EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040498 (Gene tree)
Gene ID: 103029670
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 26710 bases
Position: chrAPWO02000086.1:735142-761851
Accession: 103029670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000000699	RRM_5	PF13893.6	1.8e-12	1	2
ENSAMXP00000000699	RRM_5	PF13893.6	1.8e-12	2	2
ENSAMXP00000035462	RRM_5	PF13893.6	2e-12	1	2
ENSAMXP00000035462	RRM_5	PF13893.6	2e-12	2	2
ENSAMXP00000048761	RRM_5	PF13893.6	2.4e-12	1	2
ENSAMXP00000048761	RRM_5	PF13893.6	2.4e-12	2	2
ENSAMXP00000000699	RRM_1	PF00076.22	1.7e-64	1	3
ENSAMXP00000000699	RRM_1	PF00076.22	1.7e-64	2	3
ENSAMXP00000000699	RRM_1	PF00076.22	1.7e-64	3	3
ENSAMXP00000035462	RRM_1	PF00076.22	1.9e-64	1	3
ENSAMXP00000035462	RRM_1	PF00076.22	1.9e-64	2	3
ENSAMXP00000035462	RRM_1	PF00076.22	1.9e-64	3	3
ENSAMXP00000048761	RRM_1	PF00076.22	2.2e-64	1	3
ENSAMXP00000048761	RRM_1	PF00076.22	2.2e-64	2	3
ENSAMXP00000048761	RRM_1	PF00076.22	2.2e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000000699	-	1038	-	ENSAMXP00000000699	345 (aa)	-	W5JZD9
ENSAMXT00000043696	-	3102	XM_022667185	ENSAMXP00000048761	365 (aa)	XP_022522906	UPI0008149E47
ENSAMXT00000034448	-	3063	XM_022667189	ENSAMXP00000035462	352 (aa)	XP_022522910	UPI000BBDF5EE

Gene Model

Click here to download ENSAMXG00000040498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040498	elavl3	90	38.462	ENSAMXG00000038511	tial1	73	38.462
ENSAMXG00000040498	elavl3	98	84.438	ENSAMXG00000000687	elavl4	96	82.749
ENSAMXG00000040498	elavl3	84	36.496	ENSAMXG00000012489	celf3b	56	36.496
ENSAMXG00000040498	elavl3	66	38.333	ENSAMXG00000002146	rbms1a	51	38.333
ENSAMXG00000040498	elavl3	63	38.889	ENSAMXG00000002894	cirbpa	54	38.889
ENSAMXG00000040498	elavl3	90	37.179	ENSAMXG00000037884	tia1l	80	37.179
ENSAMXG00000040498	elavl3	92	37.349	ENSAMXG00000008599	pabpc1b	59	37.349
ENSAMXG00000040498	elavl3	78	42.553	ENSAMXG00000020576	celf1	54	42.553
ENSAMXG00000040498	elavl3	91	40.698	ENSAMXG00000012028	celf5b	57	40.698
ENSAMXG00000040498	elavl3	82	41.860	ENSAMXG00000007935	celf4	57	41.860
ENSAMXG00000040498	elavl3	98	36.145	ENSAMXG00000018779	pabpc4	57	36.145
ENSAMXG00000040498	elavl3	64	38.333	ENSAMXG00000043770	-	79	37.097
ENSAMXG00000040498	elavl3	90	72.258	ENSAMXG00000031223	elavl1a	91	72.258
ENSAMXG00000040498	elavl3	99	81.081	ENSAMXG00000036990	ELAVL2	94	81.081
ENSAMXG00000040498	elavl3	92	37.349	ENSAMXG00000018395	-	63	37.349
ENSAMXG00000040498	elavl3	97	69.412	ENSAMXG00000006391	elavl1b	95	71.914
ENSAMXG00000040498	elavl3	78	30.000	ENSAMXG00000005553	tra2a	90	35.484
ENSAMXG00000040498	elavl3	92	36.145	ENSAMXG00000013552	pabpc1l	60	36.145
ENSAMXG00000040498	elavl3	68	40.698	ENSAMXG00000034719	-	98	40.698
ENSAMXG00000040498	elavl3	94	35.938	ENSAMXG00000005933	celf2	73	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040498	elavl3	100	88.011	ENSG00000196361	ELAVL3	100	89.101	Homo_sapiens
