EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000039828 (Gene tree)
Gene ID: -
Gene Symbol: npm3
Alias: cb581|fb75f02|sb:cb581|wu:fb75f02|zgc:113084
Full Name: nucleoplasmin-like protein NO29
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4701 bases
Position: chrAPWO02000071.1:21-4721
Accession: 103023053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000047536	Nucleoplasmin	PF03066.15	2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000056665	-	1556	XM_022666648	ENSAMXP00000047536	194 (aa)	XP_022522369	-

Gene Model

Click here to download ENSAMXG00000039828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000039828	npm3	53	40.777	ENSAMXG00000038475	npm2b	53	42.308
ENSAMXG00000039828	npm3	52	42.000	ENSAMXG00000001084	npm2a	66	42.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039828	npm3	56	55.046	ENSG00000107833	NPM3	60	55.660	Homo_sapiens
ENSAMXG00000039828	npm3	57	84.545	ENSAPOG00000013083	npm3	66	85.185	Acanthochromis_polyacanthus
ENSAMXG00000039828	npm3	53	48.544	ENSAMEG00000019414	-	61	48.544	Ailuropoda_melanoleuca
ENSAMXG00000039828	npm3	54	56.731	ENSAMEG00000017639	-	60	55.660	Ailuropoda_melanoleuca
ENSAMXG00000039828	npm3	54	83.019	ENSACIG00000022586	npm3	66	83.019	Amphilophus_citrinellus
ENSAMXG00000039828	npm3	57	84.545	ENSAOCG00000009376	npm3	67	85.185	Amphiprion_ocellaris
ENSAMXG00000039828	npm3	57	84.545	ENSAPEG00000015863	npm3	67	85.185	Amphiprion_percula
ENSAMXG00000039828	npm3	57	85.455	ENSATEG00000022752	npm3	66	86.111	Anabas_testudineus
ENSAMXG00000039828	npm3	50	55.670	ENSAPLG00000010935	NPM3	64	54.545	Anas_platyrhynchos
ENSAMXG00000039828	npm3	53	55.340	ENSACAG00000011936	NPM3	62	55.340	Anolis_carolinensis
ENSAMXG00000039828	npm3	50	52.577	ENSANAG00000033290	-	58	52.577	Aotus_nancymaae
ENSAMXG00000039828	npm3	56	55.046	ENSANAG00000027082	-	60	55.660	Aotus_nancymaae
ENSAMXG00000039828	npm3	62	48.760	ENSANAG00000023070	-	66	53.846	Aotus_nancymaae
ENSAMXG00000039828	npm3	57	84.545	ENSACLG00000007854	npm3	67	85.185	Astatotilapia_calliptera
ENSAMXG00000039828	npm3	54	56.731	ENSBTAG00000016335	NPM3	59	56.731	Bos_taurus
ENSAMXG00000039828	npm3	56	55.046	ENSCJAG00000017650	NPM3	60	55.660	Callithrix_jacchus
ENSAMXG00000039828	npm3	54	56.731	ENSCAFG00000009919	NPM3	52	55.660	Canis_familiaris
ENSAMXG00000039828	npm3	54	56.731	ENSCAFG00020009185	NPM3	60	55.660	Canis_lupus_dingo
ENSAMXG00000039828	npm3	54	56.731	ENSCHIG00000024055	-	59	56.731	Capra_hircus
ENSAMXG00000039828	npm3	74	35.862	ENSCHIG00000016052	-	58	40.594	Capra_hircus
ENSAMXG00000039828	npm3	54	58.654	ENSCPOG00000006301	NPM3	62	57.547	Cavia_porcellus
ENSAMXG00000039828	npm3	51	52.525	ENSCCAG00000029457	-	55	51.485	Cebus_capucinus
ENSAMXG00000039828	npm3	56	55.046	ENSCCAG00000031043	-	60	55.660	Cebus_capucinus
ENSAMXG00000039828	npm3	56	55.046	ENSCATG00000013755	NPM3	60	55.660	Cercocebus_atys
ENSAMXG00000039828	npm3	56	55.046	ENSCSAG00000005509	NPM3	60	55.660	Chlorocebus_sabaeus
ENSAMXG00000039828	npm3	58	52.212	ENSCPBG00000003817	NPM3	66	53.846	Chrysemys_picta_bellii
