EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040149 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4680 bases
Position: chrAPWO02001319.1:57599-62278
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052380	RVT_1	PF00078.27	4.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048074	-	4680	-	ENSAMXP00000052380	1559 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040149	-	51	37.838	ENSAMXG00000034382	-	73	36.730
ENSAMXG00000040149	-	66	51.336	ENSAMXG00000041694	-	99	51.699
ENSAMXG00000040149	-	75	78.272	ENSAMXG00000042521	-	91	78.276
ENSAMXG00000040149	-	53	37.788	ENSAMXG00000030987	-	57	37.788
ENSAMXG00000040149	-	54	79.505	ENSAMXG00000038310	-	94	79.505
ENSAMXG00000040149	-	67	72.062	ENSAMXG00000031305	-	99	72.062
ENSAMXG00000040149	-	96	74.118	ENSAMXG00000036523	-	93	73.445
ENSAMXG00000040149	-	55	32.227	ENSAMXG00000036680	-	54	33.853
ENSAMXG00000040149	-	52	39.286	ENSAMXG00000038169	-	65	39.286
ENSAMXG00000040149	-	55	59.086	ENSAMXG00000037157	-	98	59.086
ENSAMXG00000040149	-	90	52.572	ENSAMXG00000040695	-	93	53.947
ENSAMXG00000040149	-	52	33.477	ENSAMXG00000038578	-	60	33.477
ENSAMXG00000040149	-	64	73.360	ENSAMXG00000042699	-	90	73.360
ENSAMXG00000040149	-	90	51.661	ENSAMXG00000033138	-	96	51.622
ENSAMXG00000040149	-	51	36.344	ENSAMXG00000032559	-	72	36.344
ENSAMXG00000040149	-	98	74.563	ENSAMXG00000040104	-	92	74.563
ENSAMXG00000040149	-	84	59.189	ENSAMXG00000040915	-	90	49.141
ENSAMXG00000040149	-	52	33.551	ENSAMXG00000040892	-	52	33.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040149	-	69	49.861	ENSATEG00000018457	-	97	49.953	Anabas_testudineus
ENSAMXG00000040149	-	65	52.626	ENSATEG00000021232	-	98	52.626	Anabas_testudineus
ENSAMXG00000040149	-	65	52.626	ENSATEG00000007261	-	98	52.626	Anabas_testudineus
ENSAMXG00000040149	-	63	33.619	ENSACAG00000029297	-	79	33.619	Anolis_carolinensis
ENSAMXG00000040149	-	51	42.599	ENSACAG00000028286	-	97	42.406	Anolis_carolinensis
ENSAMXG00000040149	-	51	42.479	ENSACAG00000029679	-	91	42.284	Anolis_carolinensis
ENSAMXG00000040149	-	66	34.369	ENSACAG00000028334	-	79	34.369	Anolis_carolinensis
ENSAMXG00000040149	-	68	33.600	ENSACAG00000029570	-	83	33.600	Anolis_carolinensis
ENSAMXG00000040149	-	51	42.599	ENSACAG00000029095	-	87	42.406	Anolis_carolinensis
ENSAMXG00000040149	-	70	49.864	ENSACLG00000017671	-	97	50.226	Astatotilapia_calliptera
ENSAMXG00000040149	-	55	53.981	ENSACLG00000025657	-	98	53.510	Astatotilapia_calliptera
ENSAMXG00000040149	-	65	52.590	ENSACLG00000022094	-	98	52.709	Astatotilapia_calliptera
ENSAMXG00000040149	-	52	53.043	ENSACLG00000001434	-	93	53.043	Astatotilapia_calliptera
ENSAMXG00000040149	-	65	52.569	ENSACLG00000008738	-	90	52.611	Astatotilapia_calliptera
ENSAMXG00000040149	-	55	55.543	ENSCVAG00000020653	-	97	55.543	Cyprinodon_variegatus
ENSAMXG00000040149	-	92	51.074	ENSDARG00000116832	CR749164.1	95	51.005	Danio_rerio
