EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000039954 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2349 bases
Position: chrAPWO02000099.1:149628-151976
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048371	RVT_1	PF00078.27	7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032297	-	2349	-	ENSAMXP00000048371	782 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000039954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000039954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000039954	-	53	33.333	ENSAMXG00000036492	-	88	33.333
ENSAMXG00000039954	-	76	30.569	ENSAMXG00000041658	-	70	30.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000039954	-	100	81.330	ENSATEG00000020292	-	74	81.330	Anabas_testudineus
ENSAMXG00000039954	-	96	79.443	ENSATEG00000009553	-	72	79.443	Anabas_testudineus
ENSAMXG00000039954	-	100	81.202	ENSATEG00000014941	-	79	81.202	Anabas_testudineus
ENSAMXG00000039954	-	100	81.586	ENSATEG00000014211	-	88	81.586	Anabas_testudineus
ENSAMXG00000039954	-	100	81.586	ENSATEG00000010056	-	74	81.586	Anabas_testudineus
ENSAMXG00000039954	-	87	81.579	ENSATEG00000009235	-	71	81.579	Anabas_testudineus
ENSAMXG00000039954	-	91	81.538	ENSATEG00000014139	-	72	81.538	Anabas_testudineus
ENSAMXG00000039954	-	97	81.722	ENSATEG00000024954	-	73	81.722	Anabas_testudineus
ENSAMXG00000039954	-	100	81.586	ENSATEG00000023604	-	74	81.586	Anabas_testudineus
ENSAMXG00000039954	-	100	81.586	ENSATEG00000017504	-	74	81.586	Anabas_testudineus
ENSAMXG00000039954	-	59	84.565	ENSACLG00000005592	-	94	84.565	Astatotilapia_calliptera
ENSAMXG00000039954	-	62	84.221	ENSACLG00000001165	-	95	84.221	Astatotilapia_calliptera
ENSAMXG00000039954	-	74	81.411	ENSACLG00000019356	-	99	81.411	Astatotilapia_calliptera
ENSAMXG00000039954	-	74	82.100	ENSACLG00000018836	-	99	82.100	Astatotilapia_calliptera
ENSAMXG00000039954	-	96	79.388	ENSACLG00000000593	-	86	79.388	Astatotilapia_calliptera
ENSAMXG00000039954	-	58	66.009	ENSELUG00000020034	-	96	66.009	Esox_lucius
ENSAMXG00000039954	-	63	83.232	ENSELUG00000024014	-	99	83.232	Esox_lucius
ENSAMXG00000039954	-	62	72.485	ENSELUG00000008022	-	99	72.255	Esox_lucius
ENSAMXG00000039954	-	50	78.974	ENSMAMG00000023382	-	96	78.974	Mastacembelus_armatus
ENSAMXG00000039954	-	98	35.404	ENSORLG00000028947	-	82	35.404	Oryzias_latipes
ENSAMXG00000039954	-	60	79.229	ENSORLG00000029299	-	99	79.229	Oryzias_latipes
ENSAMXG00000039954	-	98	35.155	ENSORLG00000030217	-	94	35.155	Oryzias_latipes
ENSAMXG00000039954	-	74	80.551	ENSORLG00000027144	-	100	80.551	Oryzias_latipes
ENSAMXG00000039954	-	59	32.618	ENSORLG00000029093	-	82	33.500	Oryzias_latipes
ENSAMXG00000039954	-	98	35.404	ENSORLG00000029318	-	82	35.404	Oryzias_latipes
ENSAMXG00000039954	-	98	80.000	ENSORLG00000029262	-	99	80.000	Oryzias_latipes
ENSAMXG00000039954	-	51	71.106	ENSORLG00000029683	-	97	71.106	Oryzias_latipes
ENSAMXG00000039954	-	100	80.946	ENSORLG00000029966	-	100	80.946	Oryzias_latipes
ENSAMXG00000039954	-	98	35.280	ENSORLG00000028726	-	94	35.280	Oryzias_latipes
ENSAMXG00000039954	-	100	80.946	ENSORLG00000025024	-	74	80.946	Oryzias_latipes
ENSAMXG00000039954	-	55	78.454	ENSORLG00000026257	-	100	78.454	Oryzias_latipes
ENSAMXG00000039954	-	100	80.563	ENSORLG00000029282	-	89	80.563	Oryzias_latipes
ENSAMXG00000039954	-	98	35.411	ENSORLG00000028029	-	82	35.411	Oryzias_latipes
ENSAMXG00000039954	-	100	80.051	ENSORLG00020009508	-	74	80.051	Oryzias_latipes_hni
ENSAMXG00000039954	-	52	31.796	ENSORLG00020016970	-	99	31.630	Oryzias_latipes_hni
ENSAMXG00000039954	-	98	35.162	ENSORLG00020009614	-	78	35.224	Oryzias_latipes_hni
ENSAMXG00000039954	-	88	35.556	ENSORLG00020002875	-	80	35.405	Oryzias_latipes_hni
