EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000039432 (Gene tree)
Gene ID: 111188428
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1185 bases
Position: chrAPWO02001109.1:58334-59518
Accession: 111188428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	1	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	2	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	3	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	4	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	5	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	6	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	7	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	8	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	9	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	10	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	11	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	12	13
ENSAMXP00000020409	zf-C2H2	PF00096.26	1.6e-78	13	13
ENSAMXP00000020409	zf-met	PF12874.7	2.4e-15	1	2
ENSAMXP00000020409	zf-met	PF12874.7	2.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020409	-	1185	XM_022662110	ENSAMXP00000020409	394 (aa)	XP_022517831	W5LKP7

Gene Model

Click here to download ENSAMXG00000039432's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000039432	-	98	63.636	ENSAMXG00000030963	-	64	63.636
ENSAMXG00000039432	-	99	63.905	ENSAMXG00000001626	-	99	63.905
ENSAMXG00000039432	-	93	38.647	ENSAMXG00000039622	zbtb41	53	38.647
ENSAMXG00000039432	-	99	39.773	ENSAMXG00000038507	-	75	39.773
ENSAMXG00000039432	-	100	61.301	ENSAMXG00000036241	-	89	61.562
ENSAMXG00000039432	-	99	65.064	ENSAMXG00000031496	-	91	65.064
ENSAMXG00000039432	-	95	57.609	ENSAMXG00000012873	-	96	58.369
ENSAMXG00000039432	-	94	75.000	ENSAMXG00000043302	-	74	75.000
ENSAMXG00000039432	-	93	72.554	ENSAMXG00000007092	-	97	72.554
ENSAMXG00000039432	-	95	58.871	ENSAMXG00000010805	-	95	58.871
ENSAMXG00000039432	-	94	60.959	ENSAMXG00000037709	-	82	60.959
ENSAMXG00000039432	-	97	73.305	ENSAMXG00000037703	-	87	73.305
ENSAMXG00000039432	-	97	65.416	ENSAMXG00000030742	-	98	65.416
ENSAMXG00000039432	-	95	68.280	ENSAMXG00000039016	-	79	68.280
ENSAMXG00000039432	-	94	52.564	ENSAMXG00000034857	-	75	51.226
ENSAMXG00000039432	-	94	47.312	ENSAMXG00000032845	-	56	47.312
ENSAMXG00000039432	-	93	74.205	ENSAMXG00000041975	-	81	74.205
ENSAMXG00000039432	-	95	57.260	ENSAMXG00000042174	-	92	57.260
ENSAMXG00000039432	-	93	74.728	ENSAMXG00000037885	-	96	74.728
ENSAMXG00000039432	-	95	64.875	ENSAMXG00000037143	-	94	64.875
ENSAMXG00000039432	-	98	65.789	ENSAMXG00000037923	-	99	65.789
ENSAMXG00000039432	-	93	74.138	ENSAMXG00000031501	-	88	74.138
ENSAMXG00000039432	-	94	54.430	ENSAMXG00000038122	-	94	54.430
ENSAMXG00000039432	-	100	72.103	ENSAMXG00000039977	-	95	68.085
