EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040104 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4992 bases
Position: chr12:20427957-20432948
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036442	RVT_1	PF00078.27	4.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044116	-	4992	-	ENSAMXP00000036442	1663 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040104	-	62	68.876	ENSAMXG00000031305	-	97	70.903
ENSAMXG00000040104	-	64	71.295	ENSAMXG00000042699	-	96	71.148
ENSAMXG00000040104	-	84	52.546	ENSAMXG00000040695	-	97	52.613
ENSAMXG00000040104	-	61	53.073	ENSAMXG00000041694	-	98	53.073
ENSAMXG00000040104	-	54	96.903	ENSAMXG00000038310	-	100	96.903
ENSAMXG00000040104	-	100	73.700	ENSAMXG00000036523	-	99	73.653
ENSAMXG00000040104	-	92	74.563	ENSAMXG00000040149	-	98	74.563
ENSAMXG00000040104	-	76	57.720	ENSAMXG00000040915	-	91	48.100
ENSAMXG00000040104	-	84	51.135	ENSAMXG00000033138	-	98	51.255
ENSAMXG00000040104	-	70	95.552	ENSAMXG00000042521	-	92	95.552
ENSAMXG00000040104	-	50	58.095	ENSAMXG00000037157	-	96	58.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040104	-	60	53.954	ENSATEG00000007261	-	97	53.954	Anabas_testudineus
ENSAMXG00000040104	-	66	50.636	ENSATEG00000018457	-	99	50.636	Anabas_testudineus
ENSAMXG00000040104	-	60	53.954	ENSATEG00000021232	-	98	53.954	Anabas_testudineus
ENSAMXG00000040104	-	59	34.000	ENSACAG00000029297	-	79	34.000	Anolis_carolinensis
ENSAMXG00000040104	-	63	33.809	ENSACAG00000029570	-	83	34.283	Anolis_carolinensis
ENSAMXG00000040104	-	62	34.731	ENSACAG00000028334	-	79	34.731	Anolis_carolinensis
ENSAMXG00000040104	-	61	51.527	ENSACLG00000008738	-	91	51.320	Astatotilapia_calliptera
ENSAMXG00000040104	-	65	50.415	ENSACLG00000017671	-	95	50.507	Astatotilapia_calliptera
ENSAMXG00000040104	-	51	54.632	ENSACLG00000025657	-	95	54.567	Astatotilapia_calliptera
ENSAMXG00000040104	-	61	51.365	ENSACLG00000022094	-	99	51.320	Astatotilapia_calliptera
ENSAMXG00000040104	-	51	55.136	ENSCVAG00000020653	-	95	55.136	Cyprinodon_variegatus
ENSAMXG00000040104	-	85	47.759	ENSDARG00000113243	BX511224.1	98	47.759	Danio_rerio
ENSAMXG00000040104	-	86	46.309	ENSDARG00000114583	BX890543.1	99	45.990	Danio_rerio
ENSAMXG00000040104	-	86	47.295	ENSDARG00000113678	BX511082.1	99	47.295	Danio_rerio
ENSAMXG00000040104	-	81	48.074	ENSDARG00000086495	BX546500.1	99	47.861	Danio_rerio
ENSAMXG00000040104	-	54	57.942	ENSDARG00000101547	CR354395.1	100	57.942	Danio_rerio
ENSAMXG00000040104	-	86	47.357	ENSDARG00000099359	CR855320.1	99	47.042	Danio_rerio
ENSAMXG00000040104	-	86	51.633	ENSDARG00000116832	CR749164.1	96	51.860	Danio_rerio
ENSAMXG00000040104	-	85	47.936	ENSDARG00000116402	CR925755.2	99	48.059	Danio_rerio
