.348	WBGene00004914	snr-1	63	74.118	Caenorhabditis_elegans
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCJAG00000009630	SNRPD3	100	95.312	Callithrix_jacchus
ENSAMXG00000038984	snrpd3l	100	94.531	ENSCAFG00000017258	-	100	94.531	Canis_familiaris
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCAFG00000013864	-	100	95.312	Canis_familiaris
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCAFG00020007165	-	100	95.312	Canis_lupus_dingo
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCHIG00000000057	SNRPD3	100	95.312	Capra_hircus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSTSYG00000007649	SNRPD3	100	95.312	Carlito_syrichta
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCAPG00000016432	-	100	95.312	Cavia_aperea
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCPOG00000033102	-	100	95.312	Cavia_porcellus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCCAG00000035006	SNRPD3	100	95.312	Cebus_capucinus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCATG00000038878	SNRPD3	100	95.312	Cercocebus_atys
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCLAG00000011403	SNRPD3	100	95.312	Chinchilla_lanigera
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCSAG00000010694	SNRPD3	100	95.312	Chlorocebus_sabaeus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCPBG00000002065	SNRPD3	100	95.312	Chrysemys_picta_bellii
ENSAMXG00000038984	snrpd3l	84	78.505	ENSCSAVG00000004708	-	80	77.570	Ciona_savignyi
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCANG00000032106	SNRPD3	100	95.312	Colobus_angolensis_palliatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCGRG00001021990	Snrpd3	100	95.312	Cricetulus_griseus_chok1gshd
ENSAMXG00000038984	snrpd3l	100	95.312	ENSCGRG00000004280	Snrpd3	100	95.312	Cricetulus_griseus_crigri
ENSAMXG00000038984	snrpd3l	100	96.094	ENSCVAG00000001276	snrpd3l	100	96.094	Cyprinodon_variegatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSDARG00000013800	snrpd3	100	95.312	Danio_rerio
ENSAMXG00000038984	snrpd3l	100	99.219	ENSDARG00000076283	snrpd3l	100	99.219	Danio_rerio
ENSAMXG00000038984	snrpd3l	97	73.387	ENSDNOG00000042638	-	100	71.774	Dasypus_novemcinctus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSDNOG00000047424	-	100	95.312	Dasypus_novemcinctus
ENSAMXG00000038984	snrpd3l	100	85.496	ENSDNOG00000018004	-	100	83.206	Dasypus_novemcinctus
ENSAMXG00000038984	snrpd3l	100	69.531	ENSDORG00000027169	-	100	67.188	Dipodomys_ordii
ENSAMXG00000038984	snrpd3l	100	80.469	ENSDORG00000027706	-	100	78.125	Dipodomys_ordii
ENSAMXG00000038984	snrpd3l	88	86.607	ENSDORG00000002800	-	100	83.929	Dipodomys_ordii
ENSAMXG00000038984	snrpd3l	83	83.019	FBgn0023167	SmD3	71	82.243	Drosophila_melanogaster
ENSAMXG00000038984	snrpd3l	100	95.312	ENSEASG00005000273	SNRPD3	100	95.312	Equus_asinus_asinus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSECAG00000023316	SNRPD3	100	95.312	Equus_caballus
ENSAMXG00000038984	snrpd3l	100	94.531	ENSEEUG00000015518	SNRPD3	100	94.531	Erinaceus_europaeus
ENSAMXG00000038984	snrpd3l	100	96.094	ENSELUG00000001854	snrpd3	100	96.094	Esox_lucius
ENSAMXG00000038984	snrpd3l	100	96.875	ENSELUG00000010092	snrpd3l	100	96.875	Esox_lucius
ENSAMXG00000038984	snrpd3l	100	95.312	ENSFCAG00000001512	SNRPD3	100	95.312	Felis_catus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSFALG00000007303	SNRPD3	100	95.312	Ficedula_albicollis
