EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040121 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2550 bases
Position: chr17:7857318-7859867
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000046192	RVT_1	PF00078.27	2e-43	1	1
ENSAMXP00000046192	Exo_endo_phos	PF03372.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048276	-	2550	-	ENSAMXP00000046192	849 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040121	-	99	36.773	ENSAMXG00000042761	-	66	36.773
ENSAMXG00000040121	-	99	34.629	ENSAMXG00000034221	-	67	34.747
ENSAMXG00000040121	-	99	41.706	ENSAMXG00000042337	-	95	41.706
ENSAMXG00000040121	-	70	37.645	ENSAMXG00000037218	-	60	37.645
ENSAMXG00000040121	-	88	39.600	ENSAMXG00000041150	-	73	39.600
ENSAMXG00000040121	-	99	51.605	ENSAMXG00000036146	-	66	51.605
ENSAMXG00000040121	-	99	37.857	ENSAMXG00000036080	-	73	37.857
ENSAMXG00000040121	-	99	46.017	ENSAMXG00000037256	-	67	46.017
ENSAMXG00000040121	-	99	34.286	ENSAMXG00000031230	-	66	34.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040121	-	84	42.517	ENSAPOG00000011184	-	62	42.817	Acanthochromis_polyacanthus
ENSAMXG00000040121	-	99	39.027	ENSAPOG00000013536	-	67	39.027	Acanthochromis_polyacanthus
ENSAMXG00000040121	-	80	40.996	ENSAOCG00000011998	-	61	40.996	Amphiprion_ocellaris
ENSAMXG00000040121	-	97	41.466	ENSAOCG00000017326	-	62	41.346	Amphiprion_ocellaris
ENSAMXG00000040121	-	53	34.945	ENSAOCG00000012592	-	98	34.945	Amphiprion_ocellaris
ENSAMXG00000040121	-	97	41.466	ENSAOCG00000021572	-	66	41.346	Amphiprion_ocellaris
ENSAMXG00000040121	-	79	40.060	ENSAOCG00000019370	-	61	40.060	Amphiprion_ocellaris
ENSAMXG00000040121	-	80	43.045	ENSAPEG00000002696	-	78	43.045	Amphiprion_percula
ENSAMXG00000040121	-	86	42.219	ENSAPEG00000007540	-	61	42.084	Amphiprion_percula
ENSAMXG00000040121	-	97	41.226	ENSAPEG00000017003	-	66	41.106	Amphiprion_percula
ENSAMXG00000040121	-	97	41.106	ENSAPEG00000001971	-	66	40.986	Amphiprion_percula
ENSAMXG00000040121	-	80	43.045	ENSAPEG00000017325	-	74	43.045	Amphiprion_percula
ENSAMXG00000040121	-	80	43.045	ENSAPEG00000003065	-	78	43.045	Amphiprion_percula
ENSAMXG00000040121	-	99	36.611	ENSAPEG00000013213	-	67	36.611	Amphiprion_percula
ENSAMXG00000040121	-	92	37.803	ENSAPEG00000003655	-	54	37.803	Amphiprion_percula
ENSAMXG00000040121	-	94	37.484	ENSAPEG00000002768	-	57	37.484	Amphiprion_percula
ENSAMXG00000040121	-	97	41.226	ENSAPEG00000006674	-	66	41.106	Amphiprion_percula
ENSAMXG00000040121	-	99	36.611	ENSAPEG00000003616	-	67	36.611	Amphiprion_percula
ENSAMXG00000040121	-	67	37.478	ENSAPEG00000019256	-	58	37.478	Amphiprion_percula
ENSAMXG00000040121	-	92	41.124	ENSACLG00000025597	-	63	41.229	Astatotilapia_calliptera
