EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040224 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1720 bases
Position: chr16:39014473-39016192
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000049079	RRM_5	PF13893.6	1.3e-11	1	2
ENSAMXP00000049079	RRM_5	PF13893.6	1.3e-11	2	2
ENSAMXP00000049079	RRM_1	PF00076.22	2.6e-26	1	2
ENSAMXP00000049079	RRM_1	PF00076.22	2.6e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046228	-	723	-	ENSAMXP00000049079	240 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040224	rbm4.3	64	42.405	ENSAMXG00000025173	-	58	39.896
ENSAMXG00000040224	rbm4.3	63	51.799	ENSAMXG00000032121	rbm4.2	87	51.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040224	rbm4.3	73	75.419	ENSAPOG00000002991	rbm4.3	53	77.654	Acanthochromis_polyacanthus
ENSAMXG00000040224	rbm4.3	82	76.961	ENSAPOG00000002953	rbm4.3	61	76.777	Acanthochromis_polyacanthus
ENSAMXG00000040224	rbm4.3	82	73.039	ENSACIG00000021311	-	62	75.355	Amphilophus_citrinellus
ENSAMXG00000040224	rbm4.3	73	73.743	ENSACIG00000021295	rbm4.3	52	75.419	Amphilophus_citrinellus
ENSAMXG00000040224	rbm4.3	82	76.961	ENSAOCG00000008015	rbm4.3	61	76.777	Amphiprion_ocellaris
ENSAMXG00000040224	rbm4.3	73	74.860	ENSAOCG00000007992	rbm4.3	53	76.536	Amphiprion_ocellaris
ENSAMXG00000040224	rbm4.3	82	76.961	ENSAPEG00000017324	rbm4.3	61	76.777	Amphiprion_percula
ENSAMXG00000040224	rbm4.3	73	74.860	ENSAPEG00000017288	rbm4.3	53	76.536	Amphiprion_percula
ENSAMXG00000040224	rbm4.3	82	74.510	ENSATEG00000019375	rbm4.3	61	76.777	Anabas_testudineus
ENSAMXG00000040224	rbm4.3	73	73.333	ENSATEG00000019395	rbm4.3	54	75.000	Anabas_testudineus
ENSAMXG00000040224	rbm4.3	73	73.184	ENSACLG00000010642	rbm4.3	52	74.302	Astatotilapia_calliptera
ENSAMXG00000040224	rbm4.3	82	73.529	ENSACLG00000010620	-	62	75.829	Astatotilapia_calliptera
ENSAMXG00000040224	rbm4.3	68	79.882	ENSCSEG00000013659	rbm4.3	54	77.778	Cynoglossus_semilaevis
ENSAMXG00000040224	rbm4.3	61	76.190	ENSCVAG00000008502	rbm4.3	53	70.718	Cyprinodon_variegatus
ENSAMXG00000040224	rbm4.3	82	74.500	ENSCVAG00000008508	rbm4.3	61	75.238	Cyprinodon_variegatus
ENSAMXG00000040224	rbm4.3	81	80.513	ENSDARG00000022129	rbm4.3	62	82.547	Danio_rerio
ENSAMXG00000040224	rbm4.3	85	75.238	ENSELUG00000022168	rbm4.3	60	77.143	Esox_lucius
ENSAMXG00000040224	rbm4.3	79	75.648	ENSELUG00000022150	rbm4.3	55	75.393	Esox_lucius
ENSAMXG00000040224	rbm4.3	76	78.191	ENSELUG00000022155	rbm4.3	55	77.604	Esox_lucius
ENSAMXG00000040224	rbm4.3	82	73.762	ENSFHEG00000023137	rbm4.3	66	74.762	Fundulus_heteroclitus
ENSAMXG00000040224	rbm4.3	63	76.821	ENSFHEG00000023096	rbm4.3	53	69.565	Fundulus_heteroclitus
ENSAMXG00000040224	rbm4.3	70	70.760	ENSGMOG00000004032	rbm4.3	52	63.033	Gadus_morhua
ENSAMXG00000040224	rbm4.3	63	72.848	ENSGAFG00000001935	rbm4.3	55	67.956	Gambusia_affinis
ENSAMXG00000040224	rbm4.3	73	71.508	ENSGACG00000019980	rbm4.3	52	73.743	Gasterosteus_aculeatus
ENSAMXG00000040224	rbm4.3	73	73.184	ENSHBUG00000009051	rbm4.3	52	74.302	Haplochromis_burtoni
ENSAMXG00000040224	rbm4.3	82	73.529	ENSHBUG00000009020	-	62	75.829	Haplochromis_burtoni