ENSAMXG00000038984	snrpd3l	100	95.312	ENSFDAG00000010772	SNRPD3	100	95.312	Fukomys_damarensis
ENSAMXG00000038984	snrpd3l	100	96.875	ENSFHEG00000010754	snrpd3l	100	96.875	Fundulus_heteroclitus
ENSAMXG00000038984	snrpd3l	100	96.124	ENSGMOG00000008469	snrpd3l	100	96.124	Gadus_morhua
ENSAMXG00000038984	snrpd3l	100	95.312	ENSGALG00000006596	SNRPD3	100	95.312	Gallus_gallus
ENSAMXG00000038984	snrpd3l	83	98.113	ENSGAFG00000006661	snrpd3l	82	98.113	Gambusia_affinis
ENSAMXG00000038984	snrpd3l	100	96.124	ENSGACG00000017533	snrpd3l	100	96.124	Gasterosteus_aculeatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSGAGG00000023325	SNRPD3	100	95.312	Gopherus_agassizii
ENSAMXG00000038984	snrpd3l	100	95.312	ENSGGOG00000015640	SNRPD3	100	95.312	Gorilla_gorilla
ENSAMXG00000038984	snrpd3l	100	96.875	ENSHBUG00000001332	snrpd3l	100	96.875	Haplochromis_burtoni
ENSAMXG00000038984	snrpd3l	100	95.312	ENSHGLG00000016496	SNRPD3	100	95.312	Heterocephalus_glaber_female
ENSAMXG00000038984	snrpd3l	99	91.339	ENSHGLG00000009844	-	99	88.976	Heterocephalus_glaber_female
ENSAMXG00000038984	snrpd3l	99	91.339	ENSHGLG00100011326	-	99	88.976	Heterocephalus_glaber_male
ENSAMXG00000038984	snrpd3l	100	95.312	ENSHGLG00100019304	SNRPD3	100	95.312	Heterocephalus_glaber_male
ENSAMXG00000038984	snrpd3l	100	96.094	ENSHCOG00000014396	snrpd3l	100	96.094	Hippocampus_comes
ENSAMXG00000038984	snrpd3l	100	97.656	ENSIPUG00000003083	snrpd3	100	97.656	Ictalurus_punctatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSSTOG00000025674	SNRPD3	100	95.312	Ictidomys_tridecemlineatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSJJAG00000013303	Snrpd3	100	95.312	Jaculus_jaculus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSKMAG00000012493	snrpd3l	100	96.875	Kryptolebias_marmoratus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSLBEG00000003202	snrpd3l	100	96.875	Labrus_bergylta
ENSAMXG00000038984	snrpd3l	100	94.531	ENSLACG00000015192	SNRPD3	100	94.531	Latimeria_chalumnae
ENSAMXG00000038984	snrpd3l	100	96.875	ENSLOCG00000006978	snrpd3	100	96.875	Lepisosteus_oculatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSLAFG00000028180	SNRPD3	100	95.312	Loxodonta_africana
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMFAG00000033628	SNRPD3	100	95.312	Macaca_fascicularis
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMMUG00000000264	SNRPD3	100	95.312	Macaca_mulatta
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMNEG00000020857	SNRPD3	100	95.312	Macaca_nemestrina
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMLEG00000037548	SNRPD3	100	95.312	Mandrillus_leucophaeus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSMZEG00005017664	snrpd3l	100	96.875	Maylandia_zebra
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMAUG00000021393	Snrpd3	100	95.312	Mesocricetus_auratus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMICG00000034782	SNRPD3	100	95.312	Microcebus_murinus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMOCG00000009361	Snrpd3	100	95.312	Microtus_ochrogaster
ENSAMXG00000038984	snrpd3l	83	98.113	ENSMMOG00000020985	snrpd3l	67	98.113	Mola_mola
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMODG00000004024	SNRPD3	100	95.312	Monodelphis_domestica
