EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040532 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3935 bases
Position: chrAPWO02000827.1:20446-24380
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043067	RVT_1	PF00078.27	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032250	-	384	-	ENSAMXP00000043067	127 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040532	-	86	31.061	ENSAMXG00000043299	-	65	31.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040532	-	80	33.871	ENSAPOG00000013951	-	72	33.871	Acanthochromis_polyacanthus
ENSAMXG00000040532	-	95	36.111	ENSAPEG00000013876	-	82	36.111	Amphiprion_percula
ENSAMXG00000040532	-	98	38.519	ENSACLG00000012084	-	84	38.519	Astatotilapia_calliptera
ENSAMXG00000040532	-	84	37.209	ENSLBEG00000003356	-	76	37.209	Labrus_bergylta
ENSAMXG00000040532	-	98	38.776	ENSMZEG00005016362	-	52	38.776	Maylandia_zebra
ENSAMXG00000040532	-	97	43.151	ENSMZEG00005008352	-	88	43.151	Maylandia_zebra
ENSAMXG00000040532	-	98	38.519	ENSMZEG00005026872	-	87	38.519	Maylandia_zebra
ENSAMXG00000040532	-	97	43.151	ENSNBRG00000003891	-	73	43.151	Neolamprologus_brichardi
ENSAMXG00000040532	-	98	32.432	ENSPKIG00000024018	-	53	32.432	Paramormyrops_kingsleyae
ENSAMXG00000040532	-	97	34.932	ENSPLAG00000014463	-	91	34.932	Poecilia_latipinna