EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000039232 (Gene tree)
Gene ID: 103035136
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 44
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 16518 bases
Position: chr19:17860007-17876524
Accession: 103035136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032262	RRM_1	PF00076.22	1.3e-06	1	1
ENSAMXP00000049010	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000036746	-	7438	-	ENSAMXP00000049010	1011 (aa)	-	UPI000BBDC451
ENSAMXT00000045920	-	7438	XM_007253526	ENSAMXP00000032262	1011 (aa)	XP_007253588	UPI000BBDC451

Gene Model

Click here to download ENSAMXG00000039232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039232	-	94	33.060	ENSACLG00000021694	-	92	33.060	Astatotilapia_calliptera
ENSAMXG00000039232	-	50	31.731	ENSGAFG00000017115	-	67	31.721	Gambusia_affinis
ENSAMXG00000039232	-	83	30.093	ENSHBUG00000007243	-	55	63.889	Haplochromis_burtoni
ENSAMXG00000039232	-	99	47.152	ENSIPUG00000021990	-	99	47.152	Ictalurus_punctatus
ENSAMXG00000039232	-	81	31.034	ENSLBEG00000023057	-	99	31.124	Labrus_bergylta
ENSAMXG00000039232	-	57	51.429	ENSPREG00000017700	-	63	51.429	Poecilia_reticulata
ENSAMXG00000039232	-	99	56.350	ENSPNAG00000015981	-	99	56.362	Pygocentrus_nattereri
ENSAMXG00000039232	-	94	31.244	ENSSDUG00000015966	-	93	31.244	Seriola_dumerili
ENSAMXG00000039232	-	59	46.739	ENSXMAG00000029311	-	61	46.739	Xiphophorus_maculatus