EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000039700 (Gene tree)
Gene ID: 103047152
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF7.1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 768 bases
Position: chr16:6016896-6017663
Accession: 103047152
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000003215	zf-C2H2	PF00096.26	1e-45	1	7
ENSAMXP00000003215	zf-C2H2	PF00096.26	1e-45	2	7
ENSAMXP00000003215	zf-C2H2	PF00096.26	1e-45	3	7
ENSAMXP00000003215	zf-C2H2	PF00096.26	1e-45	4	7
ENSAMXP00000003215	zf-C2H2	PF00096.26	1e-45	5	7
ENSAMXP00000003215	zf-C2H2	PF00096.26	1e-45	6	7
ENSAMXP00000003215	zf-C2H2	PF00096.26	1e-45	7	7
ENSAMXP00000003215	zf-met	PF12874.7	1.3e-09	1	2
ENSAMXP00000003215	zf-met	PF12874.7	1.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000003215	-	768	XM_015603925	ENSAMXP00000003215	255 (aa)	XP_015459411	W5K6K4

Gene Model

Click here to download ENSAMXG00000039700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000039700	-	98	57.273	ENSAMXG00000038325	-	99	57.273
ENSAMXG00000039700	-	95	68.780	ENSAMXG00000038324	-	76	68.780
ENSAMXG00000039700	-	95	61.257	ENSAMXG00000042593	-	99	61.257
ENSAMXG00000039700	-	95	61.860	ENSAMXG00000033201	-	98	61.860
ENSAMXG00000039700	-	97	56.338	ENSAMXG00000033124	-	68	56.338
ENSAMXG00000039700	-	94	36.810	ENSAMXG00000035525	znf646	72	36.810
ENSAMXG00000039700	-	89	43.827	ENSAMXG00000034934	-	79	43.827
ENSAMXG00000039700	-	88	69.307	ENSAMXG00000025455	-	98	69.307
ENSAMXG00000039700	-	96	61.842	ENSAMXG00000039432	-	99	61.842
ENSAMXG00000039700	-	91	69.302	ENSAMXG00000033500	-	93	69.302
ENSAMXG00000039700	-	90	69.159	ENSAMXG00000038636	-	98	69.159
ENSAMXG00000039700	-	85	48.889	ENSAMXG00000037382	-	52	48.889
ENSAMXG00000039700	-	96	43.891	ENSAMXG00000033299	-	79	43.891
ENSAMXG00000039700	-	95	53.704	ENSAMXG00000035286	si:ch1073-224n8.1	83	42.727
ENSAMXG00000039700	-	90	58.247	ENSAMXG00000041650	-	87	58.247
ENSAMXG00000039700	-	95	51.323	ENSAMXG00000013492	-	98	46.818
ENSAMXG00000039700	-	95	66.818	ENSAMXG00000035690	-	79	66.818
ENSAMXG00000039700	-	96	58.152	ENSAMXG00000044107	-	99	58.152
ENSAMXG00000039700	-	89	73.684	ENSAMXG00000030911	-	66	73.684
ENSAMXG00000039700	-	91	54.545	ENSAMXG00000042784	-	94	55.263
ENSAMXG00000039700	-	91	69.091	ENSAMXG00000042938	-	68	69.091
ENSAMXG00000039700	-	93	63.556	ENSAMXG00000009776	-	96	63.556
ENSAMXG00000039700	-	95	58.850	ENSAMXG00000032237	-	98	58.850
ENSAMXG00000039700	-	90	42.045	ENSAMXG00000007441	-	57	47.917
ENSAMXG00000039700	-	92	40.373	ENSAMXG00000024907	znf319b	85	40.373
ENSAMXG00000039700	-	91	63.426	ENSAMXG00000032619	-	92	63.426