ENSAMXG00000040104	-	84	52.252	ENSDARG00000112601	FO704673.1	97	51.198	Danio_rerio
ENSAMXG00000040104	-	78	46.018	ENSFHEG00000015797	-	98	45.789	Fundulus_heteroclitus
ENSAMXG00000040104	-	57	49.372	ENSGAFG00000020459	-	99	49.372	Gambusia_affinis
ENSAMXG00000040104	-	85	47.067	ENSGAFG00000015891	-	99	47.001	Gambusia_affinis
ENSAMXG00000040104	-	82	47.156	ENSKMAG00000021870	-	99	47.252	Kryptolebias_marmoratus
ENSAMXG00000040104	-	56	52.350	ENSKMAG00000000229	-	99	52.350	Kryptolebias_marmoratus
ENSAMXG00000040104	-	52	47.093	ENSKMAG00000010098	-	98	47.093	Kryptolebias_marmoratus
ENSAMXG00000040104	-	61	52.071	ENSKMAG00000017146	-	97	52.071	Kryptolebias_marmoratus
ENSAMXG00000040104	-	68	46.590	ENSKMAG00000012888	-	87	46.590	Kryptolebias_marmoratus
ENSAMXG00000040104	-	81	45.575	ENSKMAG00000006793	-	92	45.695	Kryptolebias_marmoratus
ENSAMXG00000040104	-	71	43.963	ENSKMAG00000010001	-	90	42.698	Kryptolebias_marmoratus
ENSAMXG00000040104	-	66	51.643	ENSORLG00000030216	-	87	51.643	Oryzias_latipes
ENSAMXG00000040104	-	87	43.989	ENSORLG00000022552	-	100	44.173	Oryzias_latipes
ENSAMXG00000040104	-	87	45.212	ENSORLG00000030034	-	100	45.146	Oryzias_latipes
ENSAMXG00000040104	-	87	43.665	ENSORLG00000024962	-	99	43.797	Oryzias_latipes
ENSAMXG00000040104	-	85	44.982	ENSORLG00000023008	-	100	44.916	Oryzias_latipes
ENSAMXG00000040104	-	84	44.938	ENSORLG00000024098	-	96	46.110	Oryzias_latipes
ENSAMXG00000040104	-	61	51.721	ENSORLG00000023151	-	94	51.506	Oryzias_latipes
ENSAMXG00000040104	-	74	44.481	ENSORLG00000026506	-	95	44.481	Oryzias_latipes
ENSAMXG00000040104	-	84	44.882	ENSORLG00000030165	-	99	44.990	Oryzias_latipes
ENSAMXG00000040104	-	87	44.096	ENSORLG00000024952	-	100	44.460	Oryzias_latipes
ENSAMXG00000040104	-	87	44.353	ENSORLG00000025108	-	100	44.293	Oryzias_latipes
ENSAMXG00000040104	-	65	50.046	ENSORLG00000025100	-	97	50.046	Oryzias_latipes
ENSAMXG00000040104	-	59	49.142	ENSORLG00000025105	-	96	49.142	Oryzias_latipes
ENSAMXG00000040104	-	64	49.813	ENSORLG00000023407	-	93	49.954	Oryzias_latipes
ENSAMXG00000040104	-	64	50.746	ENSORLG00000024241	-	100	50.746	Oryzias_latipes
ENSAMXG00000040104	-	78	44.545	ENSORLG00000027499	-	100	44.545	Oryzias_latipes
ENSAMXG00000040104	-	87	43.929	ENSORLG00000023643	-	97	44.030	Oryzias_latipes
ENSAMXG00000040104	-	56	53.412	ENSORLG00000027753	-	97	53.425	Oryzias_latipes
ENSAMXG00000040104	-	60	50.150	ENSORLG00000023596	-	95	50.249	Oryzias_latipes
ENSAMXG00000040104	-	65	51.993	ENSORLG00000022135	-	100	52.178	Oryzias_latipes
ENSAMXG00000040104	-	66	50.730	ENSORLG00000028742	-	97	50.912	Oryzias_latipes
ENSAMXG00000040104	-	56	53.412	ENSORLG00000025119	-	97	53.425	Oryzias_latipes
