EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000040366 (Gene tree)
Gene ID: 103042921
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6835 bases
Position: chr24:16775266-16782100
Accession: 103042921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034279	MTS	PF05175.14	2.2e-05	1	1
ENSAMXP00000034279	Met_10	PF02475.16	1.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052157	-	3499	XM_007232889	ENSAMXP00000034279	422 (aa)	XP_007232951	UPI000BBD54E2

Gene Model

Click here to download ENSAMXG00000040366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040366	trmt12	97	51.651	ENSG00000183665	TRMT12	93	51.651	Homo_sapiens
ENSAMXG00000040366	trmt12	99	57.143	ENSAPOG00000011979	trmt12	99	57.143	Acanthochromis_polyacanthus
ENSAMXG00000040366	trmt12	99	52.459	ENSAMEG00000019612	TRMT12	95	52.459	Ailuropoda_melanoleuca
ENSAMXG00000040366	trmt12	95	56.716	ENSACIG00000012982	trmt12	99	56.716	Amphilophus_citrinellus
ENSAMXG00000040366	trmt12	99	56.667	ENSAOCG00000020570	trmt12	99	57.393	Amphiprion_ocellaris
ENSAMXG00000040366	trmt12	99	56.429	ENSAPEG00000006335	trmt12	99	57.143	Amphiprion_percula
ENSAMXG00000040366	trmt12	99	57.381	ENSATEG00000018316	trmt12	99	57.381	Anabas_testudineus
ENSAMXG00000040366	trmt12	99	56.667	ENSACLG00000001008	trmt12	99	56.667	Astatotilapia_calliptera
ENSAMXG00000040366	trmt12	97	52.758	ENSBTAG00000020398	TRMT12	90	52.758	Bos_taurus
ENSAMXG00000040366	trmt12	54	39.565	WBGene00009586	F40F9.10	54	37.500	Caenorhabditis_elegans
ENSAMXG00000040366	trmt12	99	49.655	ENSCJAG00000022174	TRMT12	95	49.655	Callithrix_jacchus
ENSAMXG00000040366	trmt12	97	51.765	ENSCAFG00000001040	TRMT12	95	51.765	Canis_familiaris
ENSAMXG00000040366	trmt12	97	51.765	ENSCAFG00020006500	TRMT12	95	51.765	Canis_lupus_dingo
ENSAMXG00000040366	trmt12	97	53.349	ENSCHIG00000016574	TRMT12	95	53.349	Capra_hircus
ENSAMXG00000040366	trmt12	99	50.943	ENSCPOG00000026520	TRMT12	95	50.943	Cavia_porcellus
ENSAMXG00000040366	trmt12	99	49.885	ENSCSAG00000018615	TRMT12	95	49.885	Chlorocebus_sabaeus
ENSAMXG00000040366	trmt12	99	50.000	ENSCPBG00000014290	TRMT12	95	50.000	Chrysemys_picta_bellii
ENSAMXG00000040366	trmt12	72	46.254	ENSCING00000019633	-	97	46.254	Ciona_intestinalis
ENSAMXG00000040366	trmt12	78	42.857	ENSCSAVG00000000415	-	98	43.478	Ciona_savignyi
ENSAMXG00000040366	trmt12	97	51.208	ENSCGRG00001014834	Trmt12	95	51.208	Cricetulus_griseus_chok1gshd
ENSAMXG00000040366	trmt12	99	55.952	ENSCSEG00000002675	trmt12	95	55.952	Cynoglossus_semilaevis
ENSAMXG00000040366	trmt12	99	55.476	ENSCVAG00000005590	trmt12	99	55.476	Cyprinodon_variegatus
ENSAMXG00000040366	trmt12	99	64.833	ENSDARG00000060338	trmt12	99	67.491	Danio_rerio
ENSAMXG00000040366	trmt12	98	51.415	ENSETEG00000009373	TRMT12	94	51.415	Echinops_telfairi
ENSAMXG00000040366	trmt12	97	52.246	ENSEASG00005022441	TRMT12	95	52.246	Equus_asinus_asinus
ENSAMXG00000040366	trmt12	99	49.423	ENSEEUG00000004844	TRMT12	95	49.423	Erinaceus_europaeus
ENSAMXG00000040366	trmt12	99	60.570	ENSELUG00000004240	trmt12	100	61.183	Esox_lucius
ENSAMXG00000040366	trmt12	66	57.093	ENSFALG00000003825	TRMT12	93	65.686	Ficedula_albicollis
ENSAMXG00000040366	trmt12	99	50.585	ENSFDAG00000016647	TRMT12	97	50.585	Fukomys_damarensis
ENSAMXG00000040366	trmt12	93	47.980	ENSFHEG00000017338	trmt12	96	47.980	Fundulus_heteroclitus
