EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000039266 (Gene tree)
Gene ID: -
Gene Symbol: gpkow
Alias: mp:zf637-1-001655|si:dz150f13.5|t54l|wu:fb38d03|zf637-1-001655|zgc:152714
Full Name: G patch domain and KOW motifs
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6396 bases
Position: chr6:39835528-39841923
Accession: ZDB-GENE-030616-159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043880	KOW	PF00467.29	1.8e-05	1	1
ENSAMXP00000043880	G-patch	PF01585.23	7.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055255	-	924	-	ENSAMXP00000043880	307 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000039266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039266	gpkow	87	42.857	ENSG00000068394	GPKOW	61	42.857	Homo_sapiens
ENSAMXG00000039266	gpkow	89	60.726	ENSAPOG00000004970	gpkow	59	60.726	Acanthochromis_polyacanthus
ENSAMXG00000039266	gpkow	87	44.444	ENSAMEG00000012303	GPKOW	60	44.444	Ailuropoda_melanoleuca
ENSAMXG00000039266	gpkow	89	62.092	ENSACIG00000010755	gpkow	59	62.092	Amphilophus_citrinellus
ENSAMXG00000039266	gpkow	89	59.736	ENSAOCG00000022818	gpkow	58	59.736	Amphiprion_ocellaris
ENSAMXG00000039266	gpkow	89	59.736	ENSAPEG00000021416	gpkow	60	59.736	Amphiprion_percula
ENSAMXG00000039266	gpkow	91	60.450	ENSATEG00000023744	gpkow	60	60.450	Anabas_testudineus
ENSAMXG00000039266	gpkow	86	53.156	ENSACAG00000016598	GPKOW	58	53.156	Anolis_carolinensis
ENSAMXG00000039266	gpkow	87	44.000	ENSANAG00000030473	-	61	44.000	Aotus_nancymaae
ENSAMXG00000039266	gpkow	64	44.843	ENSANAG00000036571	-	52	46.226	Aotus_nancymaae
ENSAMXG00000039266	gpkow	87	38.333	ENSANAG00000033498	-	60	38.333	Aotus_nancymaae
ENSAMXG00000039266	gpkow	85	42.857	ENSBTAG00000002568	GPKOW	59	42.857	Bos_taurus
ENSAMXG00000039266	gpkow	87	42.333	ENSCJAG00000002656	GPKOW	61	43.667	Callithrix_jacchus
ENSAMXG00000039266	gpkow	87	44.186	ENSCAFG00000015794	GPKOW	60	44.186	Canis_familiaris
ENSAMXG00000039266	gpkow	87	44.186	ENSCAFG00020020258	GPKOW	60	44.186	Canis_lupus_dingo
ENSAMXG00000039266	gpkow	85	44.291	ENSCHIG00000013277	GPKOW	60	42.955	Capra_hircus
ENSAMXG00000039266	gpkow	87	44.186	ENSTSYG00000033182	-	61	44.186	Carlito_syrichta
ENSAMXG00000039266	gpkow	86	38.870	ENSTSYG00000029374	-	61	38.870	Carlito_syrichta
ENSAMXG00000039266	gpkow	57	48.020	ENSCAPG00000011329	GPKOW	52	48.020	Cavia_aperea
ENSAMXG00000039266	gpkow	85	43.051	ENSCPOG00000013270	GPKOW	59	43.051	Cavia_porcellus
ENSAMXG00000039266	gpkow	87	44.147	ENSCCAG00000034660	-	62	44.147	Cebus_capucinus
ENSAMXG00000039266	gpkow	93	39.117	ENSCCAG00000022161	-	65	39.117	Cebus_capucinus
ENSAMXG00000039266	gpkow	93	41.509	ENSCATG00000041433	GPKOW	64	41.509	Cercocebus_atys
ENSAMXG00000039266	gpkow	86	39.535	ENSCLAG00000007117	-	57	39.535	Chinchilla_lanigera
ENSAMXG00000039266	gpkow	85	42.953	ENSCLAG00000002220	-	59	42.953	Chinchilla_lanigera
ENSAMXG00000039266	gpkow	93	42.056	ENSCSAG00000012926	GPKOW	64	42.056	Chlorocebus_sabaeus