ENSAMXG00000040104	-	84	44.591	ENSORLG00000030124	-	96	45.753	Oryzias_latipes
ENSAMXG00000040104	-	58	48.755	ENSORLG00000024316	-	96	48.755	Oryzias_latipes
ENSAMXG00000040104	-	67	47.853	ENSORLG00000027877	-	99	48.032	Oryzias_latipes
ENSAMXG00000040104	-	87	44.406	ENSORLG00000026067	-	99	44.749	Oryzias_latipes
ENSAMXG00000040104	-	87	44.658	ENSORLG00000029674	-	99	44.719	Oryzias_latipes
ENSAMXG00000040104	-	72	44.683	ENSORLG00000027932	-	88	44.646	Oryzias_latipes
ENSAMXG00000040104	-	64	49.907	ENSORLG00000023674	-	96	50.093	Oryzias_latipes
ENSAMXG00000040104	-	75	46.882	ENSORLG00000027979	-	91	46.792	Oryzias_latipes
ENSAMXG00000040104	-	64	48.609	ENSORLG00000030436	-	97	48.208	Oryzias_latipes
ENSAMXG00000040104	-	54	54.637	ENSORLG00000027523	-	98	54.637	Oryzias_latipes
ENSAMXG00000040104	-	87	45.379	ENSORLG00000022229	-	100	45.634	Oryzias_latipes
ENSAMXG00000040104	-	66	48.543	ENSORLG00000024848	-	97	48.602	Oryzias_latipes
ENSAMXG00000040104	-	64	50.791	ENSORLG00000024198	-	99	50.977	Oryzias_latipes
ENSAMXG00000040104	-	87	45.492	ENSORLG00000021952	-	99	45.621	Oryzias_latipes
ENSAMXG00000040104	-	87	43.839	ENSORLG00000023431	-	97	43.919	Oryzias_latipes
ENSAMXG00000040104	-	86	43.415	ENSORLG00000030585	-	97	43.499	Oryzias_latipes
ENSAMXG00000040104	-	87	44.658	ENSORLG00000022515	-	99	44.719	Oryzias_latipes
ENSAMXG00000040104	-	72	44.776	ENSORLG00000029044	-	91	44.776	Oryzias_latipes
ENSAMXG00000040104	-	61	50.984	ENSORLG00000024925	-	99	51.032	Oryzias_latipes
ENSAMXG00000040104	-	64	49.489	ENSORLG00000029259	-	93	49.366	Oryzias_latipes
ENSAMXG00000040104	-	64	49.720	ENSORLG00000029873	-	95	49.584	Oryzias_latipes
ENSAMXG00000040104	-	61	51.181	ENSORLG00000022683	-	99	51.181	Oryzias_latipes
ENSAMXG00000040104	-	65	48.080	ENSORLG00000027415	-	99	47.964	Oryzias_latipes
ENSAMXG00000040104	-	60	50.895	ENSORLG00000025220	-	100	51.030	Oryzias_latipes
ENSAMXG00000040104	-	64	50.466	ENSORLG00000022062	-	100	50.466	Oryzias_latipes
ENSAMXG00000040104	-	56	53.198	ENSORLG00000024028	-	97	53.214	Oryzias_latipes
ENSAMXG00000040104	-	61	51.622	ENSORLG00000027596	-	94	51.409	Oryzias_latipes
ENSAMXG00000040104	-	87	43.733	ENSORLG00000025916	-	99	43.864	Oryzias_latipes
ENSAMXG00000040104	-	87	43.997	ENSORLG00000024838	-	97	44.098	Oryzias_latipes
ENSAMXG00000040104	-	85	44.928	ENSORLG00000022632	-	97	46.007	Oryzias_latipes
ENSAMXG00000040104	-	87	44.787	ENSORLG00000023585	-	100	44.874	Oryzias_latipes
ENSAMXG00000040104	-	84	44.799	ENSORLG00000026965	-	96	45.896	Oryzias_latipes
ENSAMXG00000040104	-	87	44.025	ENSORLG00000026705	-	100	43.967	Oryzias_latipes
ENSAMXG00000040104	-	56	53.518	ENSORLG00000023147	-	97	53.530	Oryzias_latipes
ENSAMXG00000040104	-	65	49.403	ENSORLG00000024912	-	97	49.273	Oryzias_latipes