ENSAMXG00000039828	npm3	59	54.310	ENSCANG00000020300	NPM3	60	55.660	Colobus_angolensis_palliatus
ENSAMXG00000039828	npm3	54	57.692	ENSCGRG00001013345	Npm3	61	56.604	Cricetulus_griseus_chok1gshd
ENSAMXG00000039828	npm3	64	50.806	ENSCGRG00000015351	Npm3	61	58.586	Cricetulus_griseus_crigri
ENSAMXG00000039828	npm3	57	74.359	ENSCSEG00000007944	npm3	68	79.130	Cynoglossus_semilaevis
ENSAMXG00000039828	npm3	62	71.545	ENSCVAG00000003305	npm3	67	78.378	Cyprinodon_variegatus
ENSAMXG00000039828	npm3	56	89.908	ENSDARG00000103594	npm3	66	89.815	Danio_rerio
ENSAMXG00000039828	npm3	58	51.786	ENSDORG00000003491	Npm3	60	53.774	Dipodomys_ordii
ENSAMXG00000039828	npm3	61	49.606	ENSETEG00000006307	NPM3	60	53.774	Echinops_telfairi
ENSAMXG00000039828	npm3	57	54.054	ENSEASG00005008834	NPM3	60	55.660	Equus_asinus_asinus
ENSAMXG00000039828	npm3	57	54.054	ENSECAG00000007524	NPM3	60	55.660	Equus_caballus
ENSAMXG00000039828	npm3	57	86.364	ENSELUG00000021730	npm3	67	87.037	Esox_lucius
ENSAMXG00000039828	npm3	54	55.769	ENSFCAG00000007178	NPM3	60	54.717	Felis_catus
ENSAMXG00000039828	npm3	57	50.909	ENSFALG00000008586	NPM3	63	54.000	Ficedula_albicollis
ENSAMXG00000039828	npm3	54	46.154	ENSFDAG00000016537	NPM3	66	62.319	Fukomys_damarensis
ENSAMXG00000039828	npm3	57	79.279	ENSFHEG00000003983	npm3	69	80.556	Fundulus_heteroclitus
ENSAMXG00000039828	npm3	56	80.734	ENSGMOG00000004317	npm3	70	82.243	Gadus_morhua
ENSAMXG00000039828	npm3	53	52.941	ENSGALG00000032329	NPM3	70	51.923	Gallus_gallus
ENSAMXG00000039828	npm3	59	77.391	ENSGAFG00000009135	npm3	66	81.308	Gambusia_affinis
ENSAMXG00000039828	npm3	57	83.636	ENSGACG00000007294	npm3	63	84.259	Gasterosteus_aculeatus
ENSAMXG00000039828	npm3	55	52.830	ENSGAGG00000004081	NPM3	57	53.535	Gopherus_agassizii
ENSAMXG00000039828	npm3	56	55.046	ENSGGOG00000027500	NPM3	60	55.660	Gorilla_gorilla
ENSAMXG00000039828	npm3	57	83.636	ENSHBUG00000023704	npm3	68	84.259	Haplochromis_burtoni
ENSAMXG00000039828	npm3	66	49.612	ENSHGLG00000019118	NPM3	62	57.692	Heterocephalus_glaber_female
ENSAMXG00000039828	npm3	63	50.820	ENSHGLG00100010926	NPM3	76	59.794	Heterocephalus_glaber_male
ENSAMXG00000039828	npm3	57	77.477	ENSHCOG00000019322	npm3	64	77.064	Hippocampus_comes
ENSAMXG00000039828	npm3	57	93.636	ENSIPUG00000008204	npm3	69	95.370	Ictalurus_punctatus
ENSAMXG00000039828	npm3	54	56.731	ENSSTOG00000022621	NPM3	60	55.660	Ictidomys_tridecemlineatus
ENSAMXG00000039828	npm3	54	57.692	ENSJJAG00000018907	Npm3	60	56.604	Jaculus_jaculus
ENSAMXG00000039828	npm3	57	81.818	ENSKMAG00000020800	npm3	64	82.407	Kryptolebias_marmoratus
ENSAMXG00000039828	npm3	57	84.545	ENSLBEG00000015651	npm3	67	85.185	Labrus_bergylta
ENSAMXG00000039828	npm3	57	80.909	ENSLOCG00000000705	-	68	80.556	Lepisosteus_oculatus
ENSAMXG00000039828	npm3	63	50.000	ENSLAFG00000023022	NPM3	64	56.731	Loxodonta_africana
ENSAMXG00000039828	npm3	56	55.046	ENSMFAG00000041878	NPM3	60	55.660	Macaca_fascicularis
ENSAMXG00000039828	npm3	56	55.046	ENSMMUG00000015774	NPM3	60	55.660	Macaca_mulatta
