EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040050 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5180 bases
Position: chrAPWO02001957.1:80028-85207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052365	Exo_endo_phos	PF03372.23	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046789	-	813	-	ENSAMXP00000052365	270 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040050	-	79	41.121	ENSAMXG00000034661	-	64	41.121
ENSAMXG00000040050	-	73	30.198	ENSAMXG00000038869	-	81	30.198
ENSAMXG00000040050	-	60	44.720	ENSAMXG00000029029	-	70	44.720

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040050	-	80	47.005	ENSACLG00000016451	-	97	47.005	Astatotilapia_calliptera
ENSAMXG00000040050	-	79	52.074	ENSACLG00000014940	-	76	52.074	Astatotilapia_calliptera
ENSAMXG00000040050	-	71	53.093	ENSACLG00000014815	-	55	53.093	Astatotilapia_calliptera
ENSAMXG00000040050	-	69	47.594	ENSHBUG00000015936	-	98	47.594	Haplochromis_burtoni
ENSAMXG00000040050	-	59	49.057	ENSMZEG00005021230	-	85	49.057	Maylandia_zebra
ENSAMXG00000040050	-	64	47.399	ENSMZEG00005001800	-	94	47.399	Maylandia_zebra
ENSAMXG00000040050	-	62	46.707	ENSMZEG00005002063	-	86	46.707	Maylandia_zebra
ENSAMXG00000040050	-	69	48.663	ENSMZEG00005021213	-	76	49.189	Maylandia_zebra
ENSAMXG00000040050	-	59	49.057	ENSMZEG00005021224	-	85	49.057	Maylandia_zebra
ENSAMXG00000040050	-	76	53.398	ENSMZEG00005003630	-	76	53.398	Maylandia_zebra
ENSAMXG00000040050	-	69	46.524	ENSPNYG00000002216	-	98	46.524	Pundamilia_nyererei
ENSAMXG00000040050	-	79	42.991	ENSPNAG00000014766	-	50	42.991	Pygocentrus_nattereri