EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040163 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1083 bases
Position: chr2:26683439-26684521
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028068	RVT_1	PF00078.27	2.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042876	-	1083	-	ENSAMXP00000028068	360 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040163	-	98	30.959	ENSAMXG00000033666	-	64	30.959
ENSAMXG00000040163	-	98	30.471	ENSAMXG00000040899	-	87	30.471
ENSAMXG00000040163	-	98	30.685	ENSAMXG00000033268	-	87	30.685
ENSAMXG00000040163	-	99	34.167	ENSAMXG00000042595	-	86	34.167
ENSAMXG00000040163	-	99	35.000	ENSAMXG00000029344	-	86	35.000
ENSAMXG00000040163	-	98	30.623	ENSAMXG00000038747	-	72	30.623
ENSAMXG00000040163	-	93	31.124	ENSAMXG00000037500	-	63	31.124
ENSAMXG00000040163	-	88	38.750	ENSAMXG00000033695	-	70	38.750
ENSAMXG00000040163	-	97	30.791	ENSAMXG00000034565	-	92	30.791
ENSAMXG00000040163	-	50	30.601	ENSAMXG00000033682	-	50	30.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040163	-	98	30.226	ENSAPEG00000016754	-	86	30.226	Amphiprion_percula
ENSAMXG00000040163	-	80	30.479	ENSACLG00000026433	-	64	30.479	Astatotilapia_calliptera
ENSAMXG00000040163	-	99	40.166	ENSACLG00000006988	-	53	40.166	Astatotilapia_calliptera
ENSAMXG00000040163	-	63	32.314	ENSACLG00000026307	-	61	32.314	Astatotilapia_calliptera
ENSAMXG00000040163	-	53	34.737	ENSACLG00000001254	-	86	30.418	Astatotilapia_calliptera
ENSAMXG00000040163	-	96	30.172	ENSACLG00000019219	-	75	30.172	Astatotilapia_calliptera
ENSAMXG00000040163	-	54	34.021	ENSACLG00000016290	-	61	34.021	Astatotilapia_calliptera
ENSAMXG00000040163	-	74	43.233	ENSACLG00000021422	-	67	43.233	Astatotilapia_calliptera
ENSAMXG00000040163	-	99	40.443	ENSACLG00000016231	-	62	40.443	Astatotilapia_calliptera
ENSAMXG00000040163	-	70	31.128	ENSACLG00000008558	-	53	31.128	Astatotilapia_calliptera
ENSAMXG00000040163	-	64	32.751	ENSACLG00000009848	-	51	32.751	Astatotilapia_calliptera
ENSAMXG00000040163	-	55	30.348	ENSCPBG00000019838	-	53	30.348	Chrysemys_picta_bellii
ENSAMXG00000040163	-	51	32.258	ENSCPBG00000010221	-	60	32.258	Chrysemys_picta_bellii
ENSAMXG00000040163	-	53	30.570	ENSCPBG00000002827	-	68	30.570	Chrysemys_picta_bellii
ENSAMXG00000040163	-	52	34.555	ENSEBUG00000000391	-	53	34.555	Eptatretus_burgeri
ENSAMXG00000040163	-	59	30.374	ENSGAGG00000011675	-	67	30.374	Gopherus_agassizii
ENSAMXG00000040163	-	52	30.108	ENSGAGG00000022655	-	69	30.108	Gopherus_agassizii
ENSAMXG00000040163	-	59	30.374	ENSGAGG00000022089	-	50	30.374	Gopherus_agassizii
ENSAMXG00000040163	-	70	32.669	ENSHBUG00000000067	-	64	32.669	Haplochromis_burtoni
ENSAMXG00000040163	-	83	30.000	ENSLBEG00000008627	-	53	30.000	Labrus_bergylta
ENSAMXG00000040163	-	79	33.217	ENSMZEG00005019949	-	76	33.217	Maylandia_zebra
ENSAMXG00000040163	-	53	36.842	ENSMALG00000021355	-	73	36.842	Monopterus_albus
ENSAMXG00000040163	-	62	47.085	ENSMALG00000009397	-	56	47.085	Monopterus_albus
ENSAMXG00000040163	-	69	34.677	ENSMALG00000009608	-	54	34.677	Monopterus_albus
ENSAMXG00000040163	-	85	31.511	ENSMALG00000006226	-	80	31.511	Monopterus_albus
ENSAMXG00000040163	-	99	30.000	ENSMALG00000008286	-	61	30.000	Monopterus_albus