ENSAMXG00000040498	elavl3	99	98.827	ENSAPOG00000017565	elavl3	99	98.827	Acanthochromis_polyacanthus
ENSAMXG00000040498	elavl3	99	86.517	ENSAMEG00000010487	ELAVL3	99	87.640	Ailuropoda_melanoleuca
ENSAMXG00000040498	elavl3	99	98.827	ENSACIG00000024190	elavl3	99	98.827	Amphilophus_citrinellus
ENSAMXG00000040498	elavl3	100	98.261	ENSAOCG00000005054	elavl3	100	98.261	Amphiprion_ocellaris
ENSAMXG00000040498	elavl3	100	98.261	ENSAPEG00000011145	elavl3	100	98.261	Amphiprion_percula
ENSAMXG00000040498	elavl3	98	99.410	ENSATEG00000020941	elavl3	99	99.410	Anabas_testudineus
ENSAMXG00000040498	elavl3	98	93.056	ENSACAG00000016958	ELAVL3	93	93.056	Anolis_carolinensis
ENSAMXG00000040498	elavl3	100	87.432	ENSANAG00000030798	ELAVL3	100	88.525	Aotus_nancymaae
ENSAMXG00000040498	elavl3	100	97.971	ENSACLG00000018260	elavl3	100	97.971	Astatotilapia_calliptera
ENSAMXG00000040498	elavl3	100	87.466	ENSBTAG00000014412	ELAVL3	100	88.556	Bos_taurus
ENSAMXG00000040498	elavl3	100	88.011	ENSCJAG00000005589	ELAVL3	100	89.101	Callithrix_jacchus
ENSAMXG00000040498	elavl3	100	88.011	ENSCAFG00000017350	ELAVL3	100	89.101	Canis_familiaris
ENSAMXG00000040498	elavl3	99	89.181	ENSCAFG00020004614	ELAVL3	99	88.859	Canis_lupus_dingo
ENSAMXG00000040498	elavl3	99	88.430	ENSCHIG00000003436	ELAVL3	99	89.532	Capra_hircus
ENSAMXG00000040498	elavl3	99	88.154	ENSTSYG00000036621	ELAVL3	99	89.256	Carlito_syrichta
ENSAMXG00000040498	elavl3	90	75.309	ENSCAPG00000017620	ELAVL3	99	76.543	Cavia_aperea
ENSAMXG00000040498	elavl3	90	75.309	ENSCPOG00000001793	ELAVL3	99	76.543	Cavia_porcellus
ENSAMXG00000040498	elavl3	100	88.011	ENSCCAG00000034350	ELAVL3	100	89.101	Cebus_capucinus
ENSAMXG00000040498	elavl3	100	88.011	ENSCATG00000044086	ELAVL3	100	89.101	Cercocebus_atys
ENSAMXG00000040498	elavl3	100	87.738	ENSCLAG00000016404	ELAVL3	100	88.828	Chinchilla_lanigera
ENSAMXG00000040498	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSAMXG00000040498	elavl3	99	92.105	ENSCPBG00000023982	ELAVL3	100	90.463	Chrysemys_picta_bellii
ENSAMXG00000040498	elavl3	100	88.011	ENSCANG00000038728	ELAVL3	100	89.101	Colobus_angolensis_palliatus
ENSAMXG00000040498	elavl3	100	87.466	ENSCGRG00001018927	Elavl3	100	88.556	Cricetulus_griseus_chok1gshd
ENSAMXG00000040498	elavl3	99	87.603	ENSCGRG00000007158	Elavl3	99	88.705	Cricetulus_griseus_crigri
ENSAMXG00000040498	elavl3	100	98.551	ENSCSEG00000021095	elavl3	100	98.551	Cynoglossus_semilaevis
ENSAMXG00000040498	elavl3	100	98.864	ENSCVAG00000014060	elavl3	100	98.864	Cyprinodon_variegatus
ENSAMXG00000040498	elavl3	100	98.551	ENSDARG00000014420	elavl3	100	98.551	Danio_rerio
ENSAMXG00000040498	elavl3	99	87.052	ENSDORG00000002538	Elavl3	99	88.154	Dipodomys_ordii
ENSAMXG00000040498	elavl3	51	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSAMXG00000040498	elavl3	100	88.011	ENSEASG00005004561	ELAVL3	100	89.101	Equus_asinus_asinus
