EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040142 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1086 bases
Position: chrAPWO02001957.1:80995-82080
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043223	zf-CCHC	PF00098.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043129	-	1011	-	ENSAMXP00000043223	336 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040142	-	78	52.189	ENSAMXG00000040095	-	88	52.189
ENSAMXG00000040142	-	65	63.525	ENSAMXG00000035044	-	68	63.525
ENSAMXG00000040142	-	59	52.444	ENSAMXG00000037658	-	67	52.444
ENSAMXG00000040142	-	60	55.752	ENSAMXG00000029829	-	55	55.752

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040142	-	62	38.428	ENSMMOG00000012163	-	64	38.428	Mola_mola
ENSAMXG00000040142	-	70	37.860	ENSPNAG00000020714	-	73	37.860	Pygocentrus_nattereri