ENSAMXG00000039954	-	74	80.551	ENSORLG00020018851	-	100	80.551	Oryzias_latipes_hni
ENSAMXG00000039954	-	100	79.923	ENSORLG00020001879	-	100	79.923	Oryzias_latipes_hni
ENSAMXG00000039954	-	94	35.854	ENSORLG00020020316	-	78	35.505	Oryzias_latipes_hni
ENSAMXG00000039954	-	74	80.551	ENSORLG00015020439	-	100	80.551	Oryzias_latipes_hsok
ENSAMXG00000039954	-	54	76.706	ENSORLG00015011242	-	96	76.706	Oryzias_latipes_hsok
ENSAMXG00000039954	-	57	37.632	ENSORLG00015016973	-	99	37.632	Oryzias_latipes_hsok
ENSAMXG00000039954	-	64	79.518	ENSORLG00015008483	-	100	79.518	Oryzias_latipes_hsok
ENSAMXG00000039954	-	68	37.589	ENSORLG00015005190	-	99	37.589	Oryzias_latipes_hsok
ENSAMXG00000039954	-	87	35.229	ENSORLG00015000605	-	81	35.229	Oryzias_latipes_hsok
ENSAMXG00000039954	-	69	79.444	ENSORLG00015011987	-	100	79.444	Oryzias_latipes_hsok
ENSAMXG00000039954	-	100	80.179	ENSOMEG00000016368	-	100	80.179	Oryzias_melastigma
ENSAMXG00000039954	-	100	80.051	ENSOMEG00000019233	-	100	80.051	Oryzias_melastigma
ENSAMXG00000039954	-	100	80.051	ENSOMEG00000013646	-	100	80.051	Oryzias_melastigma
ENSAMXG00000039954	-	74	79.690	ENSOMEG00000019854	-	100	79.690	Oryzias_melastigma
ENSAMXG00000039954	-	100	79.795	ENSOMEG00000000581	-	74	79.795	Oryzias_melastigma
ENSAMXG00000039954	-	74	80.034	ENSOMEG00000022295	-	100	80.034	Oryzias_melastigma
ENSAMXG00000039954	-	100	80.179	ENSOMEG00000007004	-	74	80.179	Oryzias_melastigma
ENSAMXG00000039954	-	96	79.760	ENSOMEG00000010058	-	73	79.760	Oryzias_melastigma
ENSAMXG00000039954	-	53	85.082	ENSPREG00000009633	-	88	85.082	Poecilia_reticulata
ENSAMXG00000039954	-	100	81.714	ENSSFOG00015021945	-	72	81.714	Scleropages_formosus
ENSAMXG00000039954	-	96	82.290	ENSSFOG00015014529	-	76	82.290	Scleropages_formosus
ENSAMXG00000039954	-	93	81.215	ENSSFOG00015004005	-	71	81.215	Scleropages_formosus
ENSAMXG00000039954	-	100	80.946	ENSSFOG00015007656	-	86	80.946	Scleropages_formosus
ENSAMXG00000039954	-	95	80.000	ENSSFOG00015011969	-	100	80.000	Scleropages_formosus
ENSAMXG00000039954	-	98	81.380	ENSSFOG00015020002	-	74	81.074	Scleropages_formosus
ENSAMXG00000039954	-	100	81.202	ENSSFOG00015016653	-	72	81.202	Scleropages_formosus
ENSAMXG00000039954	-	100	81.714	ENSSFOG00015000961	-	78	81.714	Scleropages_formosus
ENSAMXG00000039954	-	93	71.918	ENSSMAG00000002122	-	99	71.909	Scophthalmus_maximus
ENSAMXG00000039954	-	84	72.477	ENSSMAG00000012694	-	100	72.455	Scophthalmus_maximus
ENSAMXG00000039954	-	98	72.135	ENSSMAG00000001945	-	99	72.123	Scophthalmus_maximus
ENSAMXG00000039954	-	73	73.345	ENSSMAG00000012898	-	99	73.299	Scophthalmus_maximus
ENSAMXG00000039954	-	96	72.155	ENSSMAG00000011751	-	100	72.142	Scophthalmus_maximus
ENSAMXG00000039954	-	51	75.377	ENSSMAG00000005557	-	100	75.377	Scophthalmus_maximus
ENSAMXG00000039954	-	98	71.615	ENSSMAG00000015938	-	74	71.867	Scophthalmus_maximus
ENSAMXG00000039954	-	63	90.669	ENSXMAG00000029351	-	99	90.669	Xiphophorus_maculatus
ENSAMXG00000039954	-	100	91.049	ENSXMAG00000025249	-	100	91.049	Xiphophorus_maculatus
ENSAMXG00000039954	-	100	90.793	ENSXMAG00000023179	-	74	90.793	Xiphophorus_maculatus
ENSAMXG00000039954	-	94	90.736	ENSXMAG00000025091	-	66	90.746	Xiphophorus_maculatus
ENSAMXG00000039954	-	99	90.769	ENSXMAG00000023308	-	74	90.769	Xiphophorus_maculatus
ENSAMXG00000039954	-	100	90.026	ENSXMAG00000022769	-	100	90.026	Xiphophorus_maculatus
ENSAMXG00000039954	-	100	90.665	ENSXMAG00000025224	-	99	90.665	Xiphophorus_maculatus
ENSAMXG00000039954	-	100	91.176	ENSXMAG00000021961	-	74	91.176	Xiphophorus_maculatus
ENSAMXG00000039954	-	100	90.153	ENSXMAG00000021177	-	100	90.153	Xiphophorus_maculatus