ENSAMXG00000040121	-	93	36.066	ENSACLG00000023216	-	54	36.066	Astatotilapia_calliptera
ENSAMXG00000040121	-	65	43.116	ENSACLG00000007324	-	57	43.116	Astatotilapia_calliptera
ENSAMXG00000040121	-	98	35.054	ENSACLG00000022582	-	58	35.054	Astatotilapia_calliptera
ENSAMXG00000040121	-	65	41.682	ENSACLG00000027433	-	56	41.682	Astatotilapia_calliptera
ENSAMXG00000040121	-	83	38.976	ENSACLG00000003130	-	77	38.976	Astatotilapia_calliptera
ENSAMXG00000040121	-	99	35.900	ENSACLG00000002829	-	63	35.900	Astatotilapia_calliptera
ENSAMXG00000040121	-	99	38.434	ENSACLG00000023597	-	66	38.434	Astatotilapia_calliptera
ENSAMXG00000040121	-	79	37.574	ENSACLG00000020021	-	80	37.574	Astatotilapia_calliptera
ENSAMXG00000040121	-	99	35.782	ENSACLG00000014342	-	59	35.782	Astatotilapia_calliptera
ENSAMXG00000040121	-	71	41.791	ENSACLG00000012223	-	58	41.791	Astatotilapia_calliptera
ENSAMXG00000040121	-	79	38.131	ENSACLG00000010561	-	62	38.131	Astatotilapia_calliptera
ENSAMXG00000040121	-	99	38.843	ENSACLG00000005466	-	65	38.843	Astatotilapia_calliptera
ENSAMXG00000040121	-	99	37.308	ENSACLG00000014178	-	87	37.308	Astatotilapia_calliptera
ENSAMXG00000040121	-	99	37.232	ENSACLG00000003800	-	66	37.232	Astatotilapia_calliptera
ENSAMXG00000040121	-	59	44.869	ENSACLG00000018473	-	55	44.869	Astatotilapia_calliptera
ENSAMXG00000040121	-	93	35.813	ENSACLG00000019378	-	54	35.813	Astatotilapia_calliptera
ENSAMXG00000040121	-	96	41.595	ENSACLG00000009895	-	63	41.595	Astatotilapia_calliptera
ENSAMXG00000040121	-	84	39.106	ENSACLG00000015440	-	65	39.161	Astatotilapia_calliptera
ENSAMXG00000040121	-	53	32.819	ENSCVAG00000007707	-	64	32.819	Cyprinodon_variegatus
ENSAMXG00000040121	-	76	36.533	ENSDARG00000103562	CU462878.2	73	36.533	Danio_rerio
ENSAMXG00000040121	-	99	37.633	ENSDARG00000088493	si:ch211-149k12.3	67	37.455	Danio_rerio
ENSAMXG00000040121	-	51	30.580	ENSHBUG00000020853	-	57	30.580	Haplochromis_burtoni
ENSAMXG00000040121	-	79	38.996	ENSKMAG00000000167	-	61	38.996	Kryptolebias_marmoratus
ENSAMXG00000040121	-	62	40.301	ENSKMAG00000014872	-	64	40.000	Kryptolebias_marmoratus
ENSAMXG00000040121	-	99	37.485	ENSKMAG00000015152	-	66	37.485	Kryptolebias_marmoratus
ENSAMXG00000040121	-	98	33.254	ENSKMAG00000006247	-	66	33.254	Kryptolebias_marmoratus
ENSAMXG00000040121	-	99	37.028	ENSKMAG00000022168	-	67	36.967	Kryptolebias_marmoratus
ENSAMXG00000040121	-	98	33.254	ENSKMAG00000008495	-	66	33.254	Kryptolebias_marmoratus
ENSAMXG00000040121	-	84	44.085	ENSKMAG00000000885	-	63	44.085	Kryptolebias_marmoratus
ENSAMXG00000040121	-	55	43.441	ENSKMAG00000015838	-	52	43.441	Kryptolebias_marmoratus
ENSAMXG00000040121	-	84	34.123	ENSKMAG00000006263	-	71	34.123	Kryptolebias_marmoratus