ENSAMXG00000039266	gpkow	86	54.209	ENSCPBG00000016609	GPKOW	57	54.209	Chrysemys_picta_bellii
ENSAMXG00000039266	gpkow	86	39.100	ENSCING00000020813	-	77	39.100	Ciona_intestinalis
ENSAMXG00000039266	gpkow	93	41.195	ENSCANG00000037595	GPKOW	64	41.195	Colobus_angolensis_palliatus
ENSAMXG00000039266	gpkow	91	42.208	ENSCGRG00001016210	Gpkow	61	42.208	Cricetulus_griseus_chok1gshd
ENSAMXG00000039266	gpkow	91	42.208	ENSCGRG00000013835	Gpkow	61	42.208	Cricetulus_griseus_crigri
ENSAMXG00000039266	gpkow	90	60.526	ENSCSEG00000020569	gpkow	60	60.526	Cynoglossus_semilaevis
ENSAMXG00000039266	gpkow	92	59.236	ENSCVAG00000017066	gpkow	62	59.236	Cyprinodon_variegatus
ENSAMXG00000039266	gpkow	95	67.619	ENSDARG00000029612	gpkow	62	67.619	Danio_rerio
ENSAMXG00000039266	gpkow	87	43.750	ENSDNOG00000016647	GPKOW	60	43.750	Dasypus_novemcinctus
ENSAMXG00000039266	gpkow	87	39.604	ENSDORG00000013663	Gpkow	60	39.604	Dipodomys_ordii
ENSAMXG00000039266	gpkow	86	45.395	ENSEBUG00000001912	gpkow	68	45.395	Eptatretus_burgeri
ENSAMXG00000039266	gpkow	87	40.066	ENSEASG00005019852	GPKOW	58	40.066	Equus_asinus_asinus
ENSAMXG00000039266	gpkow	87	43.333	ENSECAG00000018251	GPKOW	60	43.333	Equus_caballus
ENSAMXG00000039266	gpkow	86	44.108	ENSEEUG00000008839	GPKOW	60	44.108	Erinaceus_europaeus
ENSAMXG00000039266	gpkow	95	61.934	ENSELUG00000022223	gpkow	63	61.934	Esox_lucius
ENSAMXG00000039266	gpkow	86	43.144	ENSFCAG00000003818	GPKOW	61	43.144	Felis_catus
ENSAMXG00000039266	gpkow	85	43.243	ENSFDAG00000001669	GPKOW	59	43.243	Fukomys_damarensis
ENSAMXG00000039266	gpkow	95	57.453	ENSFHEG00000022349	gpkow	61	57.453	Fundulus_heteroclitus
ENSAMXG00000039266	gpkow	92	60.323	ENSGMOG00000019661	gpkow	68	60.323	Gadus_morhua
ENSAMXG00000039266	gpkow	91	58.252	ENSGACG00000012127	gpkow	91	59.801	Gasterosteus_aculeatus
ENSAMXG00000039266	gpkow	76	46.718	ENSGAGG00000006302	GPKOW	59	46.718	Gopherus_agassizii
ENSAMXG00000039266	gpkow	93	41.509	ENSGGOG00000013685	GPKOW	67	40.881	Gorilla_gorilla
ENSAMXG00000039266	gpkow	89	61.589	ENSHBUG00000010655	gpkow	54	61.589	Haplochromis_burtoni
ENSAMXG00000039266	gpkow	85	43.390	ENSHGLG00000002746	GPKOW	59	43.390	Heterocephalus_glaber_female
ENSAMXG00000039266	gpkow	85	44.068	ENSHGLG00100014283	GPKOW	59	44.068	Heterocephalus_glaber_male
ENSAMXG00000039266	gpkow	95	67.619	ENSIPUG00000008342	gpkow	60	67.619	Ictalurus_punctatus
ENSAMXG00000039266	gpkow	91	43.590	ENSSTOG00000014593	GPKOW	62	43.590	Ictidomys_tridecemlineatus
ENSAMXG00000039266	gpkow	84	43.345	ENSJJAG00000013397	Gpkow	57	43.345	Jaculus_jaculus
ENSAMXG00000039266	gpkow	89	62.252	ENSKMAG00000006241	gpkow	59	62.252	Kryptolebias_marmoratus
ENSAMXG00000039266	gpkow	89	60.726	ENSLBEG00000013238	gpkow	59	60.726	Labrus_bergylta
ENSAMXG00000039266	gpkow	95	59.878	ENSLOCG00000014776	gpkow	62	59.878	Lepisosteus_oculatus
