EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000039891 (Gene tree)
Gene ID: 103021739
Gene Symbol: si:ch1073-296d18.1
Alias: -
Full Name: uncharacterized LOC103021739
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 16323 bases
Position: chr23:11526024-11542346
Accession: 103021739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045261	PARP	PF00644.20	9.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055856	-	4621	XM_022683422	ENSAMXP00000045261	1104 (aa)	XP_022539143	-

Gene Model

Click here to download ENSAMXG00000039891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039891	si:ch1073-296d18.1	91	43.919	ENSAPOG00000016910	si:ch1073-296d18.1	90	45.121	Acanthochromis_polyacanthus
ENSAMXG00000039891	si:ch1073-296d18.1	65	70.352	ENSAOCG00000007023	-	99	70.352	Amphiprion_ocellaris
ENSAMXG00000039891	si:ch1073-296d18.1	56	52.038	ENSAPEG00000005731	si:ch1073-296d18.1	99	52.351	Amphiprion_percula
ENSAMXG00000039891	si:ch1073-296d18.1	92	43.202	ENSATEG00000011078	si:ch1073-296d18.1	91	43.558	Anabas_testudineus
ENSAMXG00000039891	si:ch1073-296d18.1	50	47.312	ENSANAG00000037218	PARP10	78	47.312	Aotus_nancymaae
ENSAMXG00000039891	si:ch1073-296d18.1	63	74.176	ENSACLG00000012196	-	99	74.176	Astatotilapia_calliptera
ENSAMXG00000039891	si:ch1073-296d18.1	64	47.549	ENSCPOG00000014235	PARP10	69	47.549	Cavia_porcellus
ENSAMXG00000039891	si:ch1073-296d18.1	50	48.352	ENSCCAG00000024610	PARP10	73	48.352	Cebus_capucinus
ENSAMXG00000039891	si:ch1073-296d18.1	57	50.273	ENSCATG00000025822	PARP10	59	50.273	Cercocebus_atys
ENSAMXG00000039891	si:ch1073-296d18.1	57	50.273	ENSCSAG00000008843	PARP10	71	50.273	Chlorocebus_sabaeus
ENSAMXG00000039891	si:ch1073-296d18.1	81	35.911	ENSCPBG00000004075	PARP10	94	35.911	Chrysemys_picta_bellii
ENSAMXG00000039891	si:ch1073-296d18.1	57	50.273	ENSCANG00000043564	PARP10	71	50.273	Colobus_angolensis_palliatus
ENSAMXG00000039891	si:ch1073-296d18.1	62	72.000	ENSCVAG00000014098	-	99	72.000	Cyprinodon_variegatus
ENSAMXG00000039891	si:ch1073-296d18.1	99	53.764	ENSDARG00000087145	si:ch1073-296d18.1	99	62.521	Danio_rerio
ENSAMXG00000039891	si:ch1073-296d18.1	50	44.624	ENSDNOG00000046110	PARP10	52	44.624	Dasypus_novemcinctus
ENSAMXG00000039891	si:ch1073-296d18.1	50	45.355	ENSEEUG00000005507	PARP10	55	45.355	Erinaceus_europaeus
ENSAMXG00000039891	si:ch1073-296d18.1	99	48.819	ENSELUG00000001455	si:ch1073-296d18.1	92	48.819	Esox_lucius
ENSAMXG00000039891	si:ch1073-296d18.1	67	64.500	ENSGMOG00000000853	si:ch1073-296d18.1	77	64.500	Gadus_morhua
ENSAMXG00000039891	si:ch1073-296d18.1	70	70.466	ENSGACG00000008798	si:ch1073-296d18.1	75	70.466	Gasterosteus_aculeatus
ENSAMXG00000039891	si:ch1073-296d18.1	61	50.820	ENSHGLG00000010423	PARP10	62	50.820	Heterocephalus_glaber_female
ENSAMXG00000039891	si:ch1073-296d18.1	99	55.506	ENSIPUG00000011187	parp10	91	55.466	Ictalurus_punctatus
ENSAMXG00000039891	si:ch1073-296d18.1	62	51.934	ENSJJAG00000017801	Parp10	78	51.934	Jaculus_jaculus
ENSAMXG00000039891	si:ch1073-296d18.1	100	45.785	ENSKMAG00000002066	si:ch1073-296d18.1	91	45.785	Kryptolebias_marmoratus
ENSAMXG00000039891	si:ch1073-296d18.1	51	74.332	ENSLBEG00000003798	si:ch1073-296d18.1	94	74.332	Labrus_bergylta