ENSAMXG00000040121	-	90	35.807	ENSKMAG00000014507	-	98	35.807	Kryptolebias_marmoratus
ENSAMXG00000040121	-	95	35.723	ENSKMAG00000009272	-	98	35.723	Kryptolebias_marmoratus
ENSAMXG00000040121	-	88	38.718	ENSKMAG00000015935	-	64	38.718	Kryptolebias_marmoratus
ENSAMXG00000040121	-	84	34.123	ENSKMAG00000003480	-	71	34.123	Kryptolebias_marmoratus
ENSAMXG00000040121	-	78	33.585	ENSLBEG00000015758	-	93	33.585	Labrus_bergylta
ENSAMXG00000040121	-	98	33.935	ENSMZEG00005024554	-	55	33.935	Maylandia_zebra
ENSAMXG00000040121	-	51	33.410	ENSMZEG00005008304	-	99	33.410	Maylandia_zebra
ENSAMXG00000040121	-	57	40.695	ENSMZEG00005017030	-	92	40.695	Maylandia_zebra
ENSAMXG00000040121	-	57	40.956	ENSMZEG00005011529	-	90	40.956	Maylandia_zebra
ENSAMXG00000040121	-	51	33.410	ENSMZEG00005025877	-	99	33.410	Maylandia_zebra
ENSAMXG00000040121	-	98	35.774	ENSMZEG00005026873	-	57	35.774	Maylandia_zebra
ENSAMXG00000040121	-	93	40.455	ENSMZEG00005021767	-	99	40.455	Maylandia_zebra
ENSAMXG00000040121	-	52	39.140	ENSNBRG00000012595	-	99	39.140	Neolamprologus_brichardi
ENSAMXG00000040121	-	96	35.373	ENSORLG00000023604	-	99	35.531	Oryzias_latipes
ENSAMXG00000040121	-	58	46.881	ENSORLG00000029308	-	54	46.881	Oryzias_latipes
ENSAMXG00000040121	-	53	48.565	ENSORLG00000025323	-	52	48.565	Oryzias_latipes
ENSAMXG00000040121	-	69	40.577	ENSORLG00000030415	-	73	40.577	Oryzias_latipes
ENSAMXG00000040121	-	79	43.472	ENSORLG00000027031	-	62	43.472	Oryzias_latipes
ENSAMXG00000040121	-	65	43.273	ENSORLG00000023016	-	57	43.273	Oryzias_latipes
ENSAMXG00000040121	-	53	46.681	ENSORLG00000024437	-	52	46.681	Oryzias_latipes
ENSAMXG00000040121	-	78	43.570	ENSORLG00000024526	-	61	43.570	Oryzias_latipes
ENSAMXG00000040121	-	92	35.541	ENSORLG00000022346	-	65	35.550	Oryzias_latipes
ENSAMXG00000040121	-	53	46.903	ENSORLG00000026318	-	52	46.903	Oryzias_latipes
ENSAMXG00000040121	-	65	43.841	ENSORLG00000027043	-	61	43.841	Oryzias_latipes
ENSAMXG00000040121	-	53	48.230	ENSORLG00000025901	-	55	48.230	Oryzias_latipes
ENSAMXG00000040121	-	68	41.056	ENSORLG00000026511	-	58	41.056	Oryzias_latipes
ENSAMXG00000040121	-	53	46.681	ENSORLG00000025476	-	54	46.681	Oryzias_latipes
ENSAMXG00000040121	-	65	44.022	ENSORLG00000030529	-	57	44.022	Oryzias_latipes
ENSAMXG00000040121	-	91	36.223	ENSORLG00000016964	-	61	36.223	Oryzias_latipes
ENSAMXG00000040121	-	56	45.243	ENSORLG00000027405	-	52	45.243	Oryzias_latipes
ENSAMXG00000040121	-	99	37.931	ENSORLG00000027370	-	65	37.931	Oryzias_latipes
ENSAMXG00000040121	-	79	44.510	ENSORLG00000024415	-	62	44.510	Oryzias_latipes
ENSAMXG00000040121	-	65	38.849	ENSORLG00000024714	-	61	38.849	Oryzias_latipes
ENSAMXG00000040121	-	97	36.165	ENSORLG00000027914	-	65	36.165	Oryzias_latipes