ENSAMXG00000039700	-	94	62.441	ENSAMXG00000030742	-	99	62.441
ENSAMXG00000039700	-	94	38.767	ENSAMXG00000041864	prdm5	79	38.767
ENSAMXG00000039700	-	93	60.000	ENSAMXG00000037709	-	89	60.000
ENSAMXG00000039700	-	95	43.125	ENSAMXG00000006669	GFI1	62	43.125
ENSAMXG00000039700	-	90	68.372	ENSAMXG00000007092	-	96	68.372
ENSAMXG00000039700	-	91	67.143	ENSAMXG00000039004	-	88	67.143
ENSAMXG00000039700	-	95	67.480	ENSAMXG00000040212	-	88	68.444
ENSAMXG00000039700	-	93	54.321	ENSAMXG00000043541	-	85	54.321
ENSAMXG00000039700	-	91	59.914	ENSAMXG00000037326	-	93	62.037
ENSAMXG00000039700	-	89	70.222	ENSAMXG00000031501	-	96	70.222
ENSAMXG00000039700	-	88	66.834	ENSAMXG00000035920	-	90	66.834
ENSAMXG00000039700	-	89	63.243	ENSAMXG00000035683	-	95	61.500
ENSAMXG00000039700	-	88	69.652	ENSAMXG00000039162	-	98	69.652
ENSAMXG00000039700	-	91	63.298	ENSAMXG00000036241	-	90	63.298
ENSAMXG00000039700	-	91	63.090	ENSAMXG00000004610	-	98	63.090
ENSAMXG00000039700	-	90	64.878	ENSAMXG00000010078	-	86	64.878
ENSAMXG00000039700	-	94	57.317	ENSAMXG00000038536	-	92	57.317
ENSAMXG00000039700	-	95	63.291	ENSAMXG00000039408	-	97	63.291
ENSAMXG00000039700	-	94	53.556	ENSAMXG00000029783	-	85	53.879
ENSAMXG00000039700	-	96	60.541	ENSAMXG00000012873	-	94	60.541
ENSAMXG00000039700	-	91	68.687	ENSAMXG00000037703	-	84	68.687
ENSAMXG00000039700	-	90	65.581	ENSAMXG00000010930	-	81	65.581
ENSAMXG00000039700	-	90	69.767	ENSAMXG00000039879	-	97	69.767
ENSAMXG00000039700	-	89	57.477	ENSAMXG00000043978	-	86	57.477
ENSAMXG00000039700	-	94	57.317	ENSAMXG00000042746	-	92	57.317
ENSAMXG00000039700	-	95	39.535	ENSAMXG00000035090	-	51	39.535
ENSAMXG00000039700	-	85	38.144	ENSAMXG00000044034	-	57	38.144
ENSAMXG00000039700	-	91	51.174	ENSAMXG00000012589	-	83	51.174
ENSAMXG00000039700	-	89	70.698	ENSAMXG00000009558	-	97	70.698
ENSAMXG00000039700	-	88	43.503	ENSAMXG00000035246	-	66	43.503
ENSAMXG00000039700	-	94	59.722	ENSAMXG00000039752	-	92	59.722
ENSAMXG00000039700	-	87	38.750	ENSAMXG00000001155	si:dkey-89b17.4	64	32.653
ENSAMXG00000039700	-	98	53.275	ENSAMXG00000026143	-	100	53.275
ENSAMXG00000039700	-	81	54.430	ENSAMXG00000038122	-	94	54.430
ENSAMXG00000039700	-	91	61.905	ENSAMXG00000029109	-	87	61.905
ENSAMXG00000039700	-	93	60.428	ENSAMXG00000038280	-	90	60.428
ENSAMXG00000039700	-	96	58.222	ENSAMXG00000013274	-	97	58.962
ENSAMXG00000039700	-	88	64.126	ENSAMXG00000031900	-	95	64.126
ENSAMXG00000039700	-	89	72.038	ENSAMXG00000018161	-	95	72.038
ENSAMXG00000039700	-	97	60.619	ENSAMXG00000031496	-	92	60.619
ENSAMXG00000039700	-	95	59.259	ENSAMXG00000031307	-	67	59.259
