EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038994 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3394 bases
Position: chr2:14879562-14882955
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000054721	cwf21	PF08312.12	5.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053117	-	624	-	ENSAMXP00000054721	207 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038994	-	90	51.031	ENSG00000167978	SRRM2	85	62.000	Homo_sapiens
ENSAMXG00000038994	-	82	90.000	ENSACIG00000023341	-	85	90.132	Amphilophus_citrinellus
ENSAMXG00000038994	-	74	59.119	ENSCPBG00000005984	-	62	59.236	Chrysemys_picta_bellii
ENSAMXG00000038994	-	90	86.096	ENSCSEG00000009971	-	75	88.158	Cynoglossus_semilaevis
ENSAMXG00000038994	-	74	54.321	ENSGALG00000047953	-	62	54.717	Gallus_gallus
ENSAMXG00000038994	-	57	39.062	ENSGACG00000020232	-	61	33.333	Gasterosteus_aculeatus
ENSAMXG00000038994	-	86	86.034	ENSLBEG00000007729	-	84	87.500	Labrus_bergylta
ENSAMXG00000038994	-	90	51.309	MGP_CAROLIEiJ_G0021161	Srrm2	89	58.065	Mus_caroli
ENSAMXG00000038994	-	97	50.244	ENSMUSG00000039218	Srrm2	89	58.065	Mus_musculus
ENSAMXG00000038994	-	90	51.832	MGP_PahariEiJ_G0023478	Srrm2	89	58.710	Mus_pahari
ENSAMXG00000038994	-	90	51.309	MGP_SPRETEiJ_G0022071	Srrm2	89	58.065	Mus_spretus
ENSAMXG00000038994	-	90	85.561	ENSPMGG00000000733	-	87	86.034	Periophthalmus_magnuspinnatus
ENSAMXG00000038994	-	66	88.321	ENSPNYG00000009463	-	55	89.320	Pundamilia_nyererei
ENSAMXG00000038994	-	92	95.789	ENSPNAG00000018911	-	86	96.648	Pygocentrus_nattereri
ENSAMXG00000038994	-	90	88.770	ENSSLDG00000003595	-	64	90.132	Seriola_lalandi_dorsalis
ENSAMXG00000038994	-	50	62.136	ENSSPUG00000003428	-	84	62.000	Sphenodon_punctatus
ENSAMXG00000038994	-	90	86.559	ENSXCOG00000000148	-	74	88.816	Xiphophorus_couchianus