ENSAMXG00000040121	-	56	35.699	ENSORLG00000024464	-	82	35.430	Oryzias_latipes
ENSAMXG00000040121	-	79	44.444	ENSORLG00000027515	-	62	44.444	Oryzias_latipes
ENSAMXG00000040121	-	60	44.576	ENSORLG00000024972	-	54	44.576	Oryzias_latipes
ENSAMXG00000040121	-	79	43.472	ENSORLG00000025613	-	62	43.472	Oryzias_latipes
ENSAMXG00000040121	-	77	43.338	ENSORLG00000027755	-	60	43.338	Oryzias_latipes
ENSAMXG00000040121	-	53	48.230	ENSORLG00000028121	-	52	48.230	Oryzias_latipes
ENSAMXG00000040121	-	82	44.857	ENSORLG00000024921	-	63	44.857	Oryzias_latipes
ENSAMXG00000040121	-	93	42.821	ENSORLG00000028313	-	92	42.894	Oryzias_latipes
ENSAMXG00000040121	-	65	43.659	ENSORLG00000029491	-	57	43.659	Oryzias_latipes
ENSAMXG00000040121	-	79	37.202	ENSORLG00000027244	-	65	37.202	Oryzias_latipes
ENSAMXG00000040121	-	79	44.362	ENSORLG00000021840	-	62	44.362	Oryzias_latipes
ENSAMXG00000040121	-	55	31.237	ENSORLG00000023632	-	50	31.237	Oryzias_latipes
ENSAMXG00000040121	-	93	41.846	ENSORLG00000027152	-	66	41.846	Oryzias_latipes
ENSAMXG00000040121	-	98	38.239	ENSORLG00000023283	-	57	38.239	Oryzias_latipes
ENSAMXG00000040121	-	65	43.841	ENSORLG00000026019	-	57	43.841	Oryzias_latipes
ENSAMXG00000040121	-	84	31.139	ENSORLG00000027187	-	61	31.139	Oryzias_latipes
ENSAMXG00000040121	-	93	43.236	ENSORLG00020006395	-	66	43.236	Oryzias_latipes_hni
ENSAMXG00000040121	-	99	37.204	ENSORLG00020013447	-	66	37.204	Oryzias_latipes_hni
ENSAMXG00000040121	-	79	37.243	ENSORLG00020006733	-	60	37.243	Oryzias_latipes_hni
ENSAMXG00000040121	-	65	41.486	ENSORLG00020001651	-	64	41.486	Oryzias_latipes_hni
ENSAMXG00000040121	-	99	37.204	ENSORLG00020000006	-	66	37.204	Oryzias_latipes_hni
ENSAMXG00000040121	-	79	44.741	ENSORLG00020013149	-	73	44.741	Oryzias_latipes_hni
ENSAMXG00000040121	-	68	39.619	ENSORLG00020002715	-	58	39.619	Oryzias_latipes_hni
ENSAMXG00000040121	-	62	44.000	ENSORLG00020005776	-	55	44.000	Oryzias_latipes_hni
ENSAMXG00000040121	-	56	39.375	ENSORLG00020014626	-	88	39.375	Oryzias_latipes_hni
ENSAMXG00000040121	-	92	35.414	ENSORLG00020011252	-	62	35.422	Oryzias_latipes_hni
ENSAMXG00000040121	-	79	45.037	ENSORLG00020003980	-	81	45.037	Oryzias_latipes_hni
ENSAMXG00000040121	-	92	35.414	ENSORLG00020017795	-	63	35.422	Oryzias_latipes_hni
ENSAMXG00000040121	-	98	36.766	ENSORLG00020022514	-	58	36.766	Oryzias_latipes_hni
ENSAMXG00000040121	-	99	39.192	ENSORLG00020005675	-	69	39.192	Oryzias_latipes_hni
ENSAMXG00000040121	-	92	35.414	ENSORLG00020002457	-	62	35.422	Oryzias_latipes_hni
ENSAMXG00000040121	-	97	38.582	ENSORLG00020017758	-	65	38.582	Oryzias_latipes_hni
ENSAMXG00000040121	-	65	44.928	ENSORLG00020000993	-	58	44.928	Oryzias_latipes_hni