ENSAMXG00000039432	-	95	40.541	ENSAMXG00000038085	scrt1a	52	40.541
ENSAMXG00000039432	-	94	64.706	ENSAMXG00000041650	-	85	64.706
ENSAMXG00000039432	-	95	71.067	ENSAMXG00000041865	-	98	71.067
ENSAMXG00000039432	-	93	57.576	ENSAMXG00000012604	-	96	57.682
ENSAMXG00000039432	-	99	64.821	ENSAMXG00000042633	-	97	64.821
ENSAMXG00000039432	-	99	59.677	ENSAMXG00000038325	-	92	59.677
ENSAMXG00000039432	-	93	67.667	ENSAMXG00000038324	-	75	67.667
ENSAMXG00000039432	-	92	71.212	ENSAMXG00000035949	-	74	71.212
ENSAMXG00000039432	-	93	70.492	ENSAMXG00000008613	-	96	70.492
ENSAMXG00000039432	-	93	50.000	ENSAMXG00000015228	-	51	50.000
ENSAMXG00000039432	-	93	52.332	ENSAMXG00000029660	-	53	52.332
ENSAMXG00000039432	-	97	42.135	ENSAMXG00000033299	-	68	43.333
ENSAMXG00000039432	-	92	40.654	ENSAMXG00000029059	-	63	40.654
ENSAMXG00000039432	-	100	68.440	ENSAMXG00000041609	-	99	68.440
ENSAMXG00000039432	-	93	60.156	ENSAMXG00000036257	-	90	60.156
ENSAMXG00000039432	-	95	57.308	ENSAMXG00000034096	-	88	57.308
ENSAMXG00000039432	-	97	59.777	ENSAMXG00000032237	-	96	59.859
ENSAMXG00000039432	-	93	67.333	ENSAMXG00000031489	-	91	67.302
ENSAMXG00000039432	-	92	64.646	ENSAMXG00000036633	-	66	62.097
ENSAMXG00000039432	-	94	61.044	ENSAMXG00000044107	-	88	61.044
ENSAMXG00000039432	-	99	55.584	ENSAMXG00000026144	-	95	55.584
ENSAMXG00000039432	-	96	41.398	ENSAMXG00000025761	-	94	41.398
ENSAMXG00000039432	-	93	73.184	ENSAMXG00000035920	-	87	73.184
ENSAMXG00000039432	-	100	60.051	ENSAMXG00000037717	-	97	60.051
ENSAMXG00000039432	-	94	66.754	ENSAMXG00000039004	-	88	66.753
ENSAMXG00000039432	-	100	84.222	ENSAMXG00000031794	-	99	84.733
ENSAMXG00000039432	-	99	69.841	ENSAMXG00000025452	-	100	69.841
ENSAMXG00000039432	-	93	74.203	ENSAMXG00000025455	-	99	74.203
ENSAMXG00000039432	-	94	74.731	ENSAMXG00000025965	-	94	74.731
ENSAMXG00000039432	-	99	70.950	ENSAMXG00000034958	-	96	70.950
ENSAMXG00000039432	-	93	72.877	ENSAMXG00000031900	-	91	72.877
ENSAMXG00000039432	-	99	53.000	ENSAMXG00000043178	-	81	53.000
ENSAMXG00000039432	-	93	71.667	ENSAMXG00000038636	-	98	71.667
ENSAMXG00000039432	-	98	58.800	ENSAMXG00000038905	-	92	58.800
ENSAMXG00000039432	-	99	61.842	ENSAMXG00000039700	-	96	61.842
ENSAMXG00000039432	-	100	74.576	ENSAMXG00000040212	-	91	74.576
ENSAMXG00000039432	-	88	37.692	ENSAMXG00000002273	patz1	57	30.841
ENSAMXG00000039432	-	95	39.189	ENSAMXG00000042624	SCRT1	57	39.189
ENSAMXG00000039432	-	97	50.299	ENSAMXG00000014745	-	82	50.299
ENSAMXG00000039432	-	100	68.966	ENSAMXG00000042275	-	96	68.966
ENSAMXG00000039432	-	98	60.606	ENSAMXG00000026142	-	92	60.606
ENSAMXG00000039432	-	99	55.588	ENSAMXG00000026143	-	98	57.031
ENSAMXG00000039432	-	93	53.608	ENSAMXG00000035286	si:ch1073-224n8.1	83	53.608