ENSAMXG00000040149	-	86	48.301	ENSDARG00000116402	CR925755.2	96	47.939	Danio_rerio
ENSAMXG00000040149	-	91	48.197	ENSDARG00000113678	BX511082.1	95	49.387	Danio_rerio
ENSAMXG00000040149	-	92	46.426	ENSDARG00000114583	BX890543.1	98	46.379	Danio_rerio
ENSAMXG00000040149	-	57	58.482	ENSDARG00000101547	CR354395.1	100	58.482	Danio_rerio
ENSAMXG00000040149	-	93	52.450	ENSDARG00000112601	FO704673.1	94	53.774	Danio_rerio
ENSAMXG00000040149	-	92	47.218	ENSDARG00000113243	BX511224.1	99	47.128	Danio_rerio
ENSAMXG00000040149	-	87	47.175	ENSDARG00000086495	BX546500.1	99	46.946	Danio_rerio
ENSAMXG00000040149	-	91	46.533	ENSDARG00000099359	CR855320.1	99	46.533	Danio_rerio
ENSAMXG00000040149	-	83	45.065	ENSFHEG00000015797	-	99	44.973	Fundulus_heteroclitus
ENSAMXG00000040149	-	61	50.790	ENSGAFG00000020459	-	99	50.790	Gambusia_affinis
ENSAMXG00000040149	-	91	47.140	ENSGAFG00000015891	-	99	47.835	Gambusia_affinis
ENSAMXG00000040149	-	65	52.465	ENSKMAG00000017146	-	97	52.465	Kryptolebias_marmoratus
ENSAMXG00000040149	-	56	48.276	ENSKMAG00000010098	-	99	48.276	Kryptolebias_marmoratus
ENSAMXG00000040149	-	89	47.305	ENSKMAG00000021870	-	96	48.718	Kryptolebias_marmoratus
ENSAMXG00000040149	-	91	44.221	ENSKMAG00000006793	-	93	45.329	Kryptolebias_marmoratus
ENSAMXG00000040149	-	78	43.492	ENSKMAG00000012888	-	87	45.760	Kryptolebias_marmoratus
ENSAMXG00000040149	-	72	49.055	ENSKMAG00000010001	-	85	49.055	Kryptolebias_marmoratus
ENSAMXG00000040149	-	60	53.953	ENSKMAG00000000229	-	99	53.953	Kryptolebias_marmoratus
ENSAMXG00000040149	-	69	49.770	ENSORLG00000023407	-	93	50.000	Oryzias_latipes
ENSAMXG00000040149	-	69	51.667	ENSORLG00000022135	-	99	51.914	Oryzias_latipes
ENSAMXG00000040149	-	88	46.426	ENSORLG00000027153	-	97	46.705	Oryzias_latipes
ENSAMXG00000040149	-	92	44.935	ENSORLG00000023431	-	96	45.010	Oryzias_latipes
ENSAMXG00000040149	-	92	43.754	ENSORLG00000030585	-	97	43.970	Oryzias_latipes
ENSAMXG00000040149	-	65	50.147	ENSORLG00000023596	-	96	50.294	Oryzias_latipes
ENSAMXG00000040149	-	93	44.369	ENSORLG00000025916	-	99	44.444	Oryzias_latipes
ENSAMXG00000040149	-	93	45.785	ENSORLG00000026067	-	99	45.927	Oryzias_latipes
ENSAMXG00000040149	-	92	45.062	ENSORLG00000030034	-	99	45.000	Oryzias_latipes
ENSAMXG00000040149	-	65	51.232	ENSORLG00000023151	-	95	50.680	Oryzias_latipes
ENSAMXG00000040149	-	69	50.140	ENSORLG00000022062	-	99	50.094	Oryzias_latipes
ENSAMXG00000040149	-	77	43.941	ENSORLG00000030216	-	90	44.270	Oryzias_latipes
ENSAMXG00000040149	-	92	44.976	ENSORLG00000021952	-	99	45.119	Oryzias_latipes
ENSAMXG00000040149	-	84	44.721	ENSORLG00000027499	-	100	44.478	Oryzias_latipes
ENSAMXG00000040149	-	80	47.657	ENSORLG00000027979	-	91	47.581	Oryzias_latipes
ENSAMXG00000040149	-	93	44.301	ENSORLG00000024962	-	99	44.376	Oryzias_latipes
ENSAMXG00000040149	-	93	45.833	ENSORLG00000022515	-	99	46.191	Oryzias_latipes