ENSAMXG00000040224	rbm4.3	82	72.000	ENSHCOG00000010349	rbm4.3	60	73.077	Hippocampus_comes
ENSAMXG00000040224	rbm4.3	62	73.154	ENSHCOG00000010363	rbm4.3	51	66.484	Hippocampus_comes
ENSAMXG00000040224	rbm4.3	77	84.409	ENSIPUG00000022943	RBM4B	54	84.492	Ictalurus_punctatus
ENSAMXG00000040224	rbm4.3	77	76.596	ENSKMAG00000017468	rbm4.3	56	77.660	Kryptolebias_marmoratus
ENSAMXG00000040224	rbm4.3	63	84.058	ENSKMAG00000017456	rbm4.3	95	84.058	Kryptolebias_marmoratus
ENSAMXG00000040224	rbm4.3	63	74.000	ENSKMAG00000014541	rbm4.3	52	68.681	Kryptolebias_marmoratus
ENSAMXG00000040224	rbm4.3	73	71.111	ENSLBEG00000001025	rbm4.3	82	71.111	Labrus_bergylta
ENSAMXG00000040224	rbm4.3	82	71.707	ENSLBEG00000001071	-	61	75.472	Labrus_bergylta
ENSAMXG00000040224	rbm4.3	78	69.744	ENSLOCG00000002755	rbm4.3	51	70.103	Lepisosteus_oculatus
ENSAMXG00000040224	rbm4.3	73	73.743	ENSMAMG00000004701	rbm4.3	53	75.419	Mastacembelus_armatus
ENSAMXG00000040224	rbm4.3	82	73.529	ENSMAMG00000004715	-	51	75.829	Mastacembelus_armatus
ENSAMXG00000040224	rbm4.3	73	73.184	ENSMZEG00005028540	rbm4.3	52	74.302	Maylandia_zebra
ENSAMXG00000040224	rbm4.3	82	68.500	ENSMZEG00005028537	-	57	68.599	Maylandia_zebra
ENSAMXG00000040224	rbm4.3	82	67.647	ENSMZEG00005007417	-	61	71.226	Maylandia_zebra
ENSAMXG00000040224	rbm4.3	80	70.466	ENSMMOG00000012143	rbm4.3	96	79.532	Mola_mola
ENSAMXG00000040224	rbm4.3	73	70.166	ENSMMOG00000012191	rbm4.3	53	70.166	Mola_mola
ENSAMXG00000040224	rbm4.3	78	78.534	ENSMALG00000003001	rbm4.3	57	80.105	Monopterus_albus
ENSAMXG00000040224	rbm4.3	73	73.034	ENSMALG00000003032	rbm4.3	56	73.596	Monopterus_albus
ENSAMXG00000040224	rbm4.3	73	73.034	ENSMALG00000015014	-	53	73.596	Monopterus_albus
ENSAMXG00000040224	rbm4.3	73	72.626	ENSNBRG00000012372	rbm4.3	52	74.302	Neolamprologus_brichardi
ENSAMXG00000040224	rbm4.3	82	73.529	ENSONIG00000018380	-	62	75.829	Oreochromis_niloticus
ENSAMXG00000040224	rbm4.3	73	73.184	ENSONIG00000018378	rbm4.3	52	74.860	Oreochromis_niloticus
ENSAMXG00000040224	rbm4.3	77	69.072	ENSORLG00000012473	rbm4.3	56	69.588	Oryzias_latipes
ENSAMXG00000040224	rbm4.3	77	70.103	ENSORLG00000011589	rbm4.3	56	70.619	Oryzias_latipes
ENSAMXG00000040224	rbm4.3	78	62.694	ENSORLG00000024749	rbm4.3	56	64.249	Oryzias_latipes
ENSAMXG00000040224	rbm4.3	77	69.588	ENSORLG00020012474	rbm4.3	56	70.103	Oryzias_latipes_hni
ENSAMXG00000040224	rbm4.3	77	69.072	ENSORLG00020012464	rbm4.3	56	69.588	Oryzias_latipes_hni
ENSAMXG00000040224	rbm4.3	78	62.694	ENSORLG00020012482	rbm4.3	57	64.249	Oryzias_latipes_hni
ENSAMXG00000040224	rbm4.3	77	70.619	ENSORLG00015013698	rbm4.3	56	71.134	Oryzias_latipes_hsok
ENSAMXG00000040224	rbm4.3	77	68.557	ENSORLG00015013686	rbm4.3	56	69.072	Oryzias_latipes_hsok
ENSAMXG00000040224	rbm4.3	78	63.731	ENSORLG00015013721	rbm4.3	57	65.285	Oryzias_latipes_hsok
ENSAMXG00000040224	rbm4.3	61	77.551	ENSOMEG00000021202	-	92	75.817	Oryzias_melastigma
ENSAMXG00000040224	rbm4.3	82	68.269	ENSOMEG00000005929	rbm4.3	62	70.370	Oryzias_melastigma
ENSAMXG00000040224	rbm4.3	82	67.788	ENSOMEG00000005918	rbm4.3	62	69.444	Oryzias_melastigma
