EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000039454 (Gene tree)
Gene ID
103026862
Gene Symbol
u2af2b
Alias
wu:fb73g02|zgc:77804
Full Name
splicing factor U2AF 65 kDa subunit
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
11428 bases
Position
chrAPWO02000060.1:744127-755554
Accession
103026862
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000039825RRM_1PF00076.223e-3613
ENSAMXP00000039825RRM_1PF00076.223e-3623
ENSAMXP00000039825RRM_1PF00076.223e-3633
ENSAMXP00000043126RRM_1PF00076.223.1e-3613
ENSAMXP00000043126RRM_1PF00076.223.1e-3623
ENSAMXP00000043126RRM_1PF00076.223.1e-3633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000034375-4952XM_007258246ENSAMXP00000039825456 (aa)XP_007258308UPI000440F90A
ENSAMXT00000038102-4973XM_007258244ENSAMXP00000043126463 (aa)XP_007258306W5KQ68
Gene Model
Click here to download ENSAMXG00000039454's gene model file
Pathways
Pathway IDPathway NameSource
amex03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039454's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000039454u2af2b6637.255ENSAMXG00000041030puf60b5637.255
ENSAMXG00000039454u2af2b9988.913ENSAMXG00000033347u2af2a9989.765
ENSAMXG00000039454u2af2b7935.294ENSAMXG00000036570puf60a6035.294
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000039454u2af2b9985.138ENSG00000063244U2AF29992.941Homo_sapiens
ENSAMXG00000039454u2af2b9973.093ENSAPOG00000002208-10072.921Acanthochromis_polyacanthus
ENSAMXG00000039454u2af2b6790.093ENSAPOG00000023155u2af2a9990.093Acanthochromis_polyacanthus
ENSAMXG00000039454u2af2b7790.598ENSAMEG00000003864U2AF28590.341Ailuropoda_melanoleuca
ENSAMXG00000039454u2af2b9671.306ENSACIG00000014173-8678.412Amphilophus_citrinellus
ENSAMXG00000039454u2af2b8595.630ENSACIG00000005749u2af2a9195.178Amphilophus_citrinellus
ENSAMXG00000039454u2af2b9992.576ENSAOCG00000015571u2af2a10092.795Amphiprion_ocellaris
ENSAMXG00000039454u2af2b9973.093ENSAOCG00000003595-10072.921Amphiprion_ocellaris
ENSAMXG00000039454u2af2b8595.887ENSAPEG00000009376u2af2a9295.674Amphiprion_percula
ENSAMXG00000039454u2af2b9673.510ENSAPEG00000020062-8480.203Amphiprion_percula
ENSAMXG00000039454u2af2b9988.936ENSATEG00000022332u2af2a9989.574Anabas_testudineus
ENSAMXG00000039454u2af2b9673.465ENSATEG00000020577-8680.711Anabas_testudineus
ENSAMXG00000039454u2af2b9986.354ENSACAG00000015489U2AF29986.354Anolis_carolinensis
ENSAMXG00000039454u2af2b9984.401ENSANAG00000028042U2AF29985.515Aotus_nancymaae
ENSAMXG00000039454u2af2b9989.362ENSACLG00000022181u2af2a9989.149Astatotilapia_calliptera
ENSAMXG00000039454u2af2b9973.093ENSACLG00000020793-10072.921Astatotilapia_calliptera
ENSAMXG00000039454u2af2b9988.377ENSBTAG00000002830U2AF29988.816Bos_taurus