ENSAMXG00000040366	trmt12	82	54.674	ENSGALG00000006773	TRMT12	77	54.674	Gallus_gallus
ENSAMXG00000040366	trmt12	99	55.714	ENSGAFG00000020056	trmt12	99	55.714	Gambusia_affinis
ENSAMXG00000040366	trmt12	96	55.198	ENSGACG00000017351	trmt12	100	55.198	Gasterosteus_aculeatus
ENSAMXG00000040366	trmt12	99	52.064	ENSGAGG00000006032	TRMT12	98	52.064	Gopherus_agassizii
ENSAMXG00000040366	trmt12	99	56.667	ENSHBUG00000016412	trmt12	99	56.667	Haplochromis_burtoni
ENSAMXG00000040366	trmt12	99	51.636	ENSHGLG00000020498	TRMT12	97	51.636	Heterocephalus_glaber_female
ENSAMXG00000040366	trmt12	99	51.522	ENSHGLG00100020132	TRMT12	97	51.522	Heterocephalus_glaber_male
ENSAMXG00000040366	trmt12	99	52.857	ENSHCOG00000005050	trmt12	99	57.183	Hippocampus_comes
ENSAMXG00000040366	trmt12	100	70.379	ENSIPUG00000018011	trmt12	92	70.379	Ictalurus_punctatus
ENSAMXG00000040366	trmt12	97	51.551	ENSSTOG00000030617	TRMT12	97	50.701	Ictidomys_tridecemlineatus
ENSAMXG00000040366	trmt12	99	56.501	ENSKMAG00000000891	trmt12	100	56.501	Kryptolebias_marmoratus
ENSAMXG00000040366	trmt12	99	57.381	ENSLBEG00000028712	trmt12	99	57.381	Labrus_bergylta
ENSAMXG00000040366	trmt12	54	67.686	ENSLBEG00000017456	-	88	67.686	Labrus_bergylta
ENSAMXG00000040366	trmt12	99	53.023	ENSLACG00000015869	TRMT12	96	53.023	Latimeria_chalumnae
ENSAMXG00000040366	trmt12	99	54.245	ENSLOCG00000015290	trmt12	99	54.245	Lepisosteus_oculatus
ENSAMXG00000040366	trmt12	97	52.153	ENSLAFG00000012519	TRMT12	95	52.153	Loxodonta_africana
ENSAMXG00000040366	trmt12	99	49.885	ENSMMUG00000015490	TRMT12	96	49.885	Macaca_mulatta
ENSAMXG00000040366	trmt12	99	58.907	ENSMAMG00000020311	trmt12	99	58.907	Mastacembelus_armatus
ENSAMXG00000040366	trmt12	99	56.667	ENSMZEG00005007349	trmt12	99	56.667	Maylandia_zebra
ENSAMXG00000040366	trmt12	99	50.827	ENSMGAG00000004174	TRMT12	95	50.827	Meleagris_gallopavo
ENSAMXG00000040366	trmt12	99	56.057	ENSMMOG00000000412	trmt12	100	56.057	Mola_mola
ENSAMXG00000040366	trmt12	97	48.780	ENSMODG00000011798	-	85	48.780	Monodelphis_domestica
ENSAMXG00000040366	trmt12	97	49.024	ENSMODG00000021403	-	93	49.024	Monodelphis_domestica
ENSAMXG00000040366	trmt12	99	55.952	ENSMALG00000008668	trmt12	99	55.952	Monopterus_albus
ENSAMXG00000040366	trmt12	97	51.537	MGP_CAROLIEiJ_G0019820	Trmt12	93	51.537	Mus_caroli
ENSAMXG00000040366	trmt12	97	52.358	ENSMUSG00000037085	Trmt12	93	52.358	Mus_musculus
ENSAMXG00000040366	trmt12	97	53.717	MGP_PahariEiJ_G0019829	Trmt12	93	53.717	Mus_pahari
ENSAMXG00000040366	trmt12	97	52.123	MGP_SPRETEiJ_G0020717	Trmt12	93	52.123	Mus_spretus
ENSAMXG00000040366	trmt12	97	52.000	ENSMPUG00000019150	TRMT12	93	52.000	Mustela_putorius_furo
ENSAMXG00000040366	trmt12	97	51.196	ENSMLUG00000003753	TRMT12	95	51.196	Myotis_lucifugus
ENSAMXG00000040366	trmt12	97	50.474	ENSNGAG00000014548	Trmt12	95	50.474	Nannospalax_galili
ENSAMXG00000040366	trmt12	99	57.957	ENSNBRG00000021510	trmt12	99	57.957	Neolamprologus_brichardi
ENSAMXG00000040366	trmt12	99	47.786	ENSOPRG00000008067	TRMT12	96	47.786	Ochotona_princeps
ENSAMXG00000040366	trmt12	99	50.467	ENSODEG00000018933	TRMT12	97	50.467	Octodon_degus
ENSAMXG00000040366	trmt12	99	57.857	ENSONIG00000002614	trmt12	99	57.857	Oreochromis_niloticus
ENSAMXG00000040366	trmt12	97	50.000	ENSOANG00000009987	TRMT12	96	50.000	Ornithorhynchus_anatinus