ENSAMXG00000040498	elavl3	98	89.971	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSAMXG00000040498	elavl3	100	98.584	ENSELUG00000023043	elavl3	100	98.584	Esox_lucius
ENSAMXG00000040498	elavl3	100	88.011	ENSFCAG00000024763	ELAVL3	100	89.101	Felis_catus
ENSAMXG00000040498	elavl3	98	87.278	ENSFDAG00000008449	ELAVL3	98	87.278	Fukomys_damarensis
ENSAMXG00000040498	elavl3	100	98.261	ENSFHEG00000001675	elavl3	100	98.261	Fundulus_heteroclitus
ENSAMXG00000040498	elavl3	100	97.534	ENSGMOG00000003760	elavl3	100	97.534	Gadus_morhua
ENSAMXG00000040498	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSAMXG00000040498	elavl3	50	61.345	ENSGALG00000054488	-	77	63.636	Gallus_gallus
ENSAMXG00000040498	elavl3	99	97.238	ENSGAFG00000016015	elavl3	98	97.238	Gambusia_affinis
ENSAMXG00000040498	elavl3	99	98.854	ENSGACG00000013839	elavl3	99	98.854	Gasterosteus_aculeatus
ENSAMXG00000040498	elavl3	83	91.810	ENSGAGG00000016141	ELAVL3	99	91.770	Gopherus_agassizii
ENSAMXG00000040498	elavl3	99	88.154	ENSGGOG00000008635	ELAVL3	99	89.256	Gorilla_gorilla
ENSAMXG00000040498	elavl3	100	98.864	ENSHBUG00000020978	elavl3	100	98.864	Haplochromis_burtoni
ENSAMXG00000040498	elavl3	100	88.011	ENSHGLG00000015199	ELAVL3	100	89.101	Heterocephalus_glaber_female
ENSAMXG00000040498	elavl3	84	67.427	ENSHGLG00000019379	-	97	67.427	Heterocephalus_glaber_female
ENSAMXG00000040498	elavl3	95	86.533	ENSHGLG00100011200	ELAVL3	100	87.679	Heterocephalus_glaber_male
ENSAMXG00000040498	elavl3	100	99.148	ENSHCOG00000015894	elavl3	100	99.148	Hippocampus_comes
ENSAMXG00000040498	elavl3	100	97.708	ENSIPUG00000013002	elavl3	100	97.708	Ictalurus_punctatus
ENSAMXG00000040498	elavl3	100	88.011	ENSSTOG00000021111	ELAVL3	100	89.101	Ictidomys_tridecemlineatus
ENSAMXG00000040498	elavl3	99	88.981	ENSJJAG00000023513	Elavl3	99	88.981	Jaculus_jaculus
ENSAMXG00000040498	elavl3	99	98.827	ENSKMAG00000017412	elavl3	99	98.827	Kryptolebias_marmoratus
ENSAMXG00000040498	elavl3	99	98.827	ENSLBEG00000008073	elavl3	97	98.827	Labrus_bergylta
ENSAMXG00000040498	elavl3	100	97.808	ENSLOCG00000007647	elavl3	100	97.808	Lepisosteus_oculatus
ENSAMXG00000040498	elavl3	99	88.462	ENSLAFG00000005013	ELAVL3	99	89.560	Loxodonta_africana
ENSAMXG00000040498	elavl3	100	88.011	ENSMFAG00000003692	ELAVL3	100	89.101	Macaca_fascicularis
ENSAMXG00000040498	elavl3	100	88.011	ENSMMUG00000020616	ELAVL3	100	89.101	Macaca_mulatta
ENSAMXG00000040498	elavl3	100	87.738	ENSMNEG00000043973	ELAVL3	100	88.828	Macaca_nemestrina
ENSAMXG00000040498	elavl3	98	82.857	ENSMLEG00000013976	ELAVL3	100	82.857	Mandrillus_leucophaeus
ENSAMXG00000040498	elavl3	99	99.118	ENSMAMG00000011697	elavl3	99	99.118	Mastacembelus_armatus
ENSAMXG00000040498	elavl3	100	98.261	ENSMZEG00005019053	elavl3	100	98.261	Maylandia_zebra
ENSAMXG00000040498	elavl3	99	87.603	ENSMAUG00000016478	Elavl3	99	88.705	Mesocricetus_auratus