ENSAMXG00000039454u2af2b8858.396WBGene00006697uaf-110053.020Caenorhabditis_elegans
ENSAMXG00000039454u2af2b9984.632ENSCJAG00000017128U2AF29985.474Callithrix_jacchus
ENSAMXG00000039454u2af2b9985.138ENSCAFG00000002551U2AF29985.987Canis_familiaris
ENSAMXG00000039454u2af2b8790.750ENSCAFG00020015445U2AF28490.750Canis_lupus_dingo
ENSAMXG00000039454u2af2b8676.000ENSCHIG00000023595U2AF28775.622Capra_hircus
ENSAMXG00000039454u2af2b9984.632ENSTSYG00000007432U2AF29985.474Carlito_syrichta
ENSAMXG00000039454u2af2b8691.184ENSCAPG00000008466U2AF28790.955Cavia_aperea
ENSAMXG00000039454u2af2b9984.632ENSCPOG00000001582U2AF29985.474Cavia_porcellus
ENSAMXG00000039454u2af2b9984.632ENSCCAG00000023336U2AF29985.474Cebus_capucinus
ENSAMXG00000039454u2af2b9985.138ENSCATG00000004637U2AF29985.987Cercocebus_atys
ENSAMXG00000039454u2af2b9985.138ENSCLAG00000000596U2AF29985.987Chinchilla_lanigera
ENSAMXG00000039454u2af2b9985.138ENSCSAG00000001722U2AF29985.987Chlorocebus_sabaeus
ENSAMXG00000039454u2af2b8689.924ENSCPBG00000004485U2AF29991.531Chrysemys_picta_bellii
ENSAMXG00000039454u2af2b8669.565ENSCING00000003455-7870.157Ciona_intestinalis
ENSAMXG00000039454u2af2b8568.638ENSCSAVG00000006813-9761.978Ciona_savignyi
ENSAMXG00000039454u2af2b9184.615ENSCANG00000031002-9685.548Colobus_angolensis_palliatus
ENSAMXG00000039454u2af2b9978.936ENSCANG00000043845-9980.851Colobus_angolensis_palliatus
ENSAMXG00000039454u2af2b9977.825ENSCGRG00001007486-9978.038Cricetulus_griseus_chok1gshd
ENSAMXG00000039454u2af2b9988.596ENSCGRG00001003185-9989.035Cricetulus_griseus_chok1gshd
ENSAMXG00000039454u2af2b9977.825ENSCGRG00000018587-9978.038Cricetulus_griseus_crigri
ENSAMXG00000039454u2af2b5190.043ENSCGRG00000004524-7986.122Cricetulus_griseus_crigri
ENSAMXG00000039454u2af2b7389.172ENSCSEG00000018709u2af2a8289.172Cynoglossus_semilaevis
ENSAMXG00000039454u2af2b9971.795ENSCSEG00000020504-9469.165Cynoglossus_semilaevis
ENSAMXG00000039454u2af2b9991.921ENSCVAG00000001259u2af2a9992.140Cyprinodon_variegatus
ENSAMXG00000039454u2af2b9973.093ENSCVAG00000023307-10072.921Cyprinodon_variegatus
ENSAMXG00000039454u2af2b9989.655ENSDARG00000012505u2af2a9988.578Danio_rerio
ENSAMXG00000039454u2af2b9992.194ENSDARG00000011740u2af2b9990.084Danio_rerio
ENSAMXG00000039454u2af2b9184.615ENSDNOG00000047039U2AF29685.548Dasypus_novemcinctus
ENSAMXG00000039454u2af2b9984.632ENSDORG00000003250U2af29985.474Dipodomys_ordii
ENSAMXG00000039454u2af2b8570.077FBgn0005411U2af5010069.811Drosophila_melanogaster
ENSAMXG00000039454u2af2b8649.767FBgn0034834LS28552.513Drosophila_melanogaster
ENSAMXG00000039454u2af2b8362.105ENSEBUG00000001732U2AF28462.205Eptatretus_burgeri
ENSAMXG00000039454u2af2b9071.223ENSEBUG00000010917U2AF210067.692Eptatretus_burgeri