ENSAMXG00000040121	-	99	35.867	ENSORLG00020004108	-	67	35.943	Oryzias_latipes_hni
ENSAMXG00000040121	-	96	38.452	ENSORLG00020012298	-	67	38.452	Oryzias_latipes_hni
ENSAMXG00000040121	-	95	38.471	ENSORLG00015000481	-	58	38.471	Oryzias_latipes_hsok
ENSAMXG00000040121	-	95	38.137	ENSORLG00015000698	-	56	38.137	Oryzias_latipes_hsok
ENSAMXG00000040121	-	99	35.867	ENSORLG00015015916	-	67	35.943	Oryzias_latipes_hsok
ENSAMXG00000040121	-	58	39.034	ENSORLG00015021206	-	95	39.034	Oryzias_latipes_hsok
ENSAMXG00000040121	-	99	35.867	ENSORLG00015015244	-	67	35.943	Oryzias_latipes_hsok
ENSAMXG00000040121	-	99	38.005	ENSORLG00015004680	-	58	38.005	Oryzias_latipes_hsok
ENSAMXG00000040121	-	99	35.867	ENSORLG00015002104	-	66	35.943	Oryzias_latipes_hsok
ENSAMXG00000040121	-	99	34.000	ENSOMEG00000002370	-	95	33.844	Oryzias_melastigma
ENSAMXG00000040121	-	64	41.805	ENSOMEG00000001546	-	55	41.805	Oryzias_melastigma
ENSAMXG00000040121	-	59	44.862	ENSOMEG00000010354	-	53	44.862	Oryzias_melastigma
ENSAMXG00000040121	-	87	37.805	ENSOMEG00000023189	-	64	37.805	Oryzias_melastigma
ENSAMXG00000040121	-	71	35.275	ENSPFOG00000024463	-	77	35.275	Poecilia_formosa
ENSAMXG00000040121	-	61	40.698	ENSPMEG00000013148	-	55	40.698	Poecilia_mexicana
ENSAMXG00000040121	-	52	40.181	ENSPMEG00000015117	-	51	40.181	Poecilia_mexicana
ENSAMXG00000040121	-	92	37.179	ENSPMEG00000010792	-	99	37.179	Poecilia_mexicana
ENSAMXG00000040121	-	56	44.550	ENSPREG00000006891	-	93	44.550	Poecilia_reticulata
ENSAMXG00000040121	-	55	39.186	ENSPREG00000006501	-	82	39.186	Poecilia_reticulata
ENSAMXG00000040121	-	99	38.398	ENSSLDG00000000631	-	72	38.398	Seriola_lalandi_dorsalis
ENSAMXG00000040121	-	99	38.398	ENSSLDG00000004747	-	72	38.398	Seriola_lalandi_dorsalis
ENSAMXG00000040121	-	52	35.374	ENSSPUG00000015446	-	99	35.374	Sphenodon_punctatus
ENSAMXG00000040121	-	98	37.619	ENSSPAG00000013503	-	57	37.619	Stegastes_partitus
ENSAMXG00000040121	-	64	32.605	ENSSPAG00000009351	-	94	32.907	Stegastes_partitus
ENSAMXG00000040121	-	50	43.326	ENSSPAG00000000151	-	93	43.326	Stegastes_partitus
ENSAMXG00000040121	-	58	38.076	ENSXETG00000034134	-	63	38.076	Xenopus_tropicalis
ENSAMXG00000040121	-	70	35.789	ENSXETG00000032308	-	70	35.789	Xenopus_tropicalis
ENSAMXG00000040121	-	95	33.742	ENSXETG00000031149	-	59	33.742	Xenopus_tropicalis
ENSAMXG00000040121	-	95	32.641	ENSXETG00000002021	-	63	32.643	Xenopus_tropicalis
ENSAMXG00000040121	-	58	37.647	ENSXETG00000030860	-	60	37.647	Xenopus_tropicalis
ENSAMXG00000040121	-	84	39.641	ENSXMAG00000023746	-	63	39.696	Xiphophorus_maculatus
ENSAMXG00000040121	-	59	36.133	ENSXMAG00000027569	-	54	36.133	Xiphophorus_maculatus
ENSAMXG00000040121	-	65	35.305	ENSXMAG00000024176	-	57	35.305	Xiphophorus_maculatus