ENSAMXG00000040224	rbm4.3	81	64.103	ENSOMEG00000005950	rbm4.3	57	68.182	Oryzias_melastigma
ENSAMXG00000040224	rbm4.3	78	77.083	ENSPKIG00000007001	rbm4.3	70	80.473	Paramormyrops_kingsleyae
ENSAMXG00000040224	rbm4.3	66	42.236	ENSPKIG00000007274	-	61	37.915	Paramormyrops_kingsleyae
ENSAMXG00000040224	rbm4.3	63	70.548	ENSPMGG00000005450	-	79	70.548	Periophthalmus_magnuspinnatus
ENSAMXG00000040224	rbm4.3	70	76.744	ENSPLAG00000006131	rbm4.3	54	76.596	Poecilia_latipinna
ENSAMXG00000040224	rbm4.3	63	75.497	ENSPLAG00000006077	rbm4.3	52	69.780	Poecilia_latipinna
ENSAMXG00000040224	rbm4.3	65	82.051	ENSPLAG00000006107	rbm4.3	90	82.051	Poecilia_latipinna
ENSAMXG00000040224	rbm4.3	63	75.497	ENSPMEG00000024260	rbm4.3	52	70.166	Poecilia_mexicana
ENSAMXG00000040224	rbm4.3	82	76.000	ENSPMEG00000024263	rbm4.3	61	76.190	Poecilia_mexicana
ENSAMXG00000040224	rbm4.3	70	76.744	ENSPMEG00000024271	rbm4.3	54	76.596	Poecilia_mexicana
ENSAMXG00000040224	rbm4.3	73	69.061	ENSPREG00000002093	-	52	70.166	Poecilia_reticulata
ENSAMXG00000040224	rbm4.3	70	76.744	ENSPREG00000002156	rbm4.3	58	76.596	Poecilia_reticulata
ENSAMXG00000040224	rbm4.3	73	73.184	ENSPNYG00000018564	rbm4.3	52	74.302	Pundamilia_nyererei
ENSAMXG00000040224	rbm4.3	82	73.529	ENSPNYG00000018541	rbm4.3	62	75.829	Pundamilia_nyererei
ENSAMXG00000040224	rbm4.3	64	43.038	ENSPNAG00000012130	-	56	41.579	Pygocentrus_nattereri
ENSAMXG00000040224	rbm4.3	78	90.476	ENSPNAG00000013053	rbm4.3	53	90.426	Pygocentrus_nattereri
ENSAMXG00000040224	rbm4.3	78	77.487	ENSSFOG00015015563	rbm4.3	53	77.487	Scleropages_formosus
ENSAMXG00000040224	rbm4.3	70	73.256	ENSSMAG00000013653	rbm4.3	59	66.667	Scophthalmus_maximus
ENSAMXG00000040224	rbm4.3	78	78.534	ENSSMAG00000013644	rbm4.3	55	78.534	Scophthalmus_maximus
ENSAMXG00000040224	rbm4.3	82	74.020	ENSSDUG00000018435	rbm4.3	61	76.777	Seriola_dumerili
ENSAMXG00000040224	rbm4.3	73	73.333	ENSSDUG00000018422	rbm4.3	53	74.444	Seriola_dumerili
ENSAMXG00000040224	rbm4.3	73	72.778	ENSSLDG00000017182	rbm4.3	53	74.444	Seriola_lalandi_dorsalis
ENSAMXG00000040224	rbm4.3	82	74.020	ENSSLDG00000017204	rbm4.3	61	76.777	Seriola_lalandi_dorsalis
ENSAMXG00000040224	rbm4.3	82	75.980	ENSSPAG00000008062	rbm4.3	61	75.829	Stegastes_partitus
ENSAMXG00000040224	rbm4.3	63	76.159	ENSTRUG00000023874	rbm4.3	53	71.823	Takifugu_rubripes
ENSAMXG00000040224	rbm4.3	82	73.786	ENSTRUG00000020901	rbm4.3	61	73.709	Takifugu_rubripes
ENSAMXG00000040224	rbm4.3	82	75.000	ENSTNIG00000005668	rbm4.3	63	73.934	Tetraodon_nigroviridis
ENSAMXG00000040224	rbm4.3	82	75.000	ENSXCOG00000006001	rbm4.3	61	75.238	Xiphophorus_couchianus
ENSAMXG00000040224	rbm4.3	63	82.000	ENSXCOG00000006010	rbm4.3	93	82.000	Xiphophorus_couchianus
ENSAMXG00000040224	rbm4.3	61	74.830	ENSXCOG00000005996	rbm4.3	52	70.166	Xiphophorus_couchianus
ENSAMXG00000040224	rbm4.3	85	74.163	ENSXMAG00000021997	rbm4.3	61	75.238	Xiphophorus_maculatus
ENSAMXG00000040224	rbm4.3	61	74.830	ENSXMAG00000025173	rbm4.3	52	70.166	Xiphophorus_maculatus
ENSAMXG00000040224	rbm4.3	70	77.326	ENSXMAG00000011698	rbm4.3	54	77.128	Xiphophorus_maculatus