EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000039106 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1515 bases
Position: chrAPWO02000077.1:288781-290295
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029239	RVT_1	PF00078.27	9.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048928	-	1515	-	ENSAMXP00000029239	504 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000039106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000039106	-	72	31.328	ENSAMXG00000041465	-	54	31.328
ENSAMXG00000039106	-	53	31.227	ENSAMXG00000029182	-	77	30.132
ENSAMXG00000039106	-	94	30.452	ENSAMXG00000030761	-	63	30.452
ENSAMXG00000039106	-	72	59.140	ENSAMXG00000031032	-	99	59.140
ENSAMXG00000039106	-	57	33.548	ENSAMXG00000033197	-	51	31.034
ENSAMXG00000039106	-	94	30.604	ENSAMXG00000038480	-	68	30.799
ENSAMXG00000039106	-	69	37.079	ENSAMXG00000043469	-	77	36.517
ENSAMXG00000039106	-	94	30.648	ENSAMXG00000043631	-	58	30.799
ENSAMXG00000039106	-	93	49.476	ENSAMXG00000038502	-	97	49.476
ENSAMXG00000039106	-	75	33.159	ENSAMXG00000040471	-	59	33.159
ENSAMXG00000039106	-	65	32.069	ENSAMXG00000033786	-	59	32.069
ENSAMXG00000039106	-	73	33.088	ENSAMXG00000042777	-	54	33.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039106	-	67	37.391	ENSAPOG00000008925	-	87	38.907	Acanthochromis_polyacanthus
ENSAMXG00000039106	-	75	59.896	ENSAPEG00000005752	-	92	59.896	Amphiprion_percula
ENSAMXG00000039106	-	88	41.943	ENSAPEG00000014949	-	66	41.943	Amphiprion_percula
ENSAMXG00000039106	-	58	36.120	ENSACLG00000021935	-	92	36.120	Astatotilapia_calliptera
ENSAMXG00000039106	-	73	31.343	ENSACLG00000005847	-	51	32.454	Astatotilapia_calliptera
ENSAMXG00000039106	-	89	55.361	ENSACLG00000001380	-	78	55.361	Astatotilapia_calliptera
ENSAMXG00000039106	-	57	31.646	ENSACLG00000006798	-	90	33.803	Astatotilapia_calliptera
ENSAMXG00000039106	-	70	43.646	ENSACLG00000013847	-	83	43.646	Astatotilapia_calliptera
ENSAMXG00000039106	-	58	34.448	ENSACLG00000006549	-	82	34.448	Astatotilapia_calliptera
ENSAMXG00000039106	-	74	31.731	ENSACLG00000005526	-	50	31.731	Astatotilapia_calliptera
ENSAMXG00000039106	-	60	38.782	ENSACLG00000010403	-	100	38.141	Astatotilapia_calliptera
ENSAMXG00000039106	-	88	30.172	ENSACLG00000014740	-	55	30.172	Astatotilapia_calliptera
ENSAMXG00000039106	-	65	43.675	ENSACLG00000013289	-	99	43.675	Astatotilapia_calliptera
ENSAMXG00000039106	-	75	30.491	ENSACLG00000020385	-	67	30.491	Astatotilapia_calliptera
ENSAMXG00000039106	-	74	30.000	ENSACLG00000012278	-	52	30.000	Astatotilapia_calliptera
ENSAMXG00000039106	-	60	50.649	ENSACLG00000007712	-	54	50.649	Astatotilapia_calliptera
ENSAMXG00000039106	-	83	62.061	ENSACLG00000009861	-	86	62.061	Astatotilapia_calliptera
ENSAMXG00000039106	-	52	36.803	ENSCPBG00000001687	-	89	36.803	Chrysemys_picta_bellii