ENSAMXG00000039891	si:ch1073-296d18.1	69	43.137	ENSLACG00000008645	PARP10	79	43.137	Latimeria_chalumnae
ENSAMXG00000039891	si:ch1073-296d18.1	90	72.821	ENSLOCG00000008505	si:ch1073-296d18.1	86	72.821	Lepisosteus_oculatus
ENSAMXG00000039891	si:ch1073-296d18.1	52	52.381	ENSMLEG00000024662	PARP10	70	52.381	Mandrillus_leucophaeus
ENSAMXG00000039891	si:ch1073-296d18.1	89	45.059	ENSMAMG00000003770	si:ch1073-296d18.1	98	45.553	Mastacembelus_armatus
ENSAMXG00000039891	si:ch1073-296d18.1	50	53.514	ENSMOCG00000000179	Parp10	66	53.514	Microtus_ochrogaster
ENSAMXG00000039891	si:ch1073-296d18.1	64	48.108	ENSMODG00000010393	-	78	48.108	Monodelphis_domestica
ENSAMXG00000039891	si:ch1073-296d18.1	50	52.432	MGP_CAROLIEiJ_G0019914	Parp10	95	58.095	Mus_caroli
ENSAMXG00000039891	si:ch1073-296d18.1	50	52.973	ENSMUSG00000063268	Parp10	95	58.095	Mus_musculus
ENSAMXG00000039891	si:ch1073-296d18.1	50	52.973	MGP_SPRETEiJ_G0020817	Parp10	95	58.095	Mus_spretus
ENSAMXG00000039891	si:ch1073-296d18.1	85	71.859	ENSNBRG00000000940	si:ch1073-296d18.1	91	71.859	Neolamprologus_brichardi
ENSAMXG00000039891	si:ch1073-296d18.1	74	73.000	ENSONIG00000007669	si:ch1073-296d18.1	84	73.000	Oreochromis_niloticus
ENSAMXG00000039891	si:ch1073-296d18.1	97	43.738	ENSORLG00015010006	si:ch1073-296d18.1	98	43.738	Oryzias_latipes_hsok
ENSAMXG00000039891	si:ch1073-296d18.1	91	41.447	ENSOMEG00000011731	si:ch1073-296d18.1	91	41.447	Oryzias_melastigma
ENSAMXG00000039891	si:ch1073-296d18.1	57	50.820	ENSPANG00000023348	PARP10	70	50.820	Papio_anubis
ENSAMXG00000039891	si:ch1073-296d18.1	85	71.154	ENSPFOG00000013067	si:ch1073-296d18.1	88	71.154	Poecilia_formosa
ENSAMXG00000039891	si:ch1073-296d18.1	54	73.232	ENSPLAG00000022710	-	87	73.232	Poecilia_latipinna
ENSAMXG00000039891	si:ch1073-296d18.1	54	73.232	ENSPMEG00000019504	-	86	73.232	Poecilia_mexicana
ENSAMXG00000039891	si:ch1073-296d18.1	50	50.538	ENSPCAG00000001115	PARP10	61	50.538	Procavia_capensis
ENSAMXG00000039891	si:ch1073-296d18.1	61	48.387	ENSPCOG00000028616	PARP10	75	48.387	Propithecus_coquereli
ENSAMXG00000039891	si:ch1073-296d18.1	63	66.484	ENSPNYG00000005086	-	99	66.484	Pundamilia_nyererei
ENSAMXG00000039891	si:ch1073-296d18.1	99	72.963	ENSPNAG00000024484	si:ch1073-296d18.1	92	73.232	Pygocentrus_nattereri
ENSAMXG00000039891	si:ch1073-296d18.1	57	50.820	ENSRBIG00000040506	PARP10	73	50.820	Rhinopithecus_bieti
ENSAMXG00000039891	si:ch1073-296d18.1	57	50.273	ENSRROG00000039086	PARP10	71	50.273	Rhinopithecus_roxellana
ENSAMXG00000039891	si:ch1073-296d18.1	53	52.736	ENSSMAG00000020545	-	99	52.736	Scophthalmus_maximus
ENSAMXG00000039891	si:ch1073-296d18.1	61	66.210	ENSSLDG00000003545	-	99	66.210	Seriola_lalandi_dorsalis
ENSAMXG00000039891	si:ch1073-296d18.1	61	68.317	ENSSPAG00000005439	-	99	68.317	Stegastes_partitus
ENSAMXG00000039891	si:ch1073-296d18.1	85	45.775	ENSTNIG00000014023	si:ch1073-296d18.1	83	45.775	Tetraodon_nigroviridis
ENSAMXG00000039891	si:ch1073-296d18.1	57	49.462	ENSTTRG00000006314	PARP10	77	49.462	Tursiops_truncatus
ENSAMXG00000039891	si:ch1073-296d18.1	54	72.727	ENSXCOG00000003615	-	87	72.727	Xiphophorus_couchianus
ENSAMXG00000039891	si:ch1073-296d18.1	54	72.727	ENSXMAG00000025112	-	86	72.727	Xiphophorus_maculatus