EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3555 bases
Position: chr12:14805457-14809011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039342	RVT_1	PF00078.27	1.4e-19	1	1
ENSAMXP00000039342	RNase_H	PF00075.24	4.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046125	-	3555	-	ENSAMXP00000039342	1184 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040526	-	99	36.760	ENSAMXG00000038047	-	90	36.198
ENSAMXG00000040526	-	99	36.595	ENSAMXG00000040932	-	92	36.033
ENSAMXG00000040526	-	74	45.902	ENSAMXG00000038483	-	71	45.902
ENSAMXG00000040526	-	85	32.316	ENSAMXG00000033455	-	85	32.344
ENSAMXG00000040526	-	86	37.440	ENSAMXG00000033060	-	87	37.536
ENSAMXG00000040526	-	50	32.335	ENSAMXG00000039473	-	50	32.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040526	-	73	36.947	ENSAPEG00000000438	-	98	36.637	Amphiprion_percula
ENSAMXG00000040526	-	52	37.152	ENSACLG00000005138	-	69	36.916	Astatotilapia_calliptera
ENSAMXG00000040526	-	86	35.795	ENSACLG00000014318	-	76	36.174	Astatotilapia_calliptera
ENSAMXG00000040526	-	97	33.220	ENSACLG00000003782	-	84	33.051	Astatotilapia_calliptera
ENSAMXG00000040526	-	98	32.523	ENSACLG00000023027	-	93	32.995	Astatotilapia_calliptera
ENSAMXG00000040526	-	98	32.775	ENSACLG00000006254	-	84	33.110	Astatotilapia_calliptera
ENSAMXG00000040526	-	76	36.314	ENSBTAG00000052165	-	91	36.314	Bos_taurus
ENSAMXG00000040526	-	64	33.768	ENSCPBG00000009921	-	97	33.768	Chrysemys_picta_bellii
ENSAMXG00000040526	-	78	43.697	ENSCPBG00000009184	-	99	43.603	Chrysemys_picta_bellii
ENSAMXG00000040526	-	96	32.900	ENSCSEG00000009059	-	91	32.900	Cynoglossus_semilaevis
ENSAMXG00000040526	-	96	32.900	ENSCSEG00000013867	-	91	32.900	Cynoglossus_semilaevis
ENSAMXG00000040526	-	93	55.903	ENSCSEG00000019226	-	62	55.268	Cynoglossus_semilaevis
ENSAMXG00000040526	-	96	32.900	ENSCSEG00000012922	-	91	32.900	Cynoglossus_semilaevis
ENSAMXG00000040526	-	96	32.900	ENSCSEG00000018136	-	91	32.900	Cynoglossus_semilaevis
ENSAMXG00000040526	-	96	32.900	ENSCSEG00000011566	-	91	32.900	Cynoglossus_semilaevis
ENSAMXG00000040526	-	86	34.972	ENSECAG00000034459	-	92	34.908	Equus_caballus
ENSAMXG00000040526	-	76	35.730	ENSGALG00000050905	-	96	35.839	Gallus_gallus
ENSAMXG00000040526	-	76	35.115	ENSGALG00000053504	-	96	35.224	Gallus_gallus
ENSAMXG00000040526	-	95	43.679	ENSLBEG00000013565	-	76	46.398	Labrus_bergylta
ENSAMXG00000040526	-	87	32.888	ENSMAMG00000010978	-	85	32.888	Mastacembelus_armatus
ENSAMXG00000040526	-	59	41.643	ENSMODG00000028191	-	99	41.643	Monodelphis_domestica
ENSAMXG00000040526	-	52	40.545	ENSMODG00000027524	-	99	40.545	Monodelphis_domestica
ENSAMXG00000040526	-	86	41.313	ENSMODG00000027641	-	92	41.449	Monodelphis_domestica
ENSAMXG00000040526	-	86	41.409	ENSMODG00000028385	-	92	41.546	Monodelphis_domestica
ENSAMXG00000040526	-	50	42.114	ENSMODG00000028815	-	95	42.114	Monodelphis_domestica
ENSAMXG00000040526	-	59	41.360	ENSMODG00000029806	-	99	41.360	Monodelphis_domestica