ENSAMXG00000039432	-	99	64.706	ENSAMXG00000031844	-	98	64.539
ENSAMXG00000039432	-	93	57.377	ENSAMXG00000038284	-	95	57.377
ENSAMXG00000039432	-	93	59.910	ENSAMXG00000038280	-	86	59.910
ENSAMXG00000039432	-	94	63.761	ENSAMXG00000033013	-	84	63.761
ENSAMXG00000039432	-	93	46.237	ENSAMXG00000037382	-	91	40.952
ENSAMXG00000039432	-	98	57.692	ENSAMXG00000029783	-	96	57.509
ENSAMXG00000039432	-	99	59.884	ENSAMXG00000031307	-	74	59.884
ENSAMXG00000039432	-	95	64.208	ENSAMXG00000040630	-	99	65.301
ENSAMXG00000039432	-	93	73.786	ENSAMXG00000004610	-	96	73.786
ENSAMXG00000039432	-	100	64.069	ENSAMXG00000032841	-	90	64.069
ENSAMXG00000039432	-	95	71.429	ENSAMXG00000041725	-	88	71.429
ENSAMXG00000039432	-	99	70.303	ENSAMXG00000041721	-	76	70.303
ENSAMXG00000039432	-	99	48.905	ENSAMXG00000034934	-	85	48.905
ENSAMXG00000039432	-	92	40.972	ENSAMXG00000034873	-	88	40.972
ENSAMXG00000039432	-	93	52.632	ENSAMXG00000033252	-	97	50.000
ENSAMXG00000039432	-	96	72.483	ENSAMXG00000011804	-	87	72.483
ENSAMXG00000039432	-	97	55.236	ENSAMXG00000038536	-	83	55.381
ENSAMXG00000039432	-	97	71.034	ENSAMXG00000029828	-	96	71.034
ENSAMXG00000039432	-	99	45.833	ENSAMXG00000044096	-	91	45.833
ENSAMXG00000039432	-	95	73.297	ENSAMXG00000036762	-	96	73.297
ENSAMXG00000039432	-	94	68.598	ENSAMXG00000038453	-	82	68.598
ENSAMXG00000039432	-	95	34.722	ENSAMXG00000005882	znf131	57	30.088
ENSAMXG00000039432	-	95	66.667	ENSAMXG00000037326	-	94	66.667
ENSAMXG00000039432	-	94	42.857	ENSAMXG00000006669	GFI1	56	42.857
ENSAMXG00000039432	-	93	73.228	ENSAMXG00000042774	-	93	69.427
ENSAMXG00000039432	-	100	63.799	ENSAMXG00000042593	-	99	63.799
ENSAMXG00000039432	-	95	36.842	ENSAMXG00000035525	znf646	89	36.842
ENSAMXG00000039432	-	98	63.821	ENSAMXG00000037981	-	79	63.821
ENSAMXG00000039432	-	95	73.925	ENSAMXG00000029178	-	96	73.925
ENSAMXG00000039432	-	93	72.180	ENSAMXG00000035145	-	63	72.180
ENSAMXG00000039432	-	99	63.248	ENSAMXG00000009563	-	99	63.978
ENSAMXG00000039432	-	90	70.904	ENSAMXG00000033500	-	94	70.904
ENSAMXG00000039432	-	93	40.323	ENSAMXG00000024907	znf319b	87	37.310
ENSAMXG00000039432	-	95	72.269	ENSAMXG00000031009	-	91	72.269
ENSAMXG00000039432	-	99	64.706	ENSAMXG00000035437	-	99	64.706
ENSAMXG00000039432	-	94	48.370	ENSAMXG00000012589	-	83	48.370
ENSAMXG00000039432	-	92	42.143	ENSAMXG00000033001	-	50	42.143
ENSAMXG00000039432	-	93	59.908	ENSAMXG00000043019	-	92	59.908
ENSAMXG00000039432	-	93	75.477	ENSAMXG00000043251	-	95	75.477
ENSAMXG00000039432	-	93	72.866	ENSAMXG00000000353	-	93	73.099
ENSAMXG00000039432	-	99	58.955	ENSAMXG00000033124	-	66	58.955
ENSAMXG00000039432	-	100	60.000	ENSAMXG00000040806	-	93	60.000
ENSAMXG00000039432	-	93	43.902	ENSAMXG00000042191	zbtb47a	70	43.902
ENSAMXG00000039432	-	95	66.857	ENSAMXG00000032619	-	97	66.857