ENSAMXG00000039266	gpkow	87	44.186	ENSLAFG00000005896	GPKOW	60	44.186	Loxodonta_africana
ENSAMXG00000039266	gpkow	93	41.824	ENSMFAG00000035346	GPKOW	64	41.824	Macaca_fascicularis
ENSAMXG00000039266	gpkow	93	41.824	ENSMMUG00000020557	GPKOW	62	41.824	Macaca_mulatta
ENSAMXG00000039266	gpkow	93	41.824	ENSMNEG00000004803	GPKOW	64	41.824	Macaca_nemestrina
ENSAMXG00000039266	gpkow	93	41.509	ENSMLEG00000033293	GPKOW	64	41.509	Mandrillus_leucophaeus
ENSAMXG00000039266	gpkow	88	63.000	ENSMAMG00000024235	gpkow	59	63.000	Mastacembelus_armatus
ENSAMXG00000039266	gpkow	89	61.258	ENSMZEG00005026357	gpkow	54	61.258	Maylandia_zebra
ENSAMXG00000039266	gpkow	87	44.333	ENSMICG00000045083	GPKOW	61	44.333	Microcebus_murinus
ENSAMXG00000039266	gpkow	85	41.892	ENSMOCG00000019251	Gpkow	59	41.892	Microtus_ochrogaster
ENSAMXG00000039266	gpkow	90	40.065	ENSMODG00000023705	-	63	40.391	Monodelphis_domestica
ENSAMXG00000039266	gpkow	78	42.802	ENSMODG00000011443	-	60	43.580	Monodelphis_domestica
ENSAMXG00000039266	gpkow	95	52.795	ENSMALG00000015148	gpkow	62	52.923	Monopterus_albus
ENSAMXG00000039266	gpkow	86	42.525	MGP_CAROLIEiJ_G0032893	Gpkow	63	42.525	Mus_caroli
ENSAMXG00000039266	gpkow	84	42.568	ENSMUSG00000031148	Gpkow	59	42.617	Mus_musculus
ENSAMXG00000039266	gpkow	83	43.345	MGP_PahariEiJ_G0031441	Gpkow	58	43.581	Mus_pahari
ENSAMXG00000039266	gpkow	87	43.960	ENSMPUG00000013808	GPKOW	60	43.960	Mustela_putorius_furo
ENSAMXG00000039266	gpkow	87	39.542	ENSMLUG00000009281	-	93	39.542	Myotis_lucifugus
ENSAMXG00000039266	gpkow	87	40.199	ENSNGAG00000005382	Gpkow	60	40.864	Nannospalax_galili
ENSAMXG00000039266	gpkow	89	61.258	ENSNBRG00000008941	gpkow	61	61.258	Neolamprologus_brichardi
ENSAMXG00000039266	gpkow	93	41.195	ENSNLEG00000007998	GPKOW	63	41.195	Nomascus_leucogenys
ENSAMXG00000039266	gpkow	89	61.258	ENSONIG00000016834	gpkow	54	61.258	Oreochromis_niloticus
ENSAMXG00000039266	gpkow	87	38.907	ENSOCUG00000010422	GPKOW	61	38.907	Oryctolagus_cuniculus
ENSAMXG00000039266	gpkow	92	58.466	ENSORLG00000014442	gpkow	61	58.786	Oryzias_latipes
ENSAMXG00000039266	gpkow	95	57.764	ENSORLG00020012795	gpkow	61	58.786	Oryzias_latipes_hni
ENSAMXG00000039266	gpkow	92	58.466	ENSORLG00015006852	gpkow	61	58.786	Oryzias_latipes_hsok
ENSAMXG00000039266	gpkow	92	60.703	ENSOMEG00000003236	gpkow	66	60.703	Oryzias_melastigma
ENSAMXG00000039266	gpkow	87	37.377	ENSOGAG00000003644	GPKOW	61	37.377	Otolemur_garnettii
ENSAMXG00000039266	gpkow	85	44.291	ENSOARG00000010927	GPKOW	58	44.291	Ovis_aries
ENSAMXG00000039266	gpkow	93	41.745	ENSPPAG00000040116	GPKOW	64	41.745	Pan_paniscus
ENSAMXG00000039266	gpkow	86	42.475	ENSPPRG00000016972	GPKOW	61	42.475	Panthera_pardus
ENSAMXG00000039266	gpkow	87	42.667	ENSPTIG00000008398	GPKOW	60	42.667	Panthera_tigris_altaica
ENSAMXG00000039266	gpkow	93	41.509	ENSPTRG00000047603	GPKOW	64	41.509	Pan_troglodytes
ENSAMXG00000039266	gpkow	93	41.509	ENSPANG00000013477	GPKOW	64	41.509	Papio_anubis
