EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040604 (Gene tree)
Gene ID: 103036303
Gene Symbol: -
Alias: H-ray
Full Name: ras-related protein Rab-35
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 11361 bases
Position: chrAPWO02000113.1:1452364-1463724
Accession: 103036303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029254	MMR_HSR1	PF01926.23	8.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044680	-	1538	XM_007255809	ENSAMXP00000029254	201 (aa)	XP_007255871	UPI0003CD205C
ENSAMXT00000016273	-	555	-	ENSAMXP00000016273	184 (aa)	-	W5L8W1

Gene Model

Click here to download ENSAMXG00000040604's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040604	-	80	49.383	ENSAMXG00000003155	rab11a	75	49.383
ENSAMXG00000040604	-	97	35.468	ENSAMXG00000026476	rab9b	87	35.000
ENSAMXG00000040604	-	74	46.753	ENSAMXG00000037428	-	72	46.753
ENSAMXG00000040604	-	97	34.826	ENSAMXG00000025889	RAB9A	97	34.826
ENSAMXG00000040604	-	78	47.468	ENSAMXG00000040879	rab25a	74	47.468
ENSAMXG00000040604	-	88	49.718	ENSAMXG00000043951	rab15	84	49.718
ENSAMXG00000040604	-	78	44.654	ENSAMXG00000039737	RAB19	73	44.654
ENSAMXG00000040604	-	59	31.061	ENSAMXG00000042798	arfrp1	64	31.061
ENSAMXG00000040604	-	99	48.756	ENSAMXG00000030712	rab13	88	52.542
ENSAMXG00000040604	-	83	35.294	ENSAMXG00000033764	si:ch73-116o1.2	79	35.294
ENSAMXG00000040604	-	80	47.531	ENSAMXG00000004882	rab12	84	39.614
ENSAMXG00000040604	-	96	30.964	ENSAMXG00000010919	mras	83	32.184
ENSAMXG00000040604	-	87	34.857	ENSAMXG00000004630	rab6ba	83	37.580
ENSAMXG00000040604	-	75	34.416	ENSAMXG00000033390	rap1aa	78	34.416
ENSAMXG00000040604	-	83	37.647	ENSAMXG00000033216	rab41	87	37.647
ENSAMXG00000040604	-	71	34.722	ENSAMXG00000033069	si:cabz01085950.1	70	34.722
ENSAMXG00000040604	-	79	45.679	ENSAMXG00000041657	rab39ba	76	45.679
ENSAMXG00000040604	-	80	63.580	ENSAMXG00000034850	-	80	63.580
ENSAMXG00000040604	-	80	64.815	ENSAMXG00000039486	zgc:171927	77	64.815
ENSAMXG00000040604	-	96	35.784	ENSAMXG00000043003	rab34a	79	35.784
ENSAMXG00000040604	-	86	47.701	ENSAMXG00000033470	RAB15	82	47.701
ENSAMXG00000040604	-	96	42.857	ENSAMXG00000040460	zgc:101559	79	42.857
ENSAMXG00000040604	-	99	39.130	ENSAMXG00000009640	rab14	74	46.541
ENSAMXG00000040604	-	95	40.625	ENSAMXG00000024632	rab11al	91	40.625
ENSAMXG00000040604	-	92	73.514	ENSAMXG00000038243	si:dkey-16l2.16	92	85.345
ENSAMXG00000040604	-	82	48.193	ENSAMXG00000042419	rab3c	76	48.193
ENSAMXG00000040604	-	76	49.677	ENSAMXG00000040286	rab33ba	65	49.677
ENSAMXG00000040604	-	76	38.961	ENSAMXG00000032547	rab6a	74	38.961
ENSAMXG00000040604	-	72	36.000	ENSAMXG00000029130	-	79	36.000
ENSAMXG00000040604	-	89	34.444	ENSAMXG00000014960	rab23	94	33.500
ENSAMXG00000040604	-	57	32.479	ENSAMXG00000031771	arl5c	62	32.479
ENSAMXG00000040604	-	95	37.056	ENSAMXG00000032027	rab7a	93	37.056
ENSAMXG00000040604	-	55	30.088	ENSAMXG00000006638	arl4aa	57	30.088
ENSAMXG00000040604	-	96	36.410	ENSAMXG00000043717	rab5c	88	36.410
ENSAMXG00000040604	-	91	45.109	ENSAMXG00000037623	-	81	46.591
ENSAMXG00000040604	-	96	39.175	ENSAMXG00000036179	rab5aa	89	39.175
ENSAMXG00000040604	-	76	37.419	ENSAMXG00000035885	hrasa	81	37.419
ENSAMXG00000040604	-	78	46.203	ENSAMXG00000036772	rab2a	75	46.203
ENSAMXG00000040604	-	96	33.981	ENSAMXG00000017266	rab36	79	33.981
ENSAMXG00000040604	-	87	39.444	ENSAMXG00000002254	-	86	39.444
ENSAMXG00000040604	-	97	33.166	ENSAMXG00000026059	RAB9A	97	33.166
ENSAMXG00000040604	-	76	37.419	ENSAMXG00000033907	hrasb	81	37.419
ENSAMXG00000040604	-	86	49.714	ENSAMXG00000009935	rab30	71	49.714
ENSAMXG00000040604	-	85	34.884	ENSAMXG00000012327	nras	95	34.884
ENSAMXG00000040604	-	80	40.373	ENSAMXG00000013054	rab22a	82	40.373
ENSAMXG00000040604	-	96	37.436	ENSAMXG00000035919	rab5ab	89	37.436
ENSAMXG00000040604	-	86	30.233	ENSAMXG00000040611	rabl2	76	30.233
ENSAMXG00000040604	-	88	36.413	ENSAMXG00000032663	si:dkey-13a21.4	81	36.932
ENSAMXG00000040604	-	82	44.643	ENSAMXG00000003717	rab39bb	76	45.