ENSAMXG00000039106	-	84	36.574	ENSCPBG00000001119	-	93	36.574	Chrysemys_picta_bellii
ENSAMXG00000039106	-	77	34.257	ENSCPBG00000001369	-	70	34.257	Chrysemys_picta_bellii
ENSAMXG00000039106	-	89	33.987	ENSCVAG00000019870	-	61	33.551	Cyprinodon_variegatus
ENSAMXG00000039106	-	64	33.934	ENSGAGG00000007552	-	52	33.934	Gopherus_agassizii
ENSAMXG00000039106	-	64	36.474	ENSGAGG00000011063	-	68	36.474	Gopherus_agassizii
ENSAMXG00000039106	-	77	38.832	ENSGAGG00000002613	-	53	38.832	Gopherus_agassizii
ENSAMXG00000039106	-	88	34.858	ENSGAGG00000022002	-	54	34.423	Gopherus_agassizii
ENSAMXG00000039106	-	88	34.858	ENSGAGG00000007173	-	71	34.205	Gopherus_agassizii
ENSAMXG00000039106	-	77	35.264	ENSGAGG00000013650	-	70	35.264	Gopherus_agassizii
ENSAMXG00000039106	-	52	38.290	ENSGAGG00000022131	-	89	38.290	Gopherus_agassizii
ENSAMXG00000039106	-	58	35.117	ENSHBUG00000016445	-	56	35.117	Haplochromis_burtoni
ENSAMXG00000039106	-	71	53.022	ENSHBUG00000009088	-	100	53.022	Haplochromis_burtoni
ENSAMXG00000039106	-	68	38.000	ENSHCOG00000019997	-	63	38.000	Hippocampus_comes
ENSAMXG00000039106	-	87	34.222	ENSIPUG00000003645	-	91	33.778	Ictalurus_punctatus
ENSAMXG00000039106	-	89	55.044	ENSKMAG00000013568	-	58	55.044	Kryptolebias_marmoratus
ENSAMXG00000039106	-	81	54.458	ENSKMAG00000007574	-	81	54.458	Kryptolebias_marmoratus
ENSAMXG00000039106	-	52	31.186	ENSKMAG00000010799	-	83	31.186	Kryptolebias_marmoratus
ENSAMXG00000039106	-	75	37.726	ENSLBEG00000003912	-	81	40.836	Labrus_bergylta
ENSAMXG00000039106	-	68	34.493	ENSLACG00000002169	-	55	34.493	Latimeria_chalumnae
ENSAMXG00000039106	-	60	32.268	ENSLACG00000009347	-	50	32.268	Latimeria_chalumnae
ENSAMXG00000039106	-	61	35.625	ENSLACG00000003900	-	86	36.462	Latimeria_chalumnae
ENSAMXG00000039106	-	62	31.988	ENSLACG00000012109	-	56	31.988	Latimeria_chalumnae
ENSAMXG00000039106	-	75	34.190	ENSLACG00000009168	-	57	31.620	Latimeria_chalumnae
ENSAMXG00000039106	-	74	31.186	ENSLACG00000006151	-	51	31.186	Latimeria_chalumnae
ENSAMXG00000039106	-	59	33.770	ENSLACG00000001892	-	89	33.115	Latimeria_chalumnae
ENSAMXG00000039106	-	71	30.952	ENSLACG00000006413	-	54	30.952	Latimeria_chalumnae
ENSAMXG00000039106	-	50	30.418	ENSLACG00000002249	-	87	31.330	Latimeria_chalumnae
ENSAMXG00000039106	-	63	38.154	ENSLOCG00000017292	-	98	38.154	Lepisosteus_oculatus
ENSAMXG00000039106	-	80	31.494	ENSMAMG00000016004	-	64	31.494	Mastacembelus_armatus
ENSAMXG00000039106	-	84	35.862	ENSMAMG00000019918	-	71	35.240	Mastacembelus_armatus
ENSAMXG00000039106	-	74	31.490	ENSMZEG00005004899	-	52	31.490	Maylandia_zebra
ENSAMXG00000039106	-	75	33.506	ENSMZEG00005008378	-	53	33.506	Maylandia_zebra
ENSAMXG00000039106	-	83	62.529	ENSMZEG00005023829	-	86	62.529	Maylandia_zebra
ENSAMXG00000039106	-	77	33.097	ENSMZEG00005017878	-	64	33.097	Maylandia_zebra
ENSAMXG00000039106	-	55	39.146	ENSMALG00000005075	-	88	39.146	Monopterus_albus