ENSAMXG00000040163	-	92	30.240	ENSMALG00000012850	-	95	30.240	Monopterus_albus
ENSAMXG00000040163	-	99	30.000	ENSMALG00000021030	-	61	30.000	Monopterus_albus
ENSAMXG00000040163	-	53	39.474	ENSMALG00000000456	-	50	39.474	Monopterus_albus
ENSAMXG00000040163	-	68	34.959	ENSMALG00000009771	-	63	34.959	Monopterus_albus
ENSAMXG00000040163	-	96	30.659	ENSMALG00000018635	-	68	30.946	Monopterus_albus
ENSAMXG00000040163	-	99	30.000	ENSMALG00000003303	-	67	30.000	Monopterus_albus
ENSAMXG00000040163	-	99	30.000	ENSMALG00000007425	-	61	30.000	Monopterus_albus
ENSAMXG00000040163	-	61	52.968	ENSORLG00000022088	-	85	52.968	Oryzias_latipes
ENSAMXG00000040163	-	87	30.573	ENSORLG00000026969	-	58	30.573	Oryzias_latipes
ENSAMXG00000040163	-	87	30.573	ENSORLG00000025899	-	58	30.573	Oryzias_latipes
ENSAMXG00000040163	-	70	33.202	ENSORLG00000030573	-	58	33.202	Oryzias_latipes
ENSAMXG00000040163	-	98	30.423	ENSORLG00000024850	-	87	30.423	Oryzias_latipes
ENSAMXG00000040163	-	99	39.178	ENSORLG00000025054	-	63	40.000	Oryzias_latipes
ENSAMXG00000040163	-	87	30.573	ENSORLG00020019661	-	58	30.573	Oryzias_latipes_hni
ENSAMXG00000040163	-	100	56.389	ENSORLG00020009835	-	78	56.389	Oryzias_latipes_hni
ENSAMXG00000040163	-	55	33.668	ENSORLG00020016658	-	59	33.668	Oryzias_latipes_hni
ENSAMXG00000040163	-	100	56.111	ENSORLG00020009687	-	64	56.111	Oryzias_latipes_hni
ENSAMXG00000040163	-	58	55.502	ENSORLG00020011701	-	50	55.502	Oryzias_latipes_hni
ENSAMXG00000040163	-	99	37.912	ENSORLG00020019816	-	68	37.912	Oryzias_latipes_hni
ENSAMXG00000040163	-	83	30.435	ENSORLG00020002243	-	71	30.435	Oryzias_latipes_hni
ENSAMXG00000040163	-	59	33.333	ENSORLG00015021158	-	60	33.333	Oryzias_latipes_hsok
ENSAMXG00000040163	-	77	32.609	ENSORLG00015005738	-	66	32.609	Oryzias_latipes_hsok
ENSAMXG00000040163	-	99	31.302	ENSORLG00015007551	-	83	31.302	Oryzias_latipes_hsok
ENSAMXG00000040163	-	92	39.640	ENSORLG00015020629	-	51	39.640	Oryzias_latipes_hsok
ENSAMXG00000040163	-	97	30.312	ENSORLG00015016179	-	84	30.312	Oryzias_latipes_hsok
ENSAMXG00000040163	-	53	33.684	ENSORLG00015019882	-	76	33.684	Oryzias_latipes_hsok
ENSAMXG00000040163	-	100	55.525	ENSORLG00015017651	-	82	55.525	Oryzias_latipes_hsok
ENSAMXG00000040163	-	99	39.167	ENSOMEG00000001970	-	71	39.167	Oryzias_melastigma
ENSAMXG00000040163	-	96	30.172	ENSOMEG00000008180	-	61	30.172	Oryzias_melastigma
ENSAMXG00000040163	-	99	30.000	ENSOMEG00000012318	-	91	30.000	Oryzias_melastigma
ENSAMXG00000040163	-	53	30.729	ENSPKIG00000017464	-	60	31.280	Paramormyrops_kingsleyae
ENSAMXG00000040163	-	50	47.486	ENSPKIG00000018770	-	74	47.486	Paramormyrops_kingsleyae
ENSAMXG00000040163	-	74	30.075	ENSPKIG00000006601	-	59	30.075	Paramormyrops_kingsleyae
ENSAMXG00000040163	-	59	32.870	ENSPKIG00000005006	-	59	32.870	Paramormyrops_kingsleyae
ENSAMXG00000040163	-	59	31.776	ENSPKIG00000018399	-	51	31.776	Paramormyrops_kingsleyae
ENSAMXG00000040163	-	59	30.374	ENSPSIG00000001446	-	52	30.374	Pelodiscus_sinensis
ENSAMXG00000040163	-	53	30.366	ENSPSIG00000002038	-	65	30.366	Pelodiscus_sinensis
ENSAMXG00000040163	-	50	31.667	ENSPSIG00000001058	-	51	31.667	Pelodiscus_sinensis
ENSAMXG00000040163	-	53	30.890	ENSPSIG00000001253	-	67	30.890	Pelodiscus_sinensis
ENSAMXG00000040163	-	83	30.100	ENSPNYG00000010168	-	52	30.100	Pundamilia_nyererei