EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040471 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1953 bases
Position: chr10:19390924-19392876
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000027393	RVT_1	PF00078.27	1.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000029916	-	1953	-	ENSAMXP00000027393	650 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040471	-	70	32.794	ENSAMXG00000041465	-	66	32.794
ENSAMXG00000040471	-	74	48.871	ENSAMXG00000043892	-	58	48.676
ENSAMXG00000040471	-	54	35.211	ENSAMXG00000031032	-	94	35.211
ENSAMXG00000040471	-	71	31.967	ENSAMXG00000043631	-	59	31.967
ENSAMXG00000040471	-	62	36.496	ENSAMXG00000038502	-	83	36.496
ENSAMXG00000040471	-	77	31.919	ENSAMXG00000042777	-	71	31.919
ENSAMXG00000040471	-	60	32.692	ENSAMXG00000038480	-	58	32.692
ENSAMXG00000040471	-	59	33.159	ENSAMXG00000039106	-	75	33.159
ENSAMXG00000040471	-	51	32.759	ENSAMXG00000033786	-	60	32.759
ENSAMXG00000040471	-	71	31.967	ENSAMXG00000030761	-	64	31.967
ENSAMXG00000040471	-	61	33.890	ENSAMXG00000037637	-	70	33.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040471	-	54	35.127	ENSAPOG00000008925	-	98	35.127	Acanthochromis_polyacanthus
ENSAMXG00000040471	-	60	43.478	ENSAOCG00000003030	-	54	43.108	Amphiprion_ocellaris
ENSAMXG00000040471	-	71	34.647	ENSAPEG00000002572	-	50	34.647	Amphiprion_percula
ENSAMXG00000040471	-	50	35.474	ENSAPEG00000005752	-	78	35.474	Amphiprion_percula
ENSAMXG00000040471	-	69	32.743	ENSAPEG00000014949	-	68	32.196	Amphiprion_percula
ENSAMXG00000040471	-	67	32.391	ENSAPEG00000006765	-	71	32.391	Amphiprion_percula
ENSAMXG00000040471	-	71	32.454	ENSACLG00000012278	-	63	32.454	Astatotilapia_calliptera
ENSAMXG00000040471	-	56	31.436	ENSACLG00000009861	-	74	31.436	Astatotilapia_calliptera
ENSAMXG00000040471	-	66	33.775	ENSACLG00000005847	-	62	33.775	Astatotilapia_calliptera
ENSAMXG00000040471	-	69	31.452	ENSACLG00000005526	-	59	31.452	Astatotilapia_calliptera
ENSAMXG00000040471	-	70	35.065	ENSACLG00000001380	-	78	35.065	Astatotilapia_calliptera
ENSAMXG00000040471	-	65	34.895	ENSACLG00000013847	-	97	34.895	Astatotilapia_calliptera
ENSAMXG00000040471	-	66	40.553	ENSACLG00000020385	-	75	40.553	Astatotilapia_calliptera
ENSAMXG00000040471	-	71	40.851	ENSACLG00000014740	-	55	40.851	Astatotilapia_calliptera
ENSAMXG00000040471	-	52	36.283	ENSACLG00000007712	-	59	36.283	Astatotilapia_calliptera
ENSAMXG00000040471	-	57	33.777	ENSCPBG00000001119	-	82	33.777	Chrysemys_picta_bellii
ENSAMXG00000040471	-	90	39.696	ENSCPBG00000001369	-	98	39.696	Chrysemys_picta_bellii
ENSAMXG00000040471	-	66	33.030	ENSCING00000021231	-	52	33.030	Ciona_intestinalis
ENSAMXG00000040471	-	76	32.016	ENSCVAG00000019870	-	68	32.016	Cyprinodon_variegatus
ENSAMXG00000040471	-	64	35.952	ENSGAGG00000007173	-	65	35.952	Gopherus_agassizii
ENSAMXG00000040471	-	64	36.190	ENSGAGG00000022002	-	50	36.190	Gopherus_agassizii
ENSAMXG00000040471	-	60	34.177	ENSGAGG00000011063	-	82	34.177	Gopherus_agassizii
ENSAMXG00000040471	-	90	42.051	ENSGAGG00000013650	-	97	42.051	Gopherus_agassizii
ENSAMXG00000040471	-	86	40.885	ENSGAGG00000007552	-	82	40.885	Gopherus_agassizii
ENSAMXG00000040471	-	98	40.031	ENSGAGG00000002613	-	82	40.031	Gopherus_agassizii