ENSAMXG00000039700	-	98	58.000	ENSAMXG00000042174	-	91	56.542
ENSAMXG00000039700	-	91	48.529	ENSAMXG00000007973	-	97	47.399
ENSAMXG00000039700	-	98	62.150	ENSAMXG00000037717	-	97	62.150
ENSAMXG00000039700	-	89	66.197	ENSAMXG00000036849	-	89	66.197
ENSAMXG00000039700	-	88	41.905	ENSAMXG00000044096	-	79	41.905
ENSAMXG00000039700	-	89	42.105	ENSAMXG00000034873	-	80	42.105
ENSAMXG00000039700	-	90	70.233	ENSAMXG00000039744	-	99	70.233
ENSAMXG00000039700	-	89	66.063	ENSAMXG00000029828	-	95	66.063
ENSAMXG00000039700	-	96	64.352	ENSAMXG00000044110	-	90	64.352
ENSAMXG00000039700	-	96	61.395	ENSAMXG00000037923	-	99	61.856
ENSAMXG00000039700	-	96	58.874	ENSAMXG00000037981	-	77	58.874
ENSAMXG00000039700	-	93	67.442	ENSAMXG00000038453	-	82	67.442
ENSAMXG00000039700	-	92	62.981	ENSAMXG00000044028	-	95	62.981
ENSAMXG00000039700	-	88	37.097	ENSAMXG00000029059	-	63	37.097
ENSAMXG00000039700	-	93	57.949	ENSAMXG00000036257	-	89	57.949
ENSAMXG00000039700	-	89	69.811	ENSAMXG00000008613	-	96	69.811
ENSAMXG00000039700	-	92	49.744	ENSAMXG00000034857	-	67	49.744
ENSAMXG00000039700	-	98	50.196	ENSAMXG00000043178	-	82	50.196
ENSAMXG00000039700	-	89	69.231	ENSAMXG00000041404	-	96	69.231
ENSAMXG00000039700	-	91	58.462	ENSAMXG00000019489	-	86	58.163
ENSAMXG00000039700	-	89	69.118	ENSAMXG00000035145	-	82	69.118
ENSAMXG00000039700	-	97	66.667	ENSAMXG00000017609	-	81	66.667
ENSAMXG00000039700	-	93	66.497	ENSAMXG00000040630	-	97	66.497
ENSAMXG00000039700	-	96	62.439	ENSAMXG00000031794	-	99	62.439
ENSAMXG00000039700	-	91	70.796	ENSAMXG00000011804	-	92	70.796
ENSAMXG00000039700	-	96	49.733	ENSAMXG00000029660	-	52	49.733
ENSAMXG00000039700	-	90	70.166	ENSAMXG00000035809	-	99	70.166
ENSAMXG00000039700	-	90	66.038	ENSAMXG00000031646	-	99	66.038
ENSAMXG00000039700	-	96	64.634	ENSAMXG00000034958	-	96	64.634
ENSAMXG00000039700	-	89	69.378	ENSAMXG00000031009	-	85	69.378
ENSAMXG00000039700	-	99	64.615	ENSAMXG00000042275	-	97	64.615
ENSAMXG00000039700	-	88	37.143	ENSAMXG00000033001	-	55	37.143
ENSAMXG00000039700	-	95	64.634	ENSAMXG00000036233	-	84	64.634
ENSAMXG00000039700	-	99	65.333	ENSAMXG00000043423	-	83	65.333
ENSAMXG00000039700	-	91	70.192	ENSAMXG00000024978	-	96	70.192
ENSAMXG00000039700	-	88	67.788	ENSAMXG00000031489	-	91	67.788
ENSAMXG00000039700	-	84	50.575	ENSAMXG00000033252	-	98	46.392
ENSAMXG00000039700	-	98	59.292	ENSAMXG00000039770	-	89	59.292
ENSAMXG00000039700	-	88	64.078	ENSAMXG00000043291	-	69	64.078
ENSAMXG00000039700	-	91	67.943	ENSAMXG00000041128	-	87	67.943
ENSAMXG00000039700	-	98	64.186	ENSAMXG00000037760	-	100	64.186
ENSAMXG00000039700	-	97	42.105	ENSAMXG00000041862	-	95	42.105