ENSAMXG00000038984	snrpd3l	100	96.875	ENSMALG00000013334	snrpd3l	100	96.875	Monopterus_albus
ENSAMXG00000038984	snrpd3l	100	95.312	MGP_CAROLIEiJ_G0015441	Snrpd3	100	95.312	Mus_caroli
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMUSG00000020180	Snrpd3	100	95.312	Mus_musculus
ENSAMXG00000038984	snrpd3l	100	95.312	MGP_PahariEiJ_G0030857	Snrpd3	100	95.312	Mus_pahari
ENSAMXG00000038984	snrpd3l	100	95.312	MGP_SPRETEiJ_G0016254	Snrpd3	100	95.312	Mus_spretus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMPUG00000002889	SNRPD3	100	95.312	Mustela_putorius_furo
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMLUG00000009838	SNRPD3	100	95.312	Myotis_lucifugus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSNGAG00000010328	Snrpd3	100	95.312	Nannospalax_galili
ENSAMXG00000038984	snrpd3l	100	96.875	ENSNBRG00000020307	snrpd3l	100	96.875	Neolamprologus_brichardi
ENSAMXG00000038984	snrpd3l	100	95.312	ENSNLEG00000035757	SNRPD3	100	95.312	Nomascus_leucogenys
ENSAMXG00000038984	snrpd3l	100	95.312	ENSMEUG00000003772	SNRPD3	100	95.312	Notamacropus_eugenii
ENSAMXG00000038984	snrpd3l	100	95.312	ENSOPRG00000005763	SNRPD3	100	95.312	Ochotona_princeps
ENSAMXG00000038984	snrpd3l	100	94.531	ENSODEG00000019354	-	100	94.531	Octodon_degus
ENSAMXG00000038984	snrpd3l	100	92.188	ENSODEG00000020162	-	100	89.062	Octodon_degus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSODEG00000008064	-	100	95.312	Octodon_degus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSONIG00000003828	snrpd3l	100	96.875	Oreochromis_niloticus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSOANG00000002463	SNRPD3	100	95.312	Ornithorhynchus_anatinus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSOCUG00000004845	SNRPD3	100	95.312	Oryctolagus_cuniculus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSORLG00000010586	snrpd3l	100	96.875	Oryzias_latipes
ENSAMXG00000038984	snrpd3l	100	96.875	ENSORLG00020011769	snrpd3l	100	96.875	Oryzias_latipes_hni
ENSAMXG00000038984	snrpd3l	100	96.875	ENSORLG00015022940	snrpd3l	100	96.875	Oryzias_latipes_hsok
ENSAMXG00000038984	snrpd3l	100	96.875	ENSOMEG00000022734	snrpd3l	100	96.875	Oryzias_melastigma
ENSAMXG00000038984	snrpd3l	100	95.312	ENSOGAG00000012708	SNRPD3	100	95.312	Otolemur_garnettii
ENSAMXG00000038984	snrpd3l	100	95.312	ENSOARG00000013984	SNRPD3	100	95.312	Ovis_aries
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPPAG00000039191	SNRPD3	100	95.312	Pan_paniscus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPPRG00000001470	SNRPD3	100	95.312	Panthera_pardus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPTIG00000016610	SNRPD3	100	95.312	Panthera_tigris_altaica
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPTRG00000014176	SNRPD3	100	95.312	Pan_troglodytes
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPANG00000009279	SNRPD3	100	95.312	Papio_anubis
ENSAMXG00000038984	snrpd3l	100	96.875	ENSPKIG00000006412	snrpd3l	100	96.875	Paramormyrops_kingsleyae
ENSAMXG00000038984	snrpd3l	100	93.750	ENSPSIG00000010022	-	100	90.625	Pelodiscus_sinensis
ENSAMXG00000038984	snrpd3l	84	97.222	ENSPMGG00000004486	snrpd3l	87	97.196	Periophthalmus_magnuspinnatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPCIG00000010910	SNRPD3	84	95.312	Phascolarctos_cinereus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSPFOG00000019673	snrpd3l	100	96.875	Poecilia_formosa