ENSAMXG00000039432	-	99	65.529	ENSAMXG00000040677	-	88	65.529
ENSAMXG00000039432	-	95	59.709	ENSAMXG00000019489	-	93	59.709
ENSAMXG00000039432	-	100	62.286	ENSAMXG00000035875	-	99	62.286
ENSAMXG00000039432	-	99	70.000	ENSAMXG00000043423	-	80	70.000
ENSAMXG00000039432	-	95	63.454	ENSAMXG00000029109	-	86	63.454
ENSAMXG00000039432	-	95	41.284	ENSAMXG00000038235	snai2	56	41.284
ENSAMXG00000039432	-	93	72.687	ENSAMXG00000031646	-	94	72.687
ENSAMXG00000039432	-	100	69.231	ENSAMXG00000039408	-	97	69.231
ENSAMXG00000039432	-	99	44.706	ENSAMXG00000007441	-	66	44.706
ENSAMXG00000039432	-	100	66.090	ENSAMXG00000036849	-	96	66.090
ENSAMXG00000039432	-	95	56.126	ENSAMXG00000042784	-	92	57.895
ENSAMXG00000039432	-	97	63.281	ENSAMXG00000044110	-	90	64.499
ENSAMXG00000039432	-	95	64.706	ENSAMXG00000029161	-	81	64.706
ENSAMXG00000039432	-	93	72.611	ENSAMXG00000032457	-	91	72.611
ENSAMXG00000039432	-	94	70.312	ENSAMXG00000035683	-	94	70.312
ENSAMXG00000039432	-	94	73.000	ENSAMXG00000030530	-	98	73.000
ENSAMXG00000039432	-	93	71.117	ENSAMXG00000009558	-	93	71.117
ENSAMXG00000039432	-	99	49.763	ENSAMXG00000007973	-	98	49.359
ENSAMXG00000039432	-	94	72.581	ENSAMXG00000035809	-	99	72.581
ENSAMXG00000039432	-	95	66.129	ENSAMXG00000010078	-	85	66.129
ENSAMXG00000039432	-	99	70.307	ENSAMXG00000035690	-	79	70.307
ENSAMXG00000039432	-	94	75.852	ENSAMXG00000039162	-	95	75.852
ENSAMXG00000039432	-	93	54.545	ENSAMXG00000013492	-	97	48.772
ENSAMXG00000039432	-	99	41.810	ENSAMXG00000035967	znf384l	52	41.810
ENSAMXG00000039432	-	97	61.364	ENSAMXG00000036915	-	95	61.364
ENSAMXG00000039432	-	98	34.902	ENSAMXG00000008771	PRDM15	55	34.902
ENSAMXG00000039432	-	95	65.649	ENSAMXG00000044028	-	98	65.649
ENSAMXG00000039432	-	93	70.845	ENSAMXG00000041128	-	87	70.845
ENSAMXG00000039432	-	95	61.818	ENSAMXG00000043978	-	87	61.832
ENSAMXG00000039432	-	92	39.640	ENSAMXG00000044034	-	73	40.541
ENSAMXG00000039432	-	99	70.213	ENSAMXG00000036233	-	93	70.213
ENSAMXG00000039432	-	95	64.055	ENSAMXG00000032212	-	86	64.055
ENSAMXG00000039432	-	98	49.296	ENSAMXG00000034333	-	89	49.296
ENSAMXG00000039432	-	93	74.659	ENSAMXG00000039879	-	98	74.659
ENSAMXG00000039432	-	95	35.135	ENSAMXG00000016921	znf341	52	35.135
ENSAMXG00000039432	-	93	76.022	ENSAMXG00000024978	-	96	76.022
ENSAMXG00000039432	-	97	54.450	ENSAMXG00000042746	-	90	54.450
ENSAMXG00000039432	-	95	63.445	ENSAMXG00000043291	-	73	65.238
ENSAMXG00000039432	-	93	66.456	ENSAMXG00000010930	-	81	66.456
ENSAMXG00000039432	-	93	75.204	ENSAMXG00000039744	-	99	75.204
ENSAMXG00000039432	-	99	67.030	ENSAMXG00000034847	-	89	66.857
ENSAMXG00000039432	-	95	59.880	ENSAMXG00000029960	-	97	59.880
ENSAMXG00000039432	-	94	57.308	ENSAMXG00000030659	-	84	57.308
ENSAMXG00000039432	-	95	61.685	ENSAMXG00000033201	-	96	61.685