ENSAMXG00000039454u2af2b8790.547ENSEASG00005020708U2AF27890.977Equus_asinus_asinus
ENSAMXG00000039454u2af2b9988.596ENSECAG00000010110U2AF29989.035Equus_caballus
ENSAMXG00000039454u2af2b9986.928ENSELUG00000022291u2af2b9987.146Esox_lucius
ENSAMXG00000039454u2af2b9972.824ENSELUG00000018459-10070.362Esox_lucius
ENSAMXG00000039454u2af2b9987.083ENSELUG00000015850u2af2a9987.238Esox_lucius
ENSAMXG00000039454u2af2b9984.632ENSFCAG00000011504U2AF29985.474Felis_catus
ENSAMXG00000039454u2af2b8691.184ENSFDAG00000011264U2AF28490.955Fukomys_damarensis
ENSAMXG00000039454u2af2b9991.921ENSFHEG00000016025u2af2a9992.140Fundulus_heteroclitus
ENSAMXG00000039454u2af2b9988.913ENSGMOG00000004535u2af2a9990.435Gadus_morhua
ENSAMXG00000039454u2af2b9885.808ENSGALG00000052748U2AF26585.808Gallus_gallus
ENSAMXG00000039454u2af2b9974.459ENSGAFG00000005628-10073.160Gambusia_affinis
ENSAMXG00000039454u2af2b9991.921ENSGAFG00000013626u2af2a8892.140Gambusia_affinis
ENSAMXG00000039454u2af2b9991.503ENSGACG00000010632U2AF29991.721Gasterosteus_aculeatus
ENSAMXG00000039454u2af2b9971.368ENSGACG00000014500-10070.675Gasterosteus_aculeatus
ENSAMXG00000039454u2af2b6791.531ENSGAGG00000011849U2AF29991.531Gopherus_agassizii
ENSAMXG00000039454u2af2b5679.377ENSGGOG00000036399-9679.377Gorilla_gorilla
ENSAMXG00000039454u2af2b9973.093ENSHBUG00000017424-10072.921Haplochromis_burtoni
ENSAMXG00000039454u2af2b9989.362ENSHBUG00000013935u2af2a9989.149Haplochromis_burtoni
ENSAMXG00000039454u2af2b9984.632ENSHGLG00000005889U2AF29985.474Heterocephalus_glaber_female
ENSAMXG00000039454u2af2b8691.184ENSHGLG00100004757U2AF28790.955Heterocephalus_glaber_male
ENSAMXG00000039454u2af2b9989.032ENSHCOG00000019367u2af2a9989.892Hippocampus_comes
ENSAMXG00000039454u2af2b10095.680ENSIPUG00000009077u2af210095.680Ictalurus_punctatus
ENSAMXG00000039454u2af2b9974.342ENSIPUG00000009844-10072.527Ictalurus_punctatus
ENSAMXG00000039454u2af2b9987.662ENSIPUG00000007717u2af2a9988.312Ictalurus_punctatus
ENSAMXG00000039454u2af2b9984.632ENSSTOG00000019595U2AF29985.474Ictidomys_tridecemlineatus
ENSAMXG00000039454u2af2b9984.632ENSJJAG00000017705U2af29985.474Jaculus_jaculus
ENSAMXG00000039454u2af2b9691.818ENSKMAG00000005960u2af2a9988.723Kryptolebias_marmoratus
ENSAMXG00000039454u2af2b9671.368ENSLBEG00000005001-8678.164Labrus_bergylta
ENSAMXG00000039454u2af2b9992.576ENSLBEG00000016162u2af2a9992.795Labrus_bergylta
ENSAMXG00000039454u2af2b8092.098ENSLACG00000001648U2AF29992.098Latimeria_chalumnae
ENSAMXG00000039454u2af2b6095.273ENSLOCG00000008050u2af2b8094.265Lepisosteus_oculatus
ENSAMXG00000039454u2af2b9972.939ENSLOCG00000010843-10073.561Lepisosteus_oculatus
ENSAMXG00000039454u2af2b9985.987ENSLAFG00000018056-9985.987Loxodonta_africana