ENSAMXG00000040471	-	56	36.240	ENSHBUG00000009088	-	100	36.240	Haplochromis_burtoni
ENSAMXG00000040471	-	63	36.562	ENSHCOG00000019997	-	74	36.562	Hippocampus_comes
ENSAMXG00000040471	-	64	32.000	ENSIPUG00000003645	-	86	32.000	Ictalurus_punctatus
ENSAMXG00000040471	-	72	36.211	ENSKMAG00000013568	-	60	36.211	Kryptolebias_marmoratus
ENSAMXG00000040471	-	54	36.056	ENSKMAG00000007574	-	70	36.056	Kryptolebias_marmoratus
ENSAMXG00000040471	-	56	36.339	ENSKMAG00000003188	-	51	36.339	Kryptolebias_marmoratus
ENSAMXG00000040471	-	56	36.088	ENSLBEG00000003912	-	93	36.088	Labrus_bergylta
ENSAMXG00000040471	-	61	31.841	ENSLACG00000002169	-	64	31.841	Latimeria_chalumnae
ENSAMXG00000040471	-	71	32.983	ENSLACG00000006151	-	59	32.983	Latimeria_chalumnae
ENSAMXG00000040471	-	71	32.196	ENSLACG00000009168	-	56	33.333	Latimeria_chalumnae
ENSAMXG00000040471	-	60	33.911	ENSLACG00000008450	-	53	33.911	Latimeria_chalumnae
ENSAMXG00000040471	-	64	35.867	ENSLACG00000015201	-	72	35.867	Latimeria_chalumnae
ENSAMXG00000040471	-	61	34.321	ENSLACG00000009347	-	65	34.321	Latimeria_chalumnae
ENSAMXG00000040471	-	50	31.902	ENSLACG00000017143	-	52	31.902	Latimeria_chalumnae
ENSAMXG00000040471	-	56	33.245	ENSLACG00000006413	-	54	33.245	Latimeria_chalumnae
ENSAMXG00000040471	-	53	35.817	ENSLACG00000012109	-	60	35.817	Latimeria_chalumnae
ENSAMXG00000040471	-	67	41.055	ENSLACG00000003991	-	50	41.055	Latimeria_chalumnae
ENSAMXG00000040471	-	50	33.639	ENSLOCG00000017292	-	99	33.639	Lepisosteus_oculatus
ENSAMXG00000040471	-	72	34.737	ENSMAMG00000019918	-	78	34.737	Mastacembelus_armatus
ENSAMXG00000040471	-	67	35.076	ENSMAMG00000016004	-	69	35.076	Mastacembelus_armatus
ENSAMXG00000040471	-	66	42.857	ENSMZEG00005008378	-	63	41.810	Maylandia_zebra
ENSAMXG00000040471	-	56	31.436	ENSMZEG00005023829	-	74	31.436	Maylandia_zebra
ENSAMXG00000040471	-	70	33.814	ENSMZEG00005017878	-	74	33.814	Maylandia_zebra
ENSAMXG00000040471	-	69	31.250	ENSMZEG00005004899	-	60	31.250	Maylandia_zebra
ENSAMXG00000040471	-	77	38.310	ENSMZEG00005024252	-	59	38.310	Maylandia_zebra
ENSAMXG00000040471	-	52	36.578	ENSNBRG00000002477	-	99	36.578	Neolamprologus_brichardi
ENSAMXG00000040471	-	65	35.280	ENSORLG00000027231	-	81	35.280	Oryzias_latipes
ENSAMXG00000040471	-	71	33.811	ENSORLG00000024878	-	50	33.811	Oryzias_latipes
ENSAMXG00000040471	-	64	33.971	ENSORLG00000027443	-	70	33.971	Oryzias_latipes
ENSAMXG00000040471	-	68	33.925	ENSORLG00000027869	-	97	33.925	Oryzias_latipes
ENSAMXG00000040471	-	56	35.676	ENSORLG00020016924	-	87	35.676	Oryzias_latipes_hni
ENSAMXG00000040471	-	58	40.576	ENSORLG00020016695	-	51	40.576	Oryzias_latipes_hni
ENSAMXG00000040471	-	56	36.856	ENSORLG00020000154	-	91	36.856	Oryzias_latipes_hni
ENSAMXG00000040471	-	65	36.977	ENSORLG00020002002	-	68	36.977	Oryzias_latipes_hni
ENSAMXG00000040471	-	66	41.055	ENSORLG00020001433	-	59	41.055	Oryzias_latipes_hni
ENSAMXG00000040471	-	60	36.272	ENSORLG00020012706	-	100	36.272	Oryzias_latipes_hni
ENSAMXG00000040471	-	55	34.160	ENSORLG00020016252	-	93	34.160	Oryzias_latipes_hni
ENSAMXG00000040471	-	65	35.116	ENSORLG00020009127	-	85	35.116	Oryzias_latipes_hni
ENSAMXG00000040471	-	56	35.501	ENSORLG00020009084	-	50	35.501	Oryzias_latipes_hni