ENSAMXG00000039700	-	97	69.200	ENSAMXG00000041861	-	95	69.200
ENSAMXG00000039700	-	98	64.414	ENSAMXG00000035437	-	99	64.414
ENSAMXG00000039700	-	91	62.332	ENSAMXG00000030530	-	99	62.896
ENSAMXG00000039700	-	99	64.889	ENSAMXG00000034847	-	90	64.889
ENSAMXG00000039700	-	90	67.111	ENSAMXG00000036567	-	79	67.111
ENSAMXG00000039700	-	88	50.249	ENSAMXG00000029518	-	65	50.249
ENSAMXG00000039700	-	91	58.000	ENSAMXG00000026144	-	91	58.000
ENSAMXG00000039700	-	96	63.850	ENSAMXG00000026142	-	93	63.850
ENSAMXG00000039700	-	85	42.326	ENSAMXG00000042191	zbtb47a	70	42.326
ENSAMXG00000039700	-	85	59.788	ENSAMXG00000038905	-	87	59.788
ENSAMXG00000039700	-	95	60.633	ENSAMXG00000001626	-	99	60.633
ENSAMXG00000039700	-	89	35.897	ENSAMXG00000038235	snai2	54	35.897
ENSAMXG00000039700	-	89	61.111	ENSAMXG00000029161	-	80	61.111
ENSAMXG00000039700	-	89	68.664	ENSAMXG00000037885	-	96	68.664
ENSAMXG00000039700	-	99	59.657	ENSAMXG00000029960	-	95	59.657
ENSAMXG00000039700	-	91	51.500	ENSAMXG00000035127	-	90	51.020
ENSAMXG00000039700	-	95	55.140	ENSAMXG00000030963	-	73	55.140
ENSAMXG00000039700	-	89	65.359	ENSAMXG00000042774	-	94	65.359
ENSAMXG00000039700	-	98	45.540	ENSAMXG00000034333	-	84	49.474
ENSAMXG00000039700	-	90	51.542	ENSAMXG00000043302	-	76	51.542
ENSAMXG00000039700	-	89	66.505	ENSAMXG00000041975	-	86	66.505
ENSAMXG00000039700	-	98	60.000	ENSAMXG00000042633	-	99	60.000
ENSAMXG00000039700	-	89	68.837	ENSAMXG00000032457	-	91	68.837
ENSAMXG00000039700	-	89	64.433	ENSAMXG00000034402	-	94	64.433
ENSAMXG00000039700	-	95	61.382	ENSAMXG00000041609	-	99	61.382
ENSAMXG00000039700	-	89	67.699	ENSAMXG00000043251	-	95	67.699
ENSAMXG00000039700	-	98	59.514	ENSAMXG00000010805	-	99	60.094
ENSAMXG00000039700	-	92	67.442	ENSAMXG00000029178	-	96	67.442
ENSAMXG00000039700	-	92	64.679	ENSAMXG00000033013	-	81	64.679
ENSAMXG00000039700	-	91	59.259	ENSAMXG00000036915	-	95	62.439
ENSAMXG00000039700	-	93	65.409	ENSAMXG00000032212	-	90	65.409
ENSAMXG00000039700	-	95	68.317	ENSAMXG00000039977	-	99	68.317
ENSAMXG00000039700	-	98	63.855	ENSAMXG00000031844	-	99	63.855
ENSAMXG00000039700	-	95	56.889	ENSAMXG00000038284	-	95	56.889
ENSAMXG00000039700	-	88	67.526	ENSAMXG00000039182	-	78	67.526
ENSAMXG00000039700	-	94	62.553	ENSAMXG00000003002	-	94	62.553
ENSAMXG00000039700	-	99	60.177	ENSAMXG00000017959	-	98	60.177
ENSAMXG00000039700	-	98	53.073	ENSAMXG00000034096	-	88	53.846
ENSAMXG00000039700	-	98	69.091	ENSAMXG00000040806	-	94	69.091
ENSAMXG00000039700	-	93	38.117	ENSAMXG00000025761	-	89	37.104
ENSAMXG00000039700	-	91	61.421	ENSAMXG00000043019	-	93	61.421
