EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040198 (Gene tree)
Gene ID: 103034593
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 502-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4553 bases
Position: chr7:24511686-24516238
Accession: 103034593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	1	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	2	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	3	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	4	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	5	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	6	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	7	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	8	9
ENSAMXP00000043916	zf-C2H2	PF00096.26	3.4e-45	9	9
ENSAMXP00000043916	zf-met	PF12874.7	7.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044732	-	2289	XM_007229739	ENSAMXP00000043916	763 (aa)	XP_007229801	-

Gene Model

Click here to download ENSAMXG00000040198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040198	-	51	35.156	ENSAMXG00000032718	si:ch211-154o6.2	56	35.156
ENSAMXG00000040198	-	50	41.584	ENSAMXG00000037699	-	56	41.584
ENSAMXG00000040198	-	52	36.364	ENSAMXG00000035525	znf646	60	36.364
ENSAMXG00000040198	-	50	41.883	ENSAMXG00000031794	-	99	41.883
ENSAMXG00000040198	-	98	33.856	ENSAMXG00000017199	-	99	39.412
ENSAMXG00000040198	-	53	40.594	ENSAMXG00000034454	si:ch211-236k19.4	58	40.594
ENSAMXG00000040198	-	50	44.444	ENSAMXG00000029518	-	51	36.735
ENSAMXG00000040198	-	65	38.039	ENSAMXG00000007973	-	90	39.269
ENSAMXG00000040198	-	57	41.799	ENSAMXG00000030659	-	95	41.799
ENSAMXG00000040198	-	55	36.404	ENSAMXG00000035967	znf384l	68	35.754
ENSAMXG00000040198	-	51	50.588	ENSAMXG00000033124	-	72	50.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040198	-	55	44.366	ENSCPBG00000001526	-	89	44.366	Chrysemys_picta_bellii
ENSAMXG00000040198	-	50	45.370	ENSCSAVG00000010960	-	100	45.370	Ciona_savignyi
ENSAMXG00000040198	-	55	41.049	ENSEBUG00000005264	-	96	41.049	Eptatretus_burgeri
ENSAMXG00000040198	-	52	43.333	ENSEBUG00000011435	-	99	43.333	Eptatretus_burgeri
ENSAMXG00000040198	-	59	30.369	ENSEBUG00000015837	-	93	30.369	Eptatretus_burgeri
ENSAMXG00000040198	-	55	45.926	ENSGALG00000044069	-	74	44.444	Gallus_gallus
ENSAMXG00000040198	-	50	43.860	ENSGAGG00000011399	-	95	43.011	Gopherus_agassizii
ENSAMXG00000040198	-	51	42.809	ENSGAGG00000018885	-	81	42.140	Gopherus_agassizii
ENSAMXG00000040198	-	50	44.040	ENSIPUG00000015468	-	92	44.333	Ictalurus_punctatus
ENSAMXG00000040198	-	50	42.675	ENSLACG00000022211	-	93	42.675	Latimeria_chalumnae
ENSAMXG00000040198	-	60	33.405	ENSNGAG00000015777	Zim1	82	33.405	Nannospalax_galili
ENSAMXG00000040198	-	50	48.315	ENSNBRG00000007276	-	79	48.315	Neolamprologus_brichardi
ENSAMXG00000040198	-	54	44.079	ENSSFOG00015019818	-	86	44.079	Scleropages_formosus
ENSAMXG00000040198	-	72	39.286	ENSTRUG00000022066	-	90	37.342	Takifugu_rubripes