ENSAMXG00000040526	-	52	39.744	ENSMODG00000028221	-	99	39.744	Monodelphis_domestica
ENSAMXG00000040526	-	86	41.313	ENSMODG00000028573	-	92	41.449	Monodelphis_domestica
ENSAMXG00000040526	-	70	40.072	ENSMODG00000027851	-	99	40.072	Monodelphis_domestica
ENSAMXG00000040526	-	86	41.216	ENSMODG00000029722	-	93	41.353	Monodelphis_domestica
ENSAMXG00000040526	-	61	41.883	ENSMODG00000028692	-	100	42.077	Monodelphis_domestica
ENSAMXG00000040526	-	52	40.385	ENSMODG00000029391	-	99	40.385	Monodelphis_domestica
ENSAMXG00000040526	-	85	41.091	ENSMODG00000029740	-	92	41.091	Monodelphis_domestica
ENSAMXG00000040526	-	86	41.409	ENSMODG00000029698	-	92	41.546	Monodelphis_domestica
ENSAMXG00000040526	-	53	44.946	ENSMODG00000028686	-	85	44.691	Monodelphis_domestica
ENSAMXG00000040526	-	62	42.042	ENSMODG00000029316	-	90	42.231	Monodelphis_domestica
ENSAMXG00000040526	-	53	45.750	ENSMODG00000029647	-	79	45.440	Monodelphis_domestica
ENSAMXG00000040526	-	59	41.360	ENSMODG00000027329	-	99	41.360	Monodelphis_domestica
ENSAMXG00000040526	-	52	40.385	ENSMODG00000028121	-	99	40.385	Monodelphis_domestica
ENSAMXG00000040526	-	86	40.438	ENSMODG00000027661	-	89	40.438	Monodelphis_domestica
ENSAMXG00000040526	-	62	41.545	ENSMODG00000027664	-	98	41.733	Monodelphis_domestica
ENSAMXG00000040526	-	59	41.785	ENSMODG00000029516	-	99	41.785	Monodelphis_domestica
ENSAMXG00000040526	-	52	40.385	ENSMODG00000029294	-	99	40.385	Monodelphis_domestica
ENSAMXG00000040526	-	60	42.936	ENSMODG00000027448	-	89	43.135	Monodelphis_domestica
ENSAMXG00000040526	-	50	40.034	ENSMODG00000027863	-	99	40.034	Monodelphis_domestica
ENSAMXG00000040526	-	61	40.591	ENSMODG00000028504	-	82	40.591	Monodelphis_domestica
ENSAMXG00000040526	-	86	41.313	ENSMODG00000027428	-	83	41.449	Monodelphis_domestica
ENSAMXG00000040526	-	85	33.688	ENSONIG00000021180	-	85	33.430	Oreochromis_niloticus
ENSAMXG00000040526	-	60	42.003	ENSONIG00000021274	-	99	42.003	Oreochromis_niloticus
ENSAMXG00000040526	-	89	33.577	ENSORLG00020007796	-	69	34.144	Oryzias_latipes_hni
ENSAMXG00000040526	-	73	59.357	ENSOMEG00000005516	-	98	59.247	Oryzias_melastigma
ENSAMXG00000040526	-	99	55.500	ENSOMEG00000021132	-	87	56.040	Oryzias_melastigma
ENSAMXG00000040526	-	52	35.714	ENSOARG00000015892	-	79	35.714	Ovis_aries
ENSAMXG00000040526	-	57	34.599	ENSOARG00000001648	-	95	34.599	Ovis_aries
ENSAMXG00000040526	-	55	37.744	ENSOARG00000015221	-	76	37.615	Ovis_aries
ENSAMXG00000040526	-	50	33.445	ENSOARG00000000143	-	94	33.445	Ovis_aries
ENSAMXG00000040526	-	67	34.487	ENSOARG00000014856	-	85	34.487	Ovis_aries
ENSAMXG00000040526	-	67	34.487	ENSOARG00000009849	-	84	34.487	Ovis_aries
ENSAMXG00000040526	-	86	35.592	ENSPSIG00000001866	-	91	36.381	Pelodiscus_sinensis
ENSAMXG00000040526	-	53	37.037	ENSSSCG00000034697	-	50	36.735	Sus_scrofa
ENSAMXG00000040526	-	89	36.347	ENSSSCG00000034853	-	89	36.476	Sus_scrofa
ENSAMXG00000040526	-	74	33.998	ENSXMAG00000024544	-	94	33.666	Xiphophorus_maculatus
ENSAMXG00000040526	-	98	36.960	ENSXMAG00000022532	-	85	36.644	Xiphophorus_maculatus