ENSAMXG00000040104	-	84	45.854	ENSORLG00000027153	-	98	46.470	Oryzias_latipes
ENSAMXG00000040104	-	87	44.460	ENSORLG00000022696	-	100	44.535	Oryzias_latipes
ENSAMXG00000040104	-	87	44.650	ENSORLG00000022308	-	100	44.739	Oryzias_latipes
ENSAMXG00000040104	-	64	49.907	ENSORLG00020004934	-	96	49.954	Oryzias_latipes_hni
ENSAMXG00000040104	-	87	44.513	ENSORLG00020021168	-	99	44.650	Oryzias_latipes_hni
ENSAMXG00000040104	-	57	51.363	ENSORLG00020021845	-	99	51.192	Oryzias_latipes_hni
ENSAMXG00000040104	-	84	44.868	ENSORLG00020011809	-	96	46.039	Oryzias_latipes_hni
ENSAMXG00000040104	-	83	44.615	ENSORLG00020009070	-	95	45.812	Oryzias_latipes_hni
ENSAMXG00000040104	-	84	44.360	ENSORLG00020001553	-	95	45.632	Oryzias_latipes_hni
ENSAMXG00000040104	-	87	44.612	ENSORLG00020000745	-	100	44.687	Oryzias_latipes_hni
ENSAMXG00000040104	-	60	50.301	ENSORLG00020005114	-	94	50.301	Oryzias_latipes_hni
ENSAMXG00000040104	-	61	50.740	ENSORLG00020003377	-	87	50.537	Oryzias_latipes_hni
ENSAMXG00000040104	-	84	44.938	ENSORLG00020000947	-	96	46.039	Oryzias_latipes_hni
ENSAMXG00000040104	-	87	44.719	ENSORLG00020013601	-	100	44.807	Oryzias_latipes_hni
ENSAMXG00000040104	-	56	52.985	ENSORLG00020013042	-	97	53.003	Oryzias_latipes_hni
ENSAMXG00000040104	-	79	49.402	ENSORLG00020005141	-	94	49.402	Oryzias_latipes_hni
ENSAMXG00000040104	-	66	47.709	ENSORLG00020017439	-	99	48.338	Oryzias_latipes_hni
ENSAMXG00000040104	-	67	49.062	ENSORLG00020011789	-	93	49.240	Oryzias_latipes_hni
ENSAMXG00000040104	-	87	44.589	ENSORLG00020020735	-	99	44.650	Oryzias_latipes_hni
ENSAMXG00000040104	-	80	45.091	ENSORLG00020003499	-	92	46.327	Oryzias_latipes_hni
ENSAMXG00000040104	-	64	49.582	ENSORLG00020011308	-	93	49.457	Oryzias_latipes_hni
ENSAMXG00000040104	-	87	44.658	ENSORLG00020003988	-	99	44.719	Oryzias_latipes_hni
ENSAMXG00000040104	-	70	47.676	ENSORLG00020005485	-	98	47.570	Oryzias_latipes_hni
ENSAMXG00000040104	-	84	44.938	ENSORLG00020008167	-	96	46.039	Oryzias_latipes_hni
ENSAMXG00000040104	-	72	50.171	ENSORLG00020014566	-	95	49.832	Oryzias_latipes_hni
ENSAMXG00000040104	-	87	44.582	ENSORLG00015008912	-	100	44.656	Oryzias_latipes_hsok
ENSAMXG00000040104	-	69	49.286	ENSORLG00015010438	-	96	49.286	Oryzias_latipes_hsok
ENSAMXG00000040104	-	69	42.060	ENSORLG00015005993	-	87	41.938	Oryzias_latipes_hsok
ENSAMXG00000040104	-	86	41.971	ENSORLG00015011577	-	99	42.066	Oryzias_latipes_hsok
ENSAMXG00000040104	-	74	42.000	ENSORLG00015009802	-	92	42.000	Oryzias_latipes_hsok
ENSAMXG00000040104	-	63	50.522	ENSORLG00015020866	-	97	50.758	Oryzias_latipes_hsok
ENSAMXG00000040104	-	58	49.692	ENSORLG00015021573	-	99	49.692	Oryzias_latipes_hsok