ENSAMXG00000040498	elavl3	99	88.462	ENSMICG00000016528	ELAVL3	99	89.560	Microcebus_murinus
ENSAMXG00000040498	elavl3	100	87.466	ENSMOCG00000002046	Elavl3	100	88.556	Microtus_ochrogaster
ENSAMXG00000040498	elavl3	99	98.827	ENSMMOG00000012154	elavl3	98	98.827	Mola_mola
ENSAMXG00000040498	elavl3	99	88.981	ENSMODG00000006653	ELAVL3	92	88.981	Monodelphis_domestica
ENSAMXG00000040498	elavl3	99	97.238	ENSMALG00000016659	elavl3	99	97.238	Monopterus_albus
ENSAMXG00000040498	elavl3	100	87.466	MGP_CAROLIEiJ_G0031894	Elavl3	100	88.579	Mus_caroli
ENSAMXG00000040498	elavl3	100	87.466	ENSMUSG00000003410	Elavl3	100	88.556	Mus_musculus
ENSAMXG00000040498	elavl3	100	87.193	MGP_PahariEiJ_G0014760	Elavl3	100	88.301	Mus_pahari
ENSAMXG00000040498	elavl3	51	82.727	MGP_SPRETEiJ_G0033017	-	51	82.609	Mus_spretus
ENSAMXG00000040498	elavl3	100	87.738	ENSMPUG00000005040	ELAVL3	100	88.828	Mustela_putorius_furo
ENSAMXG00000040498	elavl3	99	89.835	ENSMLUG00000016320	ELAVL3	99	89.835	Myotis_lucifugus
ENSAMXG00000040498	elavl3	100	88.011	ENSNGAG00000000968	Elavl3	100	89.101	Nannospalax_galili
ENSAMXG00000040498	elavl3	99	97.238	ENSNBRG00000010319	elavl3	99	97.238	Neolamprologus_brichardi
ENSAMXG00000040498	elavl3	99	92.011	ENSMEUG00000016706	ELAVL3	99	92.011	Notamacropus_eugenii
ENSAMXG00000040498	elavl3	84	89.316	ENSOPRG00000007373	ELAVL3	99	89.431	Ochotona_princeps
ENSAMXG00000040498	elavl3	100	88.011	ENSODEG00000015790	ELAVL3	100	89.101	Octodon_degus
ENSAMXG00000040498	elavl3	99	97.238	ENSONIG00000001538	elavl3	98	97.238	Oreochromis_niloticus
ENSAMXG00000040498	elavl3	94	92.460	ENSOANG00000015046	ELAVL3	98	92.460	Ornithorhynchus_anatinus
ENSAMXG00000040498	elavl3	100	96.986	ENSORLG00000005379	elavl3	100	96.986	Oryzias_latipes
ENSAMXG00000040498	elavl3	100	98.261	ENSORLG00020004570	elavl3	100	98.261	Oryzias_latipes_hni
ENSAMXG00000040498	elavl3	100	96.164	ENSORLG00015000662	elavl3	100	96.164	Oryzias_latipes_hsok
ENSAMXG00000040498	elavl3	100	98.261	ENSOMEG00000023959	elavl3	100	98.261	Oryzias_melastigma
ENSAMXG00000040498	elavl3	100	88.011	ENSOGAG00000007072	ELAVL3	100	89.101	Otolemur_garnettii
ENSAMXG00000040498	elavl3	100	88.283	ENSOARG00000018464	ELAVL3	100	89.373	Ovis_aries
ENSAMXG00000040498	elavl3	100	88.011	ENSPPAG00000033972	ELAVL3	100	89.101	Pan_paniscus
ENSAMXG00000040498	elavl3	100	88.011	ENSPPRG00000005151	ELAVL3	100	89.101	Panthera_pardus
ENSAMXG00000040498	elavl3	97	85.546	ENSPTIG00000013610	ELAVL3	97	86.726	Panthera_tigris_altaica
ENSAMXG00000040498	elavl3	100	88.011	ENSPTRG00000010506	ELAVL3	100	89.101	Pan_troglodytes
ENSAMXG00000040498	elavl3	100	88.011	ENSPANG00000005849	ELAVL3	100	89.101	Papio_anubis
ENSAMXG00000040498	elavl3	100	97.391	ENSPKIG00000016207	elavl3	100	97.391	Paramormyrops_kingsleyae
ENSAMXG00000040498	elavl3	100	98.261	ENSPMGG00000002016	elavl3	100	98.261	Periophthalmus_magnuspinnatus