ENSAMXG00000039106	-	53	44.161	ENSMALG00000020245	-	100	44.161	Monopterus_albus
ENSAMXG00000039106	-	53	41.392	ENSNBRG00000002791	-	90	41.392	Neolamprologus_brichardi
ENSAMXG00000039106	-	65	55.030	ENSNBRG00000002477	-	100	55.030	Neolamprologus_brichardi
ENSAMXG00000039106	-	51	30.189	ENSONIG00000018991	-	92	30.153	Oreochromis_niloticus
ENSAMXG00000039106	-	68	40.000	ENSORLG00000023794	-	65	40.000	Oryzias_latipes
ENSAMXG00000039106	-	69	34.521	ENSORLG00000022411	-	99	34.521	Oryzias_latipes
ENSAMXG00000039106	-	75	42.448	ENSORLG00000027869	-	84	42.448	Oryzias_latipes
ENSAMXG00000039106	-	68	43.678	ENSORLG00000027443	-	59	43.678	Oryzias_latipes
ENSAMXG00000039106	-	89	49.345	ENSORLG00000027231	-	87	49.345	Oryzias_latipes
ENSAMXG00000039106	-	71	37.772	ENSORLG00020016924	-	88	37.772	Oryzias_latipes_hni
ENSAMXG00000039106	-	84	34.318	ENSORLG00020000592	-	52	34.318	Oryzias_latipes_hni
ENSAMXG00000039106	-	66	50.298	ENSORLG00020000154	-	83	50.298	Oryzias_latipes_hni
ENSAMXG00000039106	-	54	31.119	ENSORLG00020002705	-	90	31.119	Oryzias_latipes_hni
ENSAMXG00000039106	-	76	49.235	ENSORLG00020012706	-	99	49.235	Oryzias_latipes_hni
ENSAMXG00000039106	-	60	50.658	ENSORLG00020016252	-	81	50.658	Oryzias_latipes_hni
ENSAMXG00000039106	-	63	35.404	ENSORLG00020021288	-	94	35.974	Oryzias_latipes_hni
ENSAMXG00000039106	-	89	46.827	ENSORLG00020002002	-	72	46.827	Oryzias_latipes_hni
ENSAMXG00000039106	-	83	35.446	ENSORLG00020009084	-	57	35.446	Oryzias_latipes_hni
ENSAMXG00000039106	-	73	32.626	ENSORLG00020016695	-	51	32.626	Oryzias_latipes_hni
ENSAMXG00000039106	-	85	46.119	ENSORLG00020009127	-	86	46.119	Oryzias_latipes_hni
ENSAMXG00000039106	-	88	48.238	ENSORLG00020019030	-	55	48.238	Oryzias_latipes_hni
ENSAMXG00000039106	-	66	43.620	ENSORLG00015009803	-	70	43.620	Oryzias_latipes_hsok
ENSAMXG00000039106	-	71	30.077	ENSORLG00015000379	-	51	30.077	Oryzias_latipes_hsok
ENSAMXG00000039106	-	89	46.827	ENSORLG00015022314	-	54	46.827	Oryzias_latipes_hsok
ENSAMXG00000039106	-	84	44.988	ENSORLG00015013369	-	56	44.988	Oryzias_latipes_hsok
ENSAMXG00000039106	-	71	55.096	ENSORLG00015021822	-	96	55.402	Oryzias_latipes_hsok
ENSAMXG00000039106	-	71	44.262	ENSORLG00015010510	-	59	44.262	Oryzias_latipes_hsok
ENSAMXG00000039106	-	75	38.802	ENSORLG00015008138	-	73	38.802	Oryzias_latipes_hsok
ENSAMXG00000039106	-	84	35.915	ENSOMEG00000013073	-	68	35.915	Oryzias_melastigma
ENSAMXG00000039106	-	86	34.081	ENSOMEG00000005634	-	60	33.632	Oryzias_melastigma
ENSAMXG00000039106	-	55	35.461	ENSOMEG00000007764	-	96	35.461	Oryzias_melastigma
ENSAMXG00000039106	-	68	52.571	ENSOMEG00000013437	-	60	52.571	Oryzias_melastigma
ENSAMXG00000039106	-	75	37.113	ENSPKIG00000005406	-	65	37.113	Paramormyrops_kingsleyae
ENSAMXG00000039106	-	79	31.106	ENSPKIG00000012990	-	62	31.106	Paramormyrops_kingsleyae