ENSAMXG00000039828	npm3	56	55.046	ENSMNEG00000039999	NPM3	60	55.660	Macaca_nemestrina
ENSAMXG00000039828	npm3	56	55.046	ENSMLEG00000038129	NPM3	60	55.660	Mandrillus_leucophaeus
ENSAMXG00000039828	npm3	57	83.636	ENSMAMG00000002698	npm3	66	84.259	Mastacembelus_armatus
ENSAMXG00000039828	npm3	57	84.545	ENSMZEG00005003091	npm3	67	85.185	Maylandia_zebra
ENSAMXG00000039828	npm3	54	56.731	ENSMAUG00000015218	Npm3	60	55.660	Mesocricetus_auratus
ENSAMXG00000039828	npm3	54	56.731	ENSMICG00000044119	NPM3	60	55.660	Microcebus_murinus
ENSAMXG00000039828	npm3	54	55.769	ENSMOCG00000013601	Npm3	62	54.717	Microtus_ochrogaster
ENSAMXG00000039828	npm3	57	83.636	ENSMMOG00000010681	npm3	67	84.259	Mola_mola
ENSAMXG00000039828	npm3	76	46.980	ENSMODG00000011689	NPM3	59	56.731	Monodelphis_domestica
ENSAMXG00000039828	npm3	57	78.571	ENSMALG00000016787	npm3	65	79.091	Monopterus_albus
ENSAMXG00000039828	npm3	54	54.808	MGP_CAROLIEiJ_G0023020	Npm3	61	53.774	Mus_caroli
ENSAMXG00000039828	npm3	54	53.846	ENSMUSG00000056209	Npm3	61	52.830	Mus_musculus
ENSAMXG00000039828	npm3	54	54.808	MGP_PahariEiJ_G0014510	Npm3	61	53.774	Mus_pahari
ENSAMXG00000039828	npm3	57	53.153	MGP_SPRETEiJ_G0023941	Npm3	61	53.774	Mus_spretus
ENSAMXG00000039828	npm3	54	56.731	ENSMPUG00000016894	NPM3	60	55.660	Mustela_putorius_furo
ENSAMXG00000039828	npm3	54	55.769	ENSMLUG00000004961	NPM3	60	54.717	Myotis_lucifugus
ENSAMXG00000039828	npm3	71	44.526	ENSNGAG00000000155	-	63	52.885	Nannospalax_galili
ENSAMXG00000039828	npm3	57	54.054	ENSNGAG00000022833	-	60	54.717	Nannospalax_galili
ENSAMXG00000039828	npm3	56	53.211	ENSNLEG00000018637	-	60	52.830	Nomascus_leucogenys
ENSAMXG00000039828	npm3	56	55.046	ENSNLEG00000029281	-	60	55.660	Nomascus_leucogenys
ENSAMXG00000039828	npm3	54	58.654	ENSMEUG00000003465	-	75	58.654	Notamacropus_eugenii
ENSAMXG00000039828	npm3	50	47.423	ENSMEUG00000002619	-	98	47.423	Notamacropus_eugenii
ENSAMXG00000039828	npm3	54	55.769	ENSOPRG00000009229	NPM3	60	54.717	Ochotona_princeps
ENSAMXG00000039828	npm3	70	46.667	ENSODEG00000006704	NPM3	81	46.667	Octodon_degus
ENSAMXG00000039828	npm3	57	75.000	ENSONIG00000009513	npm3	67	81.818	Oreochromis_niloticus
ENSAMXG00000039828	npm3	54	56.731	ENSOCUG00000016819	NPM3	60	55.660	Oryctolagus_cuniculus
ENSAMXG00000039828	npm3	62	73.333	ENSORLG00000008492	npm3	77	78.704	Oryzias_latipes
ENSAMXG00000039828	npm3	62	73.333	ENSORLG00020002450	npm3	72	78.704	Oryzias_latipes_hni
ENSAMXG00000039828	npm3	57	78.182	ENSORLG00015006856	npm3	68	78.704	Oryzias_latipes_hsok
ENSAMXG00000039828	npm3	60	76.724	ENSOMEG00000002666	npm3	67	80.556	Oryzias_melastigma
ENSAMXG00000039828	npm3	54	56.731	ENSOGAG00000010001	NPM3	60	55.660	Otolemur_garnettii
ENSAMXG00000039828	npm3	54	56.731	ENSOARG00000016916	NPM3	59	56.731	Ovis_aries
ENSAMXG00000039828	npm3	56	55.046	ENSPPAG00000040517	NPM3	60	55.660	Pan_paniscus
ENSAMXG00000039828	npm3	54	55.769	ENSPPRG00000012611	-	60	54.717	Panthera_pardus
ENSAMXG00000039828	npm3	54	55.769	ENSPTIG00000005390	NPM3	60	54.717	Panthera_tigris_altaica
ENSAMXG00000039828	npm3	56	55.046	ENSPTRG00000002875	NPM3	60	55.660	Pan_troglodytes