ENSAMXG00000040149	-	91	44.621	ENSORLG00000024098	-	96	45.816	Oryzias_latipes
ENSAMXG00000040149	-	62	53.257	ENSORLG00000023147	-	99	53.354	Oryzias_latipes
ENSAMXG00000040149	-	70	50.183	ENSORLG00000023674	-	97	50.366	Oryzias_latipes
ENSAMXG00000040149	-	70	49.863	ENSORLG00000029259	-	92	50.046	Oryzias_latipes
ENSAMXG00000040149	-	90	43.914	ENSORLG00000022632	-	94	45.243	Oryzias_latipes
ENSAMXG00000040149	-	71	49.549	ENSORLG00000024912	-	98	49.459	Oryzias_latipes
ENSAMXG00000040149	-	62	53.051	ENSORLG00000024028	-	99	53.148	Oryzias_latipes
ENSAMXG00000040149	-	92	45.254	ENSORLG00000025108	-	99	45.261	Oryzias_latipes
ENSAMXG00000040149	-	69	49.489	ENSORLG00000030436	-	97	48.436	Oryzias_latipes
ENSAMXG00000040149	-	91	44.483	ENSORLG00000030124	-	96	45.674	Oryzias_latipes
ENSAMXG00000040149	-	92	44.308	ENSORLG00000022696	-	99	44.384	Oryzias_latipes
ENSAMXG00000040149	-	70	49.726	ENSORLG00000027877	-	97	49.909	Oryzias_latipes
ENSAMXG00000040149	-	70	49.453	ENSORLG00000024848	-	96	49.545	Oryzias_latipes
ENSAMXG00000040149	-	92	44.877	ENSORLG00000022308	-	99	45.020	Oryzias_latipes
ENSAMXG00000040149	-	92	44.771	ENSORLG00000026705	-	99	44.710	Oryzias_latipes
ENSAMXG00000040149	-	93	45.697	ENSORLG00000029674	-	99	46.054	Oryzias_latipes
ENSAMXG00000040149	-	69	50.187	ENSORLG00000024241	-	99	50.141	Oryzias_latipes
ENSAMXG00000040149	-	92	44.627	ENSORLG00000024952	-	99	44.703	Oryzias_latipes
ENSAMXG00000040149	-	92	44.945	ENSORLG00000023585	-	99	44.966	Oryzias_latipes
ENSAMXG00000040149	-	70	50.000	ENSORLG00000028742	-	97	50.138	Oryzias_latipes
ENSAMXG00000040149	-	65	47.727	ENSORLG00000024316	-	99	47.727	Oryzias_latipes
ENSAMXG00000040149	-	70	48.537	ENSORLG00000027415	-	99	48.449	Oryzias_latipes
ENSAMXG00000040149	-	65	51.622	ENSORLG00000022683	-	99	51.485	Oryzias_latipes
ENSAMXG00000040149	-	62	53.154	ENSORLG00000025119	-	99	53.251	Oryzias_latipes
ENSAMXG00000040149	-	91	46.573	ENSORLG00000023008	-	99	46.583	Oryzias_latipes
ENSAMXG00000040149	-	65	51.133	ENSORLG00000027596	-	94	50.925	Oryzias_latipes
ENSAMXG00000040149	-	69	51.165	ENSORLG00000024198	-	99	51.176	Oryzias_latipes
ENSAMXG00000040149	-	92	45.007	ENSORLG00000023643	-	96	45.082	Oryzias_latipes
ENSAMXG00000040149	-	90	45.215	ENSORLG00000030165	-	94	46.249	Oryzias_latipes
ENSAMXG00000040149	-	57	53.735	ENSORLG00000027523	-	98	53.735	Oryzias_latipes
ENSAMXG00000040149	-	66	50.145	ENSORLG00000024925	-	99	50.544	Oryzias_latipes
ENSAMXG00000040149	-	71	49.550	ENSORLG00000029873	-	97	49.461	Oryzias_latipes
ENSAMXG00000040149	-	77	45.124	ENSORLG00000029044	-	91	44.922	Oryzias_latipes
ENSAMXG00000040149	-	92	45.007	ENSORLG00000024838	-	96	45.082	Oryzias_latipes
ENSAMXG00000040149	-	70	50.274	ENSORLG00000025100	-	97	50.274	Oryzias_latipes
ENSAMXG00000040149	-	66	48.263	ENSORLG00000025105	-	99	48.263	Oryzias_latipes