ENSAMXG00000039454u2af2b9976.858ENSLAFG00000028496-9976.221Loxodonta_africana
ENSAMXG00000039454u2af2b9984.632ENSMFAG00000038383U2AF29985.474Macaca_fascicularis
ENSAMXG00000039454u2af2b9984.421ENSMMUG00000004810U2AF29985.263Macaca_mulatta
ENSAMXG00000039454u2af2b9985.138ENSMNEG00000042096U2AF29985.987Macaca_nemestrina
ENSAMXG00000039454u2af2b8691.858ENSMLEG00000032219U2AF27791.624Mandrillus_leucophaeus
ENSAMXG00000039454u2af2b9971.429ENSMAMG00000020158-10071.642Mastacembelus_armatus
ENSAMXG00000039454u2af2b9990.948ENSMAMG00000019817u2af2a9990.948Mastacembelus_armatus
ENSAMXG00000039454u2af2b9973.093ENSMZEG00005023318-10072.921Maylandia_zebra
ENSAMXG00000039454u2af2b9992.358ENSMZEG00005016563u2af2a9992.576Maylandia_zebra
ENSAMXG00000039454u2af2b8691.184ENSMAUG00000008180U2af28590.955Mesocricetus_auratus
ENSAMXG00000039454u2af2b9985.138ENSMICG00000027681U2AF29985.987Microcebus_murinus
ENSAMXG00000039454u2af2b9984.632ENSMOCG00000013214-9985.474Microtus_ochrogaster
ENSAMXG00000039454u2af2b9978.465ENSMOCG00000007227-9977.944Microtus_ochrogaster
ENSAMXG00000039454u2af2b6788.599ENSMOCG00000001018-9988.599Microtus_ochrogaster
ENSAMXG00000039454u2af2b9968.511ENSMMOG00000000531-10068.230Mola_mola
ENSAMXG00000039454u2af2b8894.776ENSMMOG00000016600u2af2a9195.178Mola_mola
ENSAMXG00000039454u2af2b9991.921ENSMALG00000009985u2af2a9991.921Monopterus_albus
ENSAMXG00000039454u2af2b9985.138MGP_CAROLIEiJ_G0029150U2af29985.987Mus_caroli
ENSAMXG00000039454u2af2b9985.138ENSMUSG00000030435U2af29991.531Mus_musculus
ENSAMXG00000039454u2af2b9985.138MGP_PahariEiJ_G0021017U2af29985.987Mus_pahari
ENSAMXG00000039454u2af2b9985.138MGP_SPRETEiJ_G0030203U2af29985.987Mus_spretus
ENSAMXG00000039454u2af2b9985.138ENSMPUG00000007135U2AF29985.987Mustela_putorius_furo
ENSAMXG00000039454u2af2b5284.232ENSMLUG00000011051-9984.232Myotis_lucifugus
ENSAMXG00000039454u2af2b9984.632ENSNGAG00000020369U2af29985.474Nannospalax_galili
ENSAMXG00000039454u2af2b9671.828ENSNBRG00000011100-8678.465Neolamprologus_brichardi
ENSAMXG00000039454u2af2b9989.362ENSNBRG00000002568u2af2a9989.149Neolamprologus_brichardi
ENSAMXG00000039454u2af2b9974.459ENSNLEG00000010562U2AF29991.531Nomascus_leucogenys
ENSAMXG00000039454u2af2b8677.692ENSMEUG00000002346U2AF28577.892Notamacropus_eugenii
ENSAMXG00000039454u2af2b9979.579ENSODEG00000012729-9980.421Octodon_degus
ENSAMXG00000039454u2af2b9863.556ENSODEG00000009254-9964.955Octodon_degus
ENSAMXG00000039454u2af2b9973.093ENSONIG00000009682-10072.921Oreochromis_niloticus
ENSAMXG00000039454u2af2b9987.949ENSONIG00000012793u2af2a9988.584Oreochromis_niloticus
ENSAMXG00000039454u2af2b9987.872ENSORLG00000011545u2af2a9987.872Oryzias_latipes
ENSAMXG00000039454u2af2b9987.872ENSORLG00020006941u2af2a9987.872Oryzias_latipes_hni