ENSAMXG00000039266	gpkow	88	62.458	ENSPKIG00000008382	gpkow	59	62.458	Paramormyrops_kingsleyae
ENSAMXG00000039266	gpkow	89	57.756	ENSPMGG00000010880	gpkow	59	57.756	Periophthalmus_magnuspinnatus
ENSAMXG00000039266	gpkow	99	39.080	ENSPEMG00000009966	Gpkow	66	39.080	Peromyscus_maniculatus_bairdii
ENSAMXG00000039266	gpkow	89	50.645	ENSPMAG00000003497	gpkow	58	50.645	Petromyzon_marinus
ENSAMXG00000039266	gpkow	91	60.129	ENSPFOG00000003065	gpkow	59	60.129	Poecilia_formosa
ENSAMXG00000039266	gpkow	91	60.129	ENSPLAG00000023097	gpkow	59	60.129	Poecilia_latipinna
ENSAMXG00000039266	gpkow	91	60.450	ENSPMEG00000002762	gpkow	59	60.450	Poecilia_mexicana
ENSAMXG00000039266	gpkow	92	42.089	ENSPPYG00000020334	-	80	42.089	Pongo_abelii
ENSAMXG00000039266	gpkow	86	44.147	ENSPCOG00000008505	GPKOW	61	44.147	Propithecus_coquereli
ENSAMXG00000039266	gpkow	88	61.538	ENSPNYG00000014523	gpkow	58	61.538	Pundamilia_nyererei
ENSAMXG00000039266	gpkow	95	73.968	ENSPNAG00000008360	gpkow	60	73.968	Pygocentrus_nattereri
ENSAMXG00000039266	gpkow	84	41.216	ENSRNOG00000022939	Gpkow	59	41.137	Rattus_norvegicus
ENSAMXG00000039266	gpkow	81	44.526	ENSRBIG00000027885	GPKOW	59	44.526	Rhinopithecus_bieti
ENSAMXG00000039266	gpkow	93	40.881	ENSRROG00000037604	GPKOW	64	40.881	Rhinopithecus_roxellana
ENSAMXG00000039266	gpkow	87	44.147	ENSSBOG00000032042	-	61	44.147	Saimiri_boliviensis_boliviensis
ENSAMXG00000039266	gpkow	82	42.105	ENSSBOG00000024861	-	61	42.105	Saimiri_boliviensis_boliviensis
ENSAMXG00000039266	gpkow	95	64.024	ENSSFOG00015009901	gpkow	62	64.024	Scleropages_formosus
ENSAMXG00000039266	gpkow	92	56.962	ENSSMAG00000013323	gpkow	61	56.962	Scophthalmus_maximus
ENSAMXG00000039266	gpkow	89	62.706	ENSSDUG00000023134	gpkow	59	62.706	Seriola_dumerili
ENSAMXG00000039266	gpkow	89	62.706	ENSSLDG00000024756	gpkow	59	62.706	Seriola_lalandi_dorsalis
ENSAMXG00000039266	gpkow	73	43.825	ENSSARG00000003351	GPKOW	59	43.825	Sorex_araneus
ENSAMXG00000039266	gpkow	88	60.333	ENSSPAG00000015503	gpkow	60	60.333	Stegastes_partitus
ENSAMXG00000039266	gpkow	87	43.478	ENSSSCG00000012291	GPKOW	60	43.478	Sus_scrofa
ENSAMXG00000039266	gpkow	88	54.426	ENSTRUG00000000616	gpkow	58	54.426	Takifugu_rubripes
ENSAMXG00000039266	gpkow	88	55.960	ENSTNIG00000012502	gpkow	61	55.960	Tetraodon_nigroviridis
ENSAMXG00000039266	gpkow	87	41.356	ENSTTRG00000008579	GPKOW	61	41.356	Tursiops_truncatus
ENSAMXG00000039266	gpkow	87	43.934	ENSUAMG00000026502	GPKOW	67	43.934	Ursus_americanus
ENSAMXG00000039266	gpkow	80	44.404	ENSUMAG00000007072	GPKOW	52	44.404	Ursus_maritimus
ENSAMXG00000039266	gpkow	87	44.186	ENSVVUG00000017815	GPKOW	60	44.186	Vulpes_vulpes
ENSAMXG00000039266	gpkow	89	50.993	ENSXETG00000007727	gpkow	61	50.993	Xenopus_tropicalis
ENSAMXG00000039266	gpkow	90	61.462	ENSXCOG00000014306	gpkow	61	60.256	Xiphophorus_couchianus
ENSAMXG00000039266	gpkow	91	60.984	ENSXMAG00000018216	gpkow	58	60.984	Xiphophorus_maculatus