ENSAMXG00000040471	-	69	34.361	ENSORLG00020019030	-	53	34.361	Oryzias_latipes_hni
ENSAMXG00000040471	-	55	35.912	ENSORLG00015021822	-	97	35.946	Oryzias_latipes_hsok
ENSAMXG00000040471	-	65	33.178	ENSORLG00015013369	-	56	33.178	Oryzias_latipes_hsok
ENSAMXG00000040471	-	70	35.230	ENSORLG00015008138	-	87	35.230	Oryzias_latipes_hsok
ENSAMXG00000040471	-	61	40.955	ENSORLG00015013109	-	64	40.955	Oryzias_latipes_hsok
ENSAMXG00000040471	-	65	36.279	ENSORLG00015022314	-	51	36.279	Oryzias_latipes_hsok
ENSAMXG00000040471	-	61	34.586	ENSORLG00015009803	-	83	34.586	Oryzias_latipes_hsok
ENSAMXG00000040471	-	65	33.882	ENSOMEG00000013437	-	73	33.882	Oryzias_melastigma
ENSAMXG00000040471	-	70	31.004	ENSOMEG00000013073	-	74	31.004	Oryzias_melastigma
ENSAMXG00000040471	-	71	32.548	ENSOMEG00000005634	-	64	32.548	Oryzias_melastigma
ENSAMXG00000040471	-	61	42.714	ENSOMEG00000013479	-	65	42.714	Oryzias_melastigma
ENSAMXG00000040471	-	60	33.491	ENSPKIG00000012990	-	62	33.491	Paramormyrops_kingsleyae
ENSAMXG00000040471	-	61	35.000	ENSPKIG00000007140	-	91	35.000	Paramormyrops_kingsleyae
ENSAMXG00000040471	-	62	36.186	ENSPKIG00000015048	-	59	36.186	Paramormyrops_kingsleyae
ENSAMXG00000040471	-	70	32.623	ENSPKIG00000005406	-	77	32.623	Paramormyrops_kingsleyae
ENSAMXG00000040471	-	81	33.761	ENSPKIG00000013778	-	73	33.761	Paramormyrops_kingsleyae
ENSAMXG00000040471	-	53	40.580	ENSPSIG00000001249	-	99	40.580	Pelodiscus_sinensis
ENSAMXG00000040471	-	62	46.040	ENSPSIG00000001197	-	99	46.040	Pelodiscus_sinensis
ENSAMXG00000040471	-	94	35.877	ENSPSIG00000001614	-	82	35.877	Pelodiscus_sinensis
ENSAMXG00000040471	-	61	43.750	ENSPSIG00000001800	-	89	43.750	Pelodiscus_sinensis
ENSAMXG00000040471	-	66	38.479	ENSPSIG00000000226	-	84	38.530	Pelodiscus_sinensis
ENSAMXG00000040471	-	61	43.284	ENSPSIG00000001757	-	99	43.284	Pelodiscus_sinensis
ENSAMXG00000040471	-	61	41.791	ENSPSIG00000000367	-	92	41.791	Pelodiscus_sinensis
ENSAMXG00000040471	-	62	43.350	ENSPSIG00000001205	-	87	43.350	Pelodiscus_sinensis
ENSAMXG00000040471	-	61	44.361	ENSPSIG00000000193	-	79	44.361	Pelodiscus_sinensis
ENSAMXG00000040471	-	95	35.588	ENSPSIG00000001150	-	77	35.588	Pelodiscus_sinensis
ENSAMXG00000040471	-	60	35.516	ENSPMEG00000018862	-	80	35.516	Poecilia_mexicana
ENSAMXG00000040471	-	54	38.068	ENSPMEG00000017235	-	58	38.068	Poecilia_mexicana
ENSAMXG00000040471	-	61	41.562	ENSPREG00000006122	-	52	41.562	Poecilia_reticulata
ENSAMXG00000040471	-	56	36.458	ENSPREG00000006496	-	52	36.458	Poecilia_reticulata
ENSAMXG00000040471	-	52	34.513	ENSPREG00000022349	-	73	34.513	Poecilia_reticulata
ENSAMXG00000040471	-	55	38.719	ENSPNAG00000015949	-	93	38.719	Pygocentrus_nattereri
ENSAMXG00000040471	-	62	34.550	ENSPNAG00000010299	-	81	34.550	Pygocentrus_nattereri
ENSAMXG00000040471	-	58	33.246	ENSPNAG00000009058	-	76	33.246	Pygocentrus_nattereri
ENSAMXG00000040471	-	65	34.904	ENSSFOG00015024061	-	75	34.904	Scleropages_formosus
ENSAMXG00000040471	-	52	33.140	ENSSPAG00000008169	-	56	33.140	Stegastes_partitus
ENSAMXG00000040471	-	60	35.696	ENSTRUG00000024803	-	76	35.696	Takifugu_rubripes
ENSAMXG00000040471	-	53	34.758	ENSXMAG00000023507	-	68	34.758	Xiphophorus_maculatus
ENSAMXG00000040471	-	50	37.462	ENSXMAG00000025957	-	57	37.462	Xiphophorus_maculatus