ENSAMXG00000039454u2af2b9987.872ENSORLG00015012843u2af2a9987.872Oryzias_latipes_hsok
ENSAMXG00000039454u2af2b9988.486ENSOMEG00000011386u2af2a9988.913Oryzias_melastigma
ENSAMXG00000039454u2af2b9753.947ENSOGAG00000034729-7860.763Otolemur_garnettii
ENSAMXG00000039454u2af2b9984.632ENSOGAG00000007206-9985.474Otolemur_garnettii
ENSAMXG00000039454u2af2b9976.507ENSOARG00000001091U2AF29976.715Ovis_aries
ENSAMXG00000039454u2af2b9984.632ENSPPAG00000039782U2AF29985.474Pan_paniscus
ENSAMXG00000039454u2af2b9984.632ENSPPRG00000013843U2AF29985.474Panthera_pardus
ENSAMXG00000039454u2af2b9977.322ENSPTIG00000005489U2AF28684.962Panthera_tigris_altaica
ENSAMXG00000039454u2af2b9984.632ENSPTRG00000011523U2AF29991.531Pan_troglodytes
ENSAMXG00000039454u2af2b9985.138ENSPANG00000008459U2AF29985.987Papio_anubis
ENSAMXG00000039454u2af2b9974.310ENSPKIG00000014878-10071.855Paramormyrops_kingsleyae
ENSAMXG00000039454u2af2b9990.812ENSPKIG00000024346u2af2b9194.162Paramormyrops_kingsleyae
ENSAMXG00000039454u2af2b8669.608ENSPSIG00000008014U2AF28769.438Pelodiscus_sinensis
ENSAMXG00000039454u2af2b9684.667ENSPMGG00000022980u2af2a8986.634Periophthalmus_magnuspinnatus
ENSAMXG00000039454u2af2b9984.632ENSPEMG00000007378U2af29991.531Peromyscus_maniculatus_bairdii
ENSAMXG00000039454u2af2b8376.364ENSPMAG00000004097u2af2a9173.747Petromyzon_marinus
ENSAMXG00000039454u2af2b9984.421ENSPCIG00000018013U2AF29985.263Phascolarctos_cinereus
ENSAMXG00000039454u2af2b9988.936ENSPFOG00000010799u2af2a10088.723Poecilia_formosa
ENSAMXG00000039454u2af2b9975.378ENSPFOG00000006433-10073.377Poecilia_formosa
ENSAMXG00000039454u2af2b8680.662ENSPLAG00000003275-8780.457Poecilia_latipinna
ENSAMXG00000039454u2af2b9991.921ENSPLAG00000014365u2af2a9992.140Poecilia_latipinna
ENSAMXG00000039454u2af2b9991.921ENSPMEG00000002969u2af2a9992.140Poecilia_mexicana
ENSAMXG00000039454u2af2b8680.407ENSPMEG00000003734-8780.203Poecilia_mexicana
ENSAMXG00000039454u2af2b9972.068ENSPREG00000013036-10073.826Poecilia_reticulata
ENSAMXG00000039454u2af2b9692.273ENSPREG00000008739u2af2a9988.723Poecilia_reticulata
ENSAMXG00000039454u2af2b5989.818ENSPPYG00000010429-7789.818Pongo_abelii
ENSAMXG00000039454u2af2b9968.697ENSPCAG00000014399-9969.538Procavia_capensis
ENSAMXG00000039454u2af2b8677.863ENSPCAG00000003709-9379.003Procavia_capensis
ENSAMXG00000039454u2af2b9984.632ENSPCOG00000025870U2AF29985.474Propithecus_coquereli
ENSAMXG00000039454u2af2b9984.211ENSPVAG00000004540U2AF29985.053Pteropus_vampyrus
ENSAMXG00000039454u2af2b9989.362ENSPNYG00000001438u2af2a9989.149Pundamilia_nyererei
ENSAMXG00000039454u2af2b9973.093ENSPNYG00000011605-10072.921Pundamilia_nyererei
ENSAMXG00000039454u2af2b9989.827ENSPNAG00000017620u2af2a9990.909Pygocentrus_nattereri
