EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040095 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 15634 bases
Position: chrAPWO02001957.1:132770-148403
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033139	zf-CCHC	PF00098.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000035953	-	1020	-	ENSAMXP00000033139	339 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040095's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040095	-	73	54.651	ENSAMXG00000035044	-	72	54.651
ENSAMXG00000040095	-	67	55.042	ENSAMXG00000037658	-	71	55.042
ENSAMXG00000040095	-	88	52.189	ENSAMXG00000040142	-	78	52.189
ENSAMXG00000040095	-	71	54.545	ENSAMXG00000029829	-	61	54.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040095	-	69	45.200	ENSACLG00000026211	-	54	45.200	Astatotilapia_calliptera
ENSAMXG00000040095	-	63	48.444	ENSHBUG00000005879	-	83	48.444	Haplochromis_burtoni
ENSAMXG00000040095	-	60	30.734	ENSLACG00000022551	-	56	30.734	Latimeria_chalumnae
ENSAMXG00000040095	-	61	49.099	ENSMZEG00005021211	-	56	49.545	Maylandia_zebra
ENSAMXG00000040095	-	67	44.398	ENSMMOG00000004516	-	73	44.398	Mola_mola