ENSAMXG00000040498	elavl3	98	92.287	ENSPFOG00000007754	elavl3	100	92.287	Poecilia_formosa
ENSAMXG00000040498	elavl3	98	99.410	ENSPLAG00000001547	elavl3	99	99.410	Poecilia_latipinna
ENSAMXG00000040498	elavl3	98	99.410	ENSPMEG00000010156	elavl3	99	99.410	Poecilia_mexicana
ENSAMXG00000040498	elavl3	100	98.261	ENSPREG00000006971	elavl3	100	98.261	Poecilia_reticulata
ENSAMXG00000040498	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSAMXG00000040498	elavl3	83	86.842	ENSPCAG00000015952	ELAVL3	65	87.597	Procavia_capensis
ENSAMXG00000040498	elavl3	100	88.011	ENSPCOG00000023781	ELAVL3	100	89.101	Propithecus_coquereli
ENSAMXG00000040498	elavl3	100	88.011	ENSPVAG00000014893	ELAVL3	100	89.101	Pteropus_vampyrus
ENSAMXG00000040498	elavl3	100	97.971	ENSPNYG00000013186	elavl3	98	97.971	Pundamilia_nyererei
ENSAMXG00000040498	elavl3	100	100.000	ENSPNAG00000003633	elavl3	100	100.000	Pygocentrus_nattereri
ENSAMXG00000040498	elavl3	100	87.466	ENSRNOG00000013752	Elavl3	100	88.556	Rattus_norvegicus
ENSAMXG00000040498	elavl3	100	88.011	ENSRBIG00000034762	ELAVL3	100	89.101	Rhinopithecus_bieti
ENSAMXG00000040498	elavl3	89	88.000	ENSRROG00000034305	ELAVL3	97	89.286	Rhinopithecus_roxellana
ENSAMXG00000040498	elavl3	99	88.154	ENSSBOG00000030047	ELAVL3	100	90.705	Saimiri_boliviensis_boliviensis
ENSAMXG00000040498	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSAMXG00000040498	elavl3	98	94.379	ENSSFOG00015023630	elavl3	100	97.231	Scleropages_formosus
ENSAMXG00000040498	elavl3	99	99.706	ENSSMAG00000004671	elavl3	99	99.706	Scophthalmus_maximus
ENSAMXG00000040498	elavl3	99	98.827	ENSSDUG00000020708	elavl3	99	98.827	Seriola_dumerili
ENSAMXG00000040498	elavl3	100	98.864	ENSSLDG00000013769	elavl3	100	98.864	Seriola_lalandi_dorsalis
ENSAMXG00000040498	elavl3	99	78.297	ENSSARG00000005949	ELAVL3	99	79.396	Sorex_araneus
ENSAMXG00000040498	elavl3	99	98.827	ENSSPAG00000000990	elavl3	99	98.827	Stegastes_partitus
ENSAMXG00000040498	elavl3	100	88.011	ENSSSCG00000013617	ELAVL3	100	89.101	Sus_scrofa
ENSAMXG00000040498	elavl3	98	99.410	ENSTRUG00000010719	elavl3	99	99.410	Takifugu_rubripes
ENSAMXG00000040498	elavl3	99	96.438	ENSTNIG00000018572	elavl3	99	96.438	Tetraodon_nigroviridis
ENSAMXG00000040498	elavl3	97	82.515	ENSTBEG00000006133	ELAVL3	99	83.742	Tupaia_belangeri
ENSAMXG00000040498	elavl3	100	87.738	ENSTTRG00000001789	ELAVL3	100	88.828	Tursiops_truncatus
ENSAMXG00000040498	elavl3	97	90.149	ENSUAMG00000000405	ELAVL3	99	88.636	Ursus_americanus
ENSAMXG00000040498	elavl3	98	83.721	ENSUMAG00000019546	ELAVL3	88	85.050	Ursus_maritimus
ENSAMXG00000040498	elavl3	100	87.193	ENSVVUG00000023733	ELAVL3	100	88.283	Vulpes_vulpes
ENSAMXG00000040498	elavl3	99	91.837	ENSXETG00000016741	elavl3	99	91.837	Xenopus_tropicalis
ENSAMXG00000040498	elavl3	100	98.261	ENSXMAG00000018287	elavl3	100	98.261	Xiphophorus_maculatus