ENSAMXG00000039454u2af2b9972.766ENSPNAG00000007182-10072.281Pygocentrus_nattereri
ENSAMXG00000039454u2af2b10096.930ENSPNAG00000027289u2af2b10096.930Pygocentrus_nattereri
ENSAMXG00000039454u2af2b9985.138ENSRNOG00000015914U2af29985.987Rattus_norvegicus
ENSAMXG00000039454u2af2b9984.421ENSRBIG00000041018U2AF29985.263Rhinopithecus_bieti
ENSAMXG00000039454u2af2b9979.193ENSRROG00000031238-9980.892Rhinopithecus_roxellana
ENSAMXG00000039454u2af2b7791.525ENSRROG00000031103-8691.268Rhinopithecus_roxellana
ENSAMXG00000039454u2af2b9985.138ENSSBOG00000023891U2AF29985.987Saimiri_boliviensis_boliviensis
ENSAMXG00000039454u2af2b5874.434ENSSHAG00000001167U2AF26679.298Sarcophilus_harrisii
ENSAMXG00000039454u2af2b8793.216ENSSFOG00015019182u2af2b8993.909Scleropages_formosus
ENSAMXG00000039454u2af2b9973.673ENSSFOG00015003884-9479.644Scleropages_formosus
ENSAMXG00000039454u2af2b9992.157ENSSMAG00000012582u2af2a9992.593Scophthalmus_maximus
ENSAMXG00000039454u2af2b9973.093ENSSMAG00000013779-10072.708Scophthalmus_maximus
ENSAMXG00000039454u2af2b9992.358ENSSDUG00000009457u2af2a10092.576Seriola_dumerili
ENSAMXG00000039454u2af2b9869.917ENSSDUG00000021434-8278.079Seriola_dumerili
ENSAMXG00000039454u2af2b9992.358ENSSLDG00000022742u2af2a9992.576Seriola_lalandi_dorsalis
ENSAMXG00000039454u2af2b9671.520ENSSLDG00000016151-8678.079Seriola_lalandi_dorsalis
ENSAMXG00000039454u2af2b9985.232ENSSPUG00000010229U2AF29985.232Sphenodon_punctatus
ENSAMXG00000039454u2af2b9692.744ENSSPAG00000022519u2af2a9989.362Stegastes_partitus
ENSAMXG00000039454u2af2b9973.305ENSSPAG00000005241-10073.134Stegastes_partitus
ENSAMXG00000039454u2af2b9988.596ENSSSCG00000034815U2AF29989.035Sus_scrofa
ENSAMXG00000039454u2af2b9690.476ENSTRUG00000005514u2af2a8792.893Takifugu_rubripes
ENSAMXG00000039454u2af2b9972.103ENSTNIG00000011257-10072.511Tetraodon_nigroviridis
ENSAMXG00000039454u2af2b9989.979ENSTNIG00000008106U2AF29989.126Tetraodon_nigroviridis
ENSAMXG00000039454u2af2b7787.042ENSTBEG00000009104U2AF29687.042Tupaia_belangeri
ENSAMXG00000039454u2af2b9984.632ENSTTRG00000000987U2AF29985.474Tursiops_truncatus
ENSAMXG00000039454u2af2b8790.977ENSUAMG00000019883U2AF28790.977Ursus_americanus
ENSAMXG00000039454u2af2b8790.977ENSUMAG00000024586U2AF29991.531Ursus_maritimus
ENSAMXG00000039454u2af2b8692.308ENSVVUG00000006956U2AF25991.624Vulpes_vulpes
ENSAMXG00000039454u2af2b9987.554ENSXETG00000019128u2af29986.882Xenopus_tropicalis
ENSAMXG00000039454u2af2b9692.255ENSXCOG00000019406u2af2a9094.924Xiphophorus_couchianus
ENSAMXG00000039454u2af2b9972.281ENSXMAG00000000768-9672.495Xiphophorus_maculatus
ENSAMXG00000039454u2af2b9991.921ENSXMAG00000011979u2af2a9992.140Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us