ENSAMXG00000039828	npm3	56	55.046	ENSPANG00000021046	NPM3	60	55.660	Papio_anubis
ENSAMXG00000039828	npm3	61	67.797	ENSPKIG00000007609	npm3	59	71.560	Paramormyrops_kingsleyae
ENSAMXG00000039828	npm3	55	79.245	ENSPMGG00000020204	npm3	66	77.778	Periophthalmus_magnuspinnatus
ENSAMXG00000039828	npm3	54	55.769	ENSPEMG00000007731	Npm3	60	54.717	Peromyscus_maniculatus_bairdii
ENSAMXG00000039828	npm3	58	81.416	ENSPFOG00000014692	npm3	66	85.047	Poecilia_formosa
ENSAMXG00000039828	npm3	58	81.416	ENSPLAG00000009956	npm3	66	85.047	Poecilia_latipinna
ENSAMXG00000039828	npm3	52	87.000	ENSPMEG00000011795	npm3	67	87.000	Poecilia_mexicana
ENSAMXG00000039828	npm3	56	83.486	ENSPREG00000020765	npm3	66	84.259	Poecilia_reticulata
ENSAMXG00000039828	npm3	56	55.046	ENSPPYG00000002589	NPM3	51	55.660	Pongo_abelii
ENSAMXG00000039828	npm3	54	56.731	ENSPCOG00000014704	NPM3	60	55.660	Propithecus_coquereli
ENSAMXG00000039828	npm3	57	54.054	ENSPVAG00000004038	NPM3	60	55.660	Pteropus_vampyrus
ENSAMXG00000039828	npm3	57	83.636	ENSPNYG00000009300	npm3	67	84.259	Pundamilia_nyererei
ENSAMXG00000039828	npm3	56	94.495	ENSPNAG00000014779	npm3	69	94.444	Pygocentrus_nattereri
ENSAMXG00000039828	npm3	61	50.394	ENSRNOG00000017622	Npm3	60	55.769	Rattus_norvegicus
ENSAMXG00000039828	npm3	65	50.000	ENSRBIG00000042048	-	62	57.576	Rhinopithecus_bieti
ENSAMXG00000039828	npm3	56	55.046	ENSRBIG00000039086	-	60	55.660	Rhinopithecus_bieti
ENSAMXG00000039828	npm3	56	55.046	ENSRROG00000029912	NPM3	60	55.660	Rhinopithecus_roxellana
ENSAMXG00000039828	npm3	56	55.046	ENSSBOG00000027661	NPM3	62	55.660	Saimiri_boliviensis_boliviensis
ENSAMXG00000039828	npm3	58	51.327	ENSSHAG00000008567	NPM3	61	51.887	Sarcophilus_harrisii
ENSAMXG00000039828	npm3	57	83.636	ENSSFOG00015013651	npm3	67	84.906	Scleropages_formosus
ENSAMXG00000039828	npm3	57	83.636	ENSSMAG00000003907	npm3	68	84.259	Scophthalmus_maximus
ENSAMXG00000039828	npm3	57	87.273	ENSSDUG00000022843	npm3	67	87.963	Seriola_dumerili
ENSAMXG00000039828	npm3	57	87.273	ENSSLDG00000002811	npm3	67	87.963	Seriola_lalandi_dorsalis
ENSAMXG00000039828	npm3	53	51.429	ENSSPUG00000011875	NPM3	67	50.467	Sphenodon_punctatus
ENSAMXG00000039828	npm3	57	85.455	ENSSPAG00000002553	npm3	67	86.111	Stegastes_partitus
ENSAMXG00000039828	npm3	56	53.211	ENSSSCG00000010568	NPM3	60	53.774	Sus_scrofa
ENSAMXG00000039828	npm3	61	50.420	ENSTGUG00000009948	NPM3	77	54.902	Taeniopygia_guttata
ENSAMXG00000039828	npm3	58	83.929	ENSTRUG00000011661	npm3	68	86.111	Takifugu_rubripes
ENSAMXG00000039828	npm3	62	77.686	ENSTNIG00000016518	npm3	61	85.981	Tetraodon_nigroviridis
ENSAMXG00000039828	npm3	54	56.731	ENSVPAG00000003120	NPM3	60	55.660	Vicugna_pacos
ENSAMXG00000039828	npm3	54	56.731	ENSVVUG00000000945	NPM3	52	55.660	Vulpes_vulpes
ENSAMXG00000039828	npm3	55	59.434	ENSXETG00000014472	npm3	62	59.434	Xenopus_tropicalis
ENSAMXG00000039828	npm3	58	78.761	ENSXCOG00000012121	npm3	64	83.178	Xiphophorus_couchianus
ENSAMXG00000039828	npm3	58	78.761	ENSXMAG00000013473	npm3	64	83.178	Xiphophorus_maculatus