ENSAMXG00000038984	snrpd3l	100	96.875	ENSPLAG00000023249	snrpd3l	100	96.875	Poecilia_latipinna
ENSAMXG00000038984	snrpd3l	100	96.875	ENSPMEG00000008482	snrpd3l	100	96.875	Poecilia_mexicana
ENSAMXG00000038984	snrpd3l	83	98.113	ENSPREG00000007532	snrpd3l	87	98.113	Poecilia_reticulata
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPPYG00000011648	SNRPD3	100	95.312	Pongo_abelii
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPCAG00000002065	SNRPD3	100	95.312	Procavia_capensis
ENSAMXG00000038984	snrpd3l	100	95.312	ENSPCOG00000011842	SNRPD3	100	95.312	Propithecus_coquereli
ENSAMXG00000038984	snrpd3l	100	94.531	ENSPVAG00000011405	SNRPD3	100	94.531	Pteropus_vampyrus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSPNYG00000013344	snrpd3l	100	96.875	Pundamilia_nyererei
ENSAMXG00000038984	snrpd3l	100	96.094	ENSPNAG00000010547	snrpd3	100	96.094	Pygocentrus_nattereri
ENSAMXG00000038984	snrpd3l	100	99.219	ENSPNAG00000008683	snrpd3l	100	99.219	Pygocentrus_nattereri
ENSAMXG00000038984	snrpd3l	100	95.312	ENSRNOG00000050410	Snrpd3	100	95.312	Rattus_norvegicus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSRBIG00000029017	SNRPD3	100	95.312	Rhinopithecus_bieti
ENSAMXG00000038984	snrpd3l	100	95.312	ENSRROG00000031152	SNRPD3	100	95.312	Rhinopithecus_roxellana
ENSAMXG00000038984	snrpd3l	74	47.368	YLR147C	SMD3	80	50.617	Saccharomyces_cerevisiae
ENSAMXG00000038984	snrpd3l	100	96.875	ENSSFOG00015007002	snrpd3l	100	96.875	Scleropages_formosus
ENSAMXG00000038984	snrpd3l	100	93.750	ENSSFOG00015014180	snrpd3l	100	88.281	Scleropages_formosus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSSMAG00000019307	snrpd3l	100	96.875	Scophthalmus_maximus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSSDUG00000006870	snrpd3l	100	96.875	Seriola_dumerili
ENSAMXG00000038984	snrpd3l	100	96.875	ENSSLDG00000022664	snrpd3l	100	96.875	Seriola_lalandi_dorsalis
ENSAMXG00000038984	snrpd3l	100	95.312	ENSSARG00000002357	SNRPD3	100	95.312	Sorex_araneus
ENSAMXG00000038984	snrpd3l	100	94.531	ENSSPUG00000014285	SNRPD3	100	94.531	Sphenodon_punctatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSSSCG00000010058	SNRPD3	100	95.312	Sus_scrofa
ENSAMXG00000038984	snrpd3l	100	95.312	ENSTGUG00000010079	SNRPD3	100	95.312	Taeniopygia_guttata
ENSAMXG00000038984	snrpd3l	83	98.113	ENSTRUG00000023976	snrpd3l	90	98.113	Takifugu_rubripes
ENSAMXG00000038984	snrpd3l	100	96.875	ENSTNIG00000005323	snrpd3l	100	96.875	Tetraodon_nigroviridis
ENSAMXG00000038984	snrpd3l	100	95.312	ENSTBEG00000014334	SNRPD3	100	95.312	Tupaia_belangeri
ENSAMXG00000038984	snrpd3l	100	95.312	ENSTTRG00000006022	SNRPD3	100	95.312	Tursiops_truncatus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSUAMG00000010767	SNRPD3	100	95.312	Ursus_americanus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSUMAG00000001670	SNRPD3	100	95.312	Ursus_maritimus
ENSAMXG00000038984	snrpd3l	100	95.312	ENSVPAG00000000241	SNRPD3	100	95.312	Vicugna_pacos
ENSAMXG00000038984	snrpd3l	83	98.113	ENSVVUG00000019340	SNRPD3	53	98.113	Vulpes_vulpes
ENSAMXG00000038984	snrpd3l	100	80.000	ENSXETG00000024918	snrpd3	65	97.590	Xenopus_tropicalis
ENSAMXG00000038984	snrpd3l	100	96.875	ENSXCOG00000004795	snrpd3l	100	96.875	Xiphophorus_couchianus
ENSAMXG00000038984	snrpd3l	100	96.875	ENSXMAG00000001133	snrpd3l	100	96.875	Xiphophorus_maculatus