ENSAMXG00000040149	-	91	44.552	ENSORLG00000026965	-	96	45.745	Oryzias_latipes
ENSAMXG00000040149	-	65	50.891	ENSORLG00000025220	-	99	51.133	Oryzias_latipes
ENSAMXG00000040149	-	79	45.028	ENSORLG00000026506	-	95	44.830	Oryzias_latipes
ENSAMXG00000040149	-	62	53.257	ENSORLG00000027753	-	99	53.354	Oryzias_latipes
ENSAMXG00000040149	-	79	43.800	ENSORLG00000027932	-	91	43.819	Oryzias_latipes
ENSAMXG00000040149	-	92	45.467	ENSORLG00000022229	-	99	45.542	Oryzias_latipes
ENSAMXG00000040149	-	87	46.749	ENSORLG00000022552	-	99	45.020	Oryzias_latipes
ENSAMXG00000040149	-	62	52.371	ENSORLG00020021845	-	99	52.263	Oryzias_latipes_hni
ENSAMXG00000040149	-	65	50.692	ENSORLG00020005114	-	95	50.692	Oryzias_latipes_hni
ENSAMXG00000040149	-	61	53.319	ENSORLG00020013042	-	97	53.417	Oryzias_latipes_hni
ENSAMXG00000040149	-	53	52.433	ENSORLG00020001657	-	95	52.433	Oryzias_latipes_hni
ENSAMXG00000040149	-	70	46.374	ENSORLG00020017439	-	100	46.911	Oryzias_latipes_hni
ENSAMXG00000040149	-	93	45.765	ENSORLG00020021168	-	99	46.122	Oryzias_latipes_hni
ENSAMXG00000040149	-	91	44.245	ENSORLG00020001553	-	95	45.344	Oryzias_latipes_hni
ENSAMXG00000040149	-	91	44.621	ENSORLG00020008167	-	96	45.816	Oryzias_latipes_hni
ENSAMXG00000040149	-	86	45.084	ENSORLG00020003499	-	93	46.125	Oryzias_latipes_hni
ENSAMXG00000040149	-	92	44.490	ENSORLG00020000745	-	99	44.634	Oryzias_latipes_hni
ENSAMXG00000040149	-	91	44.728	ENSORLG00020011809	-	96	45.816	Oryzias_latipes_hni
ENSAMXG00000040149	-	70	49.954	ENSORLG00020011308	-	92	50.137	Oryzias_latipes_hni
ENSAMXG00000040149	-	78	43.974	ENSORLG00020014566	-	95	44.049	Oryzias_latipes_hni
ENSAMXG00000040149	-	75	48.797	ENSORLG00020005485	-	99	48.477	Oryzias_latipes_hni
ENSAMXG00000040149	-	84	49.543	ENSORLG00020005141	-	95	49.543	Oryzias_latipes_hni
ENSAMXG00000040149	-	93	45.765	ENSORLG00020003988	-	99	46.122	Oryzias_latipes_hni
ENSAMXG00000040149	-	93	46.018	ENSORLG00020020735	-	99	46.375	Oryzias_latipes_hni
ENSAMXG00000040149	-	92	44.945	ENSORLG00020013601	-	99	45.089	Oryzias_latipes_hni
ENSAMXG00000040149	-	70	49.817	ENSORLG00020004934	-	97	49.909	Oryzias_latipes_hni
ENSAMXG00000040149	-	91	44.621	ENSORLG00020000947	-	96	45.816	Oryzias_latipes_hni
ENSAMXG00000040149	-	89	44.507	ENSORLG00020009070	-	95	45.520	Oryzias_latipes_hni
ENSAMXG00000040149	-	71	50.000	ENSORLG00020011789	-	93	50.229	Oryzias_latipes_hni
ENSAMXG00000040149	-	67	50.095	ENSORLG00020003377	-	89	49.906	Oryzias_latipes_hni
ENSAMXG00000040149	-	92	45.336	ENSORLG00015006303	-	99	45.380	Oryzias_latipes_hsok
ENSAMXG00000040149	-	88	49.088	ENSORLG00015011577	-	98	49.180	Oryzias_latipes_hsok
ENSAMXG00000040149	-	87	44.760	ENSORLG00015014929	-	99	44.880	Oryzias_latipes_hsok
ENSAMXG00000040149	-	66	51.895	ENSORLG00015020941	-	97	51.794	Oryzias_latipes_hsok
ENSAMXG00000040149	-	79	43.499	ENSORLG00015009802	-	92	43.429	Oryzias_latipes_hsok