ENSAMXG00000039700	-	97	61.468	ENSAMXG00000009563	-	99	61.468
ENSAMXG00000039700	-	96	43.814	ENSAMXG00000017199	-	50	43.814
ENSAMXG00000039700	-	94	65.778	ENSAMXG00000025452	-	99	65.778
ENSAMXG00000039700	-	91	71.257	ENSAMXG00000029878	-	92	71.257
ENSAMXG00000039700	-	91	64.734	ENSAMXG00000035875	-	99	64.734
ENSAMXG00000039700	-	95	44.737	ENSAMXG00000014745	-	82	45.000
ENSAMXG00000039700	-	98	62.609	ENSAMXG00000040677	-	97	62.609
ENSAMXG00000039700	-	89	69.124	ENSAMXG00000025965	-	94	69.124
ENSAMXG00000039700	-	91	66.505	ENSAMXG00000041865	-	97	66.505
ENSAMXG00000039700	-	89	38.220	ENSAMXG00000039622	zbtb41	51	38.220
ENSAMXG00000039700	-	93	53.521	ENSAMXG00000030659	-	79	53.521
ENSAMXG00000039700	-	90	56.744	ENSAMXG00000012604	-	96	56.744
ENSAMXG00000039700	-	98	58.730	ENSAMXG00000041721	-	77	59.921
ENSAMXG00000039700	-	93	65.534	ENSAMXG00000041725	-	97	65.534
ENSAMXG00000039700	-	88	70.673	ENSAMXG00000000353	-	93	70.673
ENSAMXG00000039700	-	92	57.209	ENSAMXG00000036633	-	68	59.389
ENSAMXG00000039700	-	96	60.177	ENSAMXG00000037143	-	95	60.500
ENSAMXG00000039700	-	93	67.164	ENSAMXG00000039016	-	81	67.164
ENSAMXG00000039700	-	89	66.222	ENSAMXG00000035949	-	79	66.222
ENSAMXG00000039700	-	94	31.658	ENSAMXG00000016921	znf341	51	31.658
ENSAMXG00000039700	-	90	69.712	ENSAMXG00000036762	-	96	69.712
ENSAMXG00000039700	-	98	62.931	ENSAMXG00000032841	-	85	62.931
ENSAMXG00000039700	-	93	61.207	ENSAMXG00000042167	-	97	61.207
ENSAMXG00000039700	-	91	56.652	ENSAMXG00000034344	-	74	57.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039700	-	96	47.907	ENSATEG00000010859	-	89	47.549	Anabas_testudineus
ENSAMXG00000039700	-	89	48.276	ENSCPBG00000009849	-	83	48.276	Chrysemys_picta_bellii
ENSAMXG00000039700	-	99	50.806	ENSELUG00000009575	-	99	55.752	Esox_lucius
ENSAMXG00000039700	-	89	60.526	ENSIPUG00000015121	-	56	61.765	Ictalurus_punctatus
ENSAMXG00000039700	-	93	46.951	ENSKMAG00000000543	-	98	46.009	Kryptolebias_marmoratus
ENSAMXG00000039700	-	89	46.602	ENSMAMG00000016519	-	88	42.194	Mastacembelus_armatus
ENSAMXG00000039700	-	97	51.174	ENSMZEG00005020574	-	86	51.174	Maylandia_zebra
ENSAMXG00000039700	-	92	46.354	ENSONIG00000007088	-	100	46.354	Oreochromis_niloticus
ENSAMXG00000039700	-	97	56.186	ENSPSIG00000000075	-	73	56.186	Pelodiscus_sinensis
ENSAMXG00000039700	-	92	62.150	ENSPNAG00000008480	-	89	62.150	Pygocentrus_nattereri
ENSAMXG00000039700	-	99	67.513	ENSPNAG00000012215	-	93	67.513	Pygocentrus_nattereri
ENSAMXG00000039700	-	95	43.925	ENSSMAG00000007396	-	84	43.925	Scophthalmus_maximus
ENSAMXG00000039700	-	94	55.670	ENSTBEG00000012287	-	99	55.670	Tupaia_belangeri