ENSAMXG00000040366	trmt12	99	48.485	ENSOCUG00000026379	TRMT12	95	48.485	Oryctolagus_cuniculus
ENSAMXG00000040366	trmt12	99	54.048	ENSORLG00000001280	trmt12	99	54.286	Oryzias_latipes
ENSAMXG00000040366	trmt12	99	53.810	ENSORLG00020000708	trmt12	99	54.048	Oryzias_latipes_hni
ENSAMXG00000040366	trmt12	99	53.810	ENSORLG00015012344	trmt12	99	53.810	Oryzias_latipes_hsok
ENSAMXG00000040366	trmt12	99	54.502	ENSOMEG00000015267	trmt12	98	54.502	Oryzias_melastigma
ENSAMXG00000040366	trmt12	97	52.029	ENSOGAG00000015845	TRMT12	95	52.029	Otolemur_garnettii
ENSAMXG00000040366	trmt12	99	58.531	ENSPKIG00000004640	trmt12	99	58.531	Paramormyrops_kingsleyae
ENSAMXG00000040366	trmt12	60	58.889	ENSPSIG00000003476	TRMT12	99	58.889	Pelodiscus_sinensis
ENSAMXG00000040366	trmt12	99	53.919	ENSPMGG00000016356	trmt12	97	53.919	Periophthalmus_magnuspinnatus
ENSAMXG00000040366	trmt12	99	48.325	ENSPCIG00000002967	TRMT12	87	48.325	Phascolarctos_cinereus
ENSAMXG00000040366	trmt12	95	56.079	ENSPFOG00000016931	trmt12	94	56.079	Poecilia_formosa
ENSAMXG00000040366	trmt12	99	55.476	ENSPLAG00000020621	trmt12	99	55.476	Poecilia_latipinna
ENSAMXG00000040366	trmt12	99	56.190	ENSPMEG00000000818	trmt12	99	56.190	Poecilia_mexicana
ENSAMXG00000040366	trmt12	99	55.952	ENSPREG00000011621	trmt12	99	56.190	Poecilia_reticulata
ENSAMXG00000040366	trmt12	99	50.463	ENSPPYG00000018866	TRMT12	95	50.463	Pongo_abelii
ENSAMXG00000040366	trmt12	97	52.392	ENSPCAG00000000556	TRMT12	93	52.392	Procavia_capensis
ENSAMXG00000040366	trmt12	97	52.632	ENSPVAG00000009149	TRMT12	93	52.632	Pteropus_vampyrus
ENSAMXG00000040366	trmt12	95	56.468	ENSPNYG00000010696	trmt12	99	56.468	Pundamilia_nyererei
ENSAMXG00000040366	trmt12	100	74.764	ENSPNAG00000019028	trmt12	100	74.764	Pygocentrus_nattereri
ENSAMXG00000040366	trmt12	97	53.110	ENSRNOG00000008978	Trmt12	95	53.110	Rattus_norvegicus
ENSAMXG00000040366	trmt12	99	47.847	ENSSHAG00000003345	TRMT12	94	47.847	Sarcophilus_harrisii
ENSAMXG00000040366	trmt12	99	55.269	ENSSFOG00015006090	trmt12	99	55.269	Scleropages_formosus
ENSAMXG00000040366	trmt12	99	58.195	ENSSMAG00000013247	trmt12	100	58.195	Scophthalmus_maximus
ENSAMXG00000040366	trmt12	99	58.571	ENSSDUG00000006168	trmt12	99	58.571	Seriola_dumerili
ENSAMXG00000040366	trmt12	99	58.571	ENSSLDG00000025007	trmt12	99	58.571	Seriola_lalandi_dorsalis
ENSAMXG00000040366	trmt12	99	48.961	ENSSPUG00000005321	TRMT12	95	48.961	Sphenodon_punctatus
ENSAMXG00000040366	trmt12	99	57.381	ENSSPAG00000009435	trmt12	97	57.381	Stegastes_partitus
ENSAMXG00000040366	trmt12	99	48.936	ENSTGUG00000002280	TRMT12	99	48.936	Taeniopygia_guttata
ENSAMXG00000040366	trmt12	99	57.007	ENSTRUG00000011548	trmt12	99	57.007	Takifugu_rubripes
ENSAMXG00000040366	trmt12	99	56.308	ENSTNIG00000016866	trmt12	99	56.308	Tetraodon_nigroviridis
ENSAMXG00000040366	trmt12	97	51.643	ENSUAMG00000002067	TRMT12	96	51.643	Ursus_americanus
ENSAMXG00000040366	trmt12	97	53.349	ENSVPAG00000006519	TRMT12	93	53.349	Vicugna_pacos
ENSAMXG00000040366	trmt12	99	50.461	ENSVVUG00000016790	TRMT12	95	50.461	Vulpes_vulpes
ENSAMXG00000040366	trmt12	99	49.048	ENSXETG00000009641	trmt12	96	49.048	Xenopus_tropicalis
ENSAMXG00000040366	trmt12	99	56.028	ENSXCOG00000016505	trmt12	99	56.028	Xiphophorus_couchianus
ENSAMXG00000040366	trmt12	99	56.532	ENSXMAG00000025318	trmt12	99	56.532	Xiphophorus_maculatus