ENSAMXG00000040104	-	86	44.997	ENSORLG00015006303	-	100	44.681	Oryzias_latipes_hsok
ENSAMXG00000040104	-	87	44.513	ENSORLG00015021482	-	100	44.663	Oryzias_latipes_hsok
ENSAMXG00000040104	-	60	50.699	ENSORLG00015001210	-	94	50.343	Oryzias_latipes_hsok
ENSAMXG00000040104	-	87	44.444	ENSORLG00015016198	-	100	44.596	Oryzias_latipes_hsok
ENSAMXG00000040104	-	62	50.629	ENSORLG00015020941	-	98	50.479	Oryzias_latipes_hsok
ENSAMXG00000040104	-	85	44.654	ENSORLG00015021620	-	89	45.692	Oryzias_latipes_hsok
ENSAMXG00000040104	-	81	44.542	ENSORLG00015014929	-	99	44.623	Oryzias_latipes_hsok
ENSAMXG00000040104	-	71	42.485	ENSORLG00015018042	-	92	42.401	Oryzias_latipes_hsok
ENSAMXG00000040104	-	78	41.992	ENSORLG00015010296	-	83	42.146	Oryzias_latipes_hsok
ENSAMXG00000040104	-	79	44.184	ENSORLG00015019144	-	99	44.328	Oryzias_latipes_hsok
ENSAMXG00000040104	-	68	47.368	ENSORLG00015019527	-	99	47.368	Oryzias_latipes_hsok
ENSAMXG00000040104	-	75	41.322	ENSORLG00015022412	-	95	41.256	Oryzias_latipes_hsok
ENSAMXG00000040104	-	81	50.000	ENSORLG00015019969	-	100	44.317	Oryzias_latipes_hsok
ENSAMXG00000040104	-	87	44.047	ENSORLG00015022083	-	100	44.126	Oryzias_latipes_hsok
ENSAMXG00000040104	-	62	46.603	ENSOMEG00000006056	-	90	46.793	Oryzias_melastigma
ENSAMXG00000040104	-	56	51.923	ENSOMEG00000011861	-	99	51.923	Oryzias_melastigma
ENSAMXG00000040104	-	77	50.503	ENSOMEG00000007684	-	98	50.115	Oryzias_melastigma
ENSAMXG00000040104	-	70	46.777	ENSOMEG00000008259	-	95	48.249	Oryzias_melastigma
ENSAMXG00000040104	-	61	51.906	ENSOMEG00000013280	-	99	51.906	Oryzias_melastigma
ENSAMXG00000040104	-	87	45.230	ENSOMEG00000022422	-	99	45.616	Oryzias_melastigma
ENSAMXG00000040104	-	50	52.563	ENSOMEG00000005417	-	96	52.563	Oryzias_melastigma
ENSAMXG00000040104	-	82	51.113	ENSOMEG00000017119	-	93	51.554	Oryzias_melastigma
ENSAMXG00000040104	-	60	53.938	ENSOMEG00000011112	-	98	53.938	Oryzias_melastigma
ENSAMXG00000040104	-	66	51.432	ENSOMEG00000010967	-	85	51.432	Oryzias_melastigma
ENSAMXG00000040104	-	70	50.043	ENSPKIG00000005143	-	99	50.128	Paramormyrops_kingsleyae
ENSAMXG00000040104	-	71	48.536	ENSPKIG00000009885	-	99	47.883	Paramormyrops_kingsleyae
ENSAMXG00000040104	-	54	51.050	ENSPFOG00000022857	-	99	51.050	Poecilia_formosa
ENSAMXG00000040104	-	64	51.532	ENSPMEG00000022292	-	99	51.718	Poecilia_mexicana
ENSAMXG00000040104	-	60	50.955	ENSPREG00000005745	-	99	50.955	Poecilia_reticulata
ENSAMXG00000040104	-	73	46.264	ENSSDUG00000012982	-	99	46.099	Seriola_dumerili
ENSAMXG00000040104	-	63	53.802	ENSSLDG00000016219	-	99	53.802	Seriola_lalandi_dorsalis
ENSAMXG00000040104	-	62	44.896	ENSSPUG00000017371	-	90	45.085	Sphenodon_punctatus
ENSAMXG00000040104	-	86	45.392	ENSXCOG00000000074	-	99	45.599	Xiphophorus_couchianus