EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000039494 (Gene tree)
Gene ID
103034629
Gene Symbol
-
Alias
-
Full Name
pre-mRNA-splicing factor 38B
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
10453 bases
Position
chrAPWO02000053.1:614618-625070
Accession
103034629
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000036385PRP38PF03371.152.3e-5511
ENSAMXP00000052001PRP38PF03371.152.5e-5511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000032694-1722-ENSAMXP00000036385573 (aa)--
ENSAMXT00000034023-1770XM_007236634ENSAMXP00000052001589 (aa)XP_007236696-
Gene Model
Click here to download ENSAMXG00000039494's gene model file
Pathways
Pathway IDPathway NameSource
amex03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039494's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000039494-5180.205ENSELUG00000010390-5484.068Esox_lucius
ENSAMXG00000039494-5079.038ENSGMOG00000012080-6282.414Gadus_morhua
ENSAMXG00000039494-5084.880ENSGAFG00000008943-6086.170Gambusia_affinis
ENSAMXG00000039494-5566.761ENSHCOG00000001071-6286.572Hippocampus_comes
ENSAMXG00000039494-5766.667ENSLACG00000015511-7265.835Latimeria_chalumnae
ENSAMXG00000039494-5277.244ENSMODG00000002350-8883.813Monodelphis_domestica
ENSAMXG00000039494-5769.942ENSONIG00000010129-6186.572Oreochromis_niloticus
ENSAMXG00000039494-5184.589ENSORLG00000015621-8892.810Oryzias_latipes
ENSAMXG00000039494-5184.589ENSORLG00020016276-8892.810Oryzias_latipes_hni
ENSAMXG00000039494-5184.589ENSORLG00015016270-7492.810Oryzias_latipes_hsok
ENSAMXG00000039494-5876.124ENSPKIG00000017291-5483.849Paramormyrops_kingsleyae
ENSAMXG00000039494-5679.077ENSPKIG00000004815-5585.053Paramormyrops_kingsleyae
ENSAMXG00000039494-5085.223ENSPFOG00000004025-8193.464Poecilia_formosa
ENSAMXG00000039494-5085.223ENSPMEG00000004807-5986.525Poecilia_mexicana
ENSAMXG00000039494-5084.880ENSPREG00000015599-8393.464Poecilia_reticulata
ENSAMXG00000039494-5193.814ENSPNAG00000017484-5793.471Pygocentrus_nattereri
ENSAMXG00000039494-7064.407ENSXETG00000005260prpf38b5483.453Xenopus_tropicalis
ENSAMXG00000039494-5084.880ENSXCOG00000008329-6086.170Xiphophorus_couchianus

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