EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000039278 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4925 bases
Position: chr22:18379390-18384314
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048939	RRM_1	PF00076.22	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047453	-	2776	-	ENSAMXP00000048939	135 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000039278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039278	-	100	94.074	ENSACIG00000018944	-	100	94.074	Amphilophus_citrinellus
ENSAMXG00000039278	-	100	83.704	ENSACIG00000003350	-	100	83.704	Amphilophus_citrinellus
ENSAMXG00000039278	-	100	94.815	ENSAOCG00000008063	-	100	94.815	Amphiprion_ocellaris
ENSAMXG00000039278	-	79	93.458	ENSAPEG00000018706	-	70	93.458	Amphiprion_percula
ENSAMXG00000039278	-	73	54.545	ENSCING00000004036	-	52	54.545	Ciona_intestinalis
ENSAMXG00000039278	-	100	94.074	ENSCSEG00000001951	-	100	94.074	Cynoglossus_semilaevis
ENSAMXG00000039278	-	100	83.704	ENSDARG00000074245	spen	100	83.704	Danio_rerio
ENSAMXG00000039278	-	100	93.333	ENSIPUG00000017814	-	100	93.333	Ictalurus_punctatus
ENSAMXG00000039278	-	100	85.185	ENSMZEG00005021487	-	100	85.185	Maylandia_zebra
ENSAMXG00000039278	-	100	88.889	ENSMALG00000018833	-	100	88.889	Monopterus_albus
ENSAMXG00000039278	-	100	85.185	ENSNBRG00000022102	-	100	85.185	Neolamprologus_brichardi
ENSAMXG00000039278	-	100	83.704	ENSPMGG00000006296	-	100	83.704	Periophthalmus_magnuspinnatus
ENSAMXG00000039278	-	100	94.074	ENSPMGG00000003643	-	100	94.074	Periophthalmus_magnuspinnatus
ENSAMXG00000039278	-	100	82.963	ENSSFOG00015007147	-	100	82.963	Scleropages_formosus
ENSAMXG00000039278	-	100	74.815	ENSSPUG00000001856	-	100	74.815	Sphenodon_punctatus
ENSAMXG00000039278	-	100	93.333	ENSTRUG00000023711	-	100	93.333	Takifugu_rubripes