ENSAMXG00000039432	-	93	63.205	ENSAMXG00000039881	-	82	64.201
ENSAMXG00000039432	-	96	68.634	ENSAMXG00000009776	-	99	68.634
ENSAMXG00000039432	-	97	65.248	ENSAMXG00000042167	-	98	65.248
ENSAMXG00000039432	-	89	43.827	ENSAMXG00000035246	-	68	43.827
ENSAMXG00000039432	-	95	49.864	ENSAMXG00000035127	-	92	50.196
ENSAMXG00000039432	-	93	46.903	ENSAMXG00000041862	-	96	46.903
ENSAMXG00000039432	-	99	70.647	ENSAMXG00000041861	-	90	70.647
ENSAMXG00000039432	-	95	41.954	ENSAMXG00000041864	prdm5	89	41.954
ENSAMXG00000039432	-	93	68.562	ENSAMXG00000039182	-	78	68.562
ENSAMXG00000039432	-	93	71.284	ENSAMXG00000030911	-	65	71.284
ENSAMXG00000039432	-	93	59.350	ENSAMXG00000034344	-	74	59.350
ENSAMXG00000039432	-	95	75.163	ENSAMXG00000029878	-	92	75.163
ENSAMXG00000039432	-	95	61.449	ENSAMXG00000039770	-	85	61.449
ENSAMXG00000039432	-	99	75.593	ENSAMXG00000017609	-	80	75.593
ENSAMXG00000039432	-	95	73.276	ENSAMXG00000036567	-	84	73.276
ENSAMXG00000039432	-	100	67.302	ENSAMXG00000037760	-	100	67.302
ENSAMXG00000039432	-	92	63.240	ENSAMXG00000013274	-	96	63.240
ENSAMXG00000039432	-	93	74.387	ENSAMXG00000018161	-	91	74.387
ENSAMXG00000039432	-	98	62.245	ENSAMXG00000043541	-	87	58.077
ENSAMXG00000039432	-	100	62.698	ENSAMXG00000034402	-	98	62.698
ENSAMXG00000039432	-	98	63.889	ENSAMXG00000029518	-	59	71.739
ENSAMXG00000039432	-	96	66.187	ENSAMXG00000042938	-	90	66.187
ENSAMXG00000039432	-	93	78.400	ENSAMXG00000041404	-	96	77.344
ENSAMXG00000039432	-	97	72.047	ENSAMXG00000003002	-	97	72.047
ENSAMXG00000039432	-	93	61.035	ENSAMXG00000017959	-	94	61.035
ENSAMXG00000039432	-	94	67.300	ENSAMXG00000039752	-	89	67.300

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039432	-	99	50.000	ENSATEG00000010859	-	96	52.439	Anabas_testudineus
ENSAMXG00000039432	-	94	54.545	ENSCPBG00000009849	-	83	54.545	Chrysemys_picta_bellii
ENSAMXG00000039432	-	94	58.278	ENSELUG00000009575	-	99	55.556	Esox_lucius
ENSAMXG00000039432	-	99	62.816	ENSIPUG00000015121	-	59	62.816	Ictalurus_punctatus
ENSAMXG00000039432	-	97	44.807	ENSKMAG00000000543	-	99	44.807	Kryptolebias_marmoratus
ENSAMXG00000039432	-	96	43.844	ENSMAMG00000016519	-	88	48.235	Mastacembelus_armatus
ENSAMXG00000039432	-	98	46.281	ENSMZEG00005020574	-	84	46.281	Maylandia_zebra
ENSAMXG00000039432	-	97	43.275	ENSONIG00000007088	-	100	43.275	Oreochromis_niloticus
ENSAMXG00000039432	-	97	55.853	ENSPSIG00000000075	-	77	55.853	Pelodiscus_sinensis
ENSAMXG00000039432	-	100	65.493	ENSPNAG00000012215	-	93	65.493	Pygocentrus_nattereri
ENSAMXG00000039432	-	98	62.130	ENSPNAG00000008480	-	97	62.130	Pygocentrus_nattereri
ENSAMXG00000039432	-	95	43.767	ENSSMAG00000007396	-	83	43.767	Scophthalmus_maximus
ENSAMXG00000039432	-	95	58.042	ENSTBEG00000012287	-	99	58.042	Tupaia_belangeri