ENSAMXG00000040149	-	84	44.771	ENSORLG00015019144	-	99	44.846	Oryzias_latipes_hsok
ENSAMXG00000040149	-	80	42.982	ENSORLG00015022412	-	95	42.914	Oryzias_latipes_hsok
ENSAMXG00000040149	-	69	49.545	ENSORLG00015018042	-	87	49.771	Oryzias_latipes_hsok
ENSAMXG00000040149	-	87	45.448	ENSORLG00015021620	-	88	45.389	Oryzias_latipes_hsok
ENSAMXG00000040149	-	92	44.809	ENSORLG00015008912	-	99	44.952	Oryzias_latipes_hsok
ENSAMXG00000040149	-	68	50.283	ENSORLG00015020866	-	97	50.283	Oryzias_latipes_hsok
ENSAMXG00000040149	-	92	44.513	ENSORLG00015016198	-	99	44.701	Oryzias_latipes_hsok
ENSAMXG00000040149	-	70	50.248	ENSORLG00015005993	-	87	50.248	Oryzias_latipes_hsok
ENSAMXG00000040149	-	92	44.877	ENSORLG00015022083	-	99	44.952	Oryzias_latipes_hsok
ENSAMXG00000040149	-	62	50.360	ENSORLG00015021573	-	99	50.360	Oryzias_latipes_hsok
ENSAMXG00000040149	-	71	49.878	ENSORLG00015010438	-	96	49.878	Oryzias_latipes_hsok
ENSAMXG00000040149	-	75	50.372	ENSORLG00015010296	-	79	50.372	Oryzias_latipes_hsok
ENSAMXG00000040149	-	73	47.537	ENSORLG00015019527	-	99	47.537	Oryzias_latipes_hsok
ENSAMXG00000040149	-	87	48.077	ENSORLG00015019969	-	99	45.537	Oryzias_latipes_hsok
ENSAMXG00000040149	-	92	44.581	ENSORLG00015021482	-	99	44.769	Oryzias_latipes_hsok
ENSAMXG00000040149	-	65	49.411	ENSORLG00015001210	-	95	49.084	Oryzias_latipes_hsok
ENSAMXG00000040149	-	93	45.455	ENSOMEG00000022422	-	99	45.603	Oryzias_melastigma
ENSAMXG00000040149	-	71	52.256	ENSOMEG00000010967	-	85	52.256	Oryzias_melastigma
ENSAMXG00000040149	-	55	51.512	ENSOMEG00000005417	-	98	51.512	Oryzias_melastigma
ENSAMXG00000040149	-	87	52.177	ENSOMEG00000017119	-	90	52.281	Oryzias_melastigma
ENSAMXG00000040149	-	66	52.004	ENSOMEG00000013280	-	98	52.127	Oryzias_melastigma
ENSAMXG00000040149	-	60	52.733	ENSOMEG00000011861	-	99	52.733	Oryzias_melastigma
ENSAMXG00000040149	-	63	53.846	ENSOMEG00000011112	-	97	53.846	Oryzias_melastigma
ENSAMXG00000040149	-	61	57.046	ENSOMEG00000006056	-	87	57.002	Oryzias_melastigma
ENSAMXG00000040149	-	82	49.846	ENSOMEG00000007684	-	94	50.881	Oryzias_melastigma
ENSAMXG00000040149	-	75	46.849	ENSOMEG00000008259	-	96	47.619	Oryzias_melastigma
ENSAMXG00000040149	-	76	50.377	ENSPKIG00000009885	-	98	50.291	Paramormyrops_kingsleyae
ENSAMXG00000040149	-	75	49.659	ENSPKIG00000005143	-	99	50.085	Paramormyrops_kingsleyae
ENSAMXG00000040149	-	58	52.464	ENSPFOG00000022857	-	99	52.464	Poecilia_formosa
ENSAMXG00000040149	-	69	51.389	ENSPMEG00000022292	-	99	51.622	Poecilia_mexicana
ENSAMXG00000040149	-	64	52.000	ENSPREG00000005745	-	99	52.000	Poecilia_reticulata
ENSAMXG00000040149	-	79	46.825	ENSSDUG00000012982	-	99	46.508	Seriola_dumerili
ENSAMXG00000040149	-	67	53.713	ENSSLDG00000016219	-	96	54.393	Seriola_lalandi_dorsalis
ENSAMXG00000040149	-	67	44.142	ENSSPUG00000017371	-	90	44.330	Sphenodon_punctatus
ENSAMXG00000040149	-	93	44.603	ENSXCOG00000000074	-	99	44.955	Xiphophorus_couchianus