EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040335 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1693 bases
Position: chr10:4830162-4831854
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048582	RVT_1	PF00078.27	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033004	-	456	-	ENSAMXP00000048582	151 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040335	-	89	64.029	ENSAMXG00000037304	-	79	64.029
ENSAMXG00000040335	-	71	67.200	ENSAMXG00000033175	-	75	67.200
ENSAMXG00000040335	-	80	79.710	ENSAMXG00000039074	-	67	79.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040335	-	60	40.187	ENSSFOG00015000049	-	54	40.187	Scleropages_formosus