ENSAMXG00000039106	-	75	35.897	ENSPKIG00000015048	-	56	35.641	Paramormyrops_kingsleyae
ENSAMXG00000039106	-	74	38.860	ENSPKIG00000013778	-	52	38.760	Paramormyrops_kingsleyae
ENSAMXG00000039106	-	57	34.056	ENSPKIG00000003982	-	63	34.056	Paramormyrops_kingsleyae
ENSAMXG00000039106	-	54	37.545	ENSPKIG00000019619	-	99	37.545	Paramormyrops_kingsleyae
ENSAMXG00000039106	-	80	68.370	ENSPKIG00000007140	-	94	68.370	Paramormyrops_kingsleyae
ENSAMXG00000039106	-	76	33.676	ENSPSIG00000001614	-	56	33.676	Pelodiscus_sinensis
ENSAMXG00000039106	-	77	37.405	ENSPSIG00000001197	-	97	37.405	Pelodiscus_sinensis
ENSAMXG00000039106	-	66	35.277	ENSPSIG00000001249	-	99	35.277	Pelodiscus_sinensis
ENSAMXG00000039106	-	75	33.333	ENSPSIG00000000226	-	79	33.255	Pelodiscus_sinensis
ENSAMXG00000039106	-	64	33.433	ENSPSIG00000002033	-	100	32.836	Pelodiscus_sinensis
ENSAMXG00000039106	-	63	35.168	ENSPSIG00000000367	-	75	35.168	Pelodiscus_sinensis
ENSAMXG00000039106	-	77	35.279	ENSPSIG00000000193	-	78	35.279	Pelodiscus_sinensis
ENSAMXG00000039106	-	76	36.132	ENSPSIG00000001757	-	96	36.132	Pelodiscus_sinensis
ENSAMXG00000039106	-	66	37.870	ENSPSIG00000001800	-	75	37.870	Pelodiscus_sinensis
ENSAMXG00000039106	-	55	37.722	ENSPSIG00000000007	-	71	37.722	Pelodiscus_sinensis
ENSAMXG00000039106	-	76	35.714	ENSPSIG00000001205	-	84	35.714	Pelodiscus_sinensis
ENSAMXG00000039106	-	61	36.538	ENSPSIG00000014032	-	85	37.631	Pelodiscus_sinensis
ENSAMXG00000039106	-	51	35.714	ENSPSIG00000001816	-	94	36.653	Pelodiscus_sinensis
ENSAMXG00000039106	-	77	35.606	ENSPSIG00000001150	-	53	35.606	Pelodiscus_sinensis
ENSAMXG00000039106	-	75	49.223	ENSPMEG00000018862	-	78	49.223	Poecilia_mexicana
ENSAMXG00000039106	-	66	32.754	ENSPMEG00000019465	-	76	32.174	Poecilia_mexicana
ENSAMXG00000039106	-	72	32.199	ENSPREG00000006496	-	53	32.199	Poecilia_reticulata
ENSAMXG00000039106	-	62	46.855	ENSPREG00000022349	-	69	46.855	Poecilia_reticulata
ENSAMXG00000039106	-	57	53.401	ENSPNYG00000004598	-	99	53.401	Pundamilia_nyererei
ENSAMXG00000039106	-	72	46.883	ENSPNAG00000015949	-	94	47.354	Pygocentrus_nattereri
ENSAMXG00000039106	-	84	35.104	ENSPNAG00000009058	-	86	34.642	Pygocentrus_nattereri
ENSAMXG00000039106	-	89	34.423	ENSPNAG00000010299	-	89	34.423	Pygocentrus_nattereri
ENSAMXG00000039106	-	68	31.921	ENSSFOG00015016168	-	79	31.356	Scleropages_formosus
ENSAMXG00000039106	-	76	33.488	ENSSFOG00015024061	-	69	33.488	Scleropages_formosus
ENSAMXG00000039106	-	61	60.828	ENSSPAG00000008169	-	51	60.828	Stegastes_partitus
ENSAMXG00000039106	-	65	36.637	ENSTRUG00000024803	-	64	36.637	Takifugu_rubripes
ENSAMXG00000039106	-	75	50.904	ENSXMAG00000025957	-	68	50.904	Xiphophorus_maculatus
ENSAMXG00000039106	-	57	31.646	ENSXMAG00000027711	-	94	31.646	Xiphophorus_maculatus
ENSAMXG00000039106	-	73	36.675	ENSXMAG00000023507	-	73	36.675	Xiphophorus_maculatus