EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000039074 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3391 bases
Position: chrAPWO02000339.1:40178-43568
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052464	RVT_1	PF00078.27	6.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000035509	-	618	-	ENSAMXP00000052464	205 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000039074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000039074	-	67	85.507	ENSAMXG00000037304	-	73	85.507
ENSAMXG00000039074	-	76	70.886	ENSAMXG00000033175	-	88	70.886
ENSAMXG00000039074	-	67	79.710	ENSAMXG00000040335	-	80	79.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039074	-	54	40.541	ENSLACG00000002023	-	68	40.541	Latimeria_chalumnae
ENSAMXG00000039074	-	66	47.059	ENSSFOG00015000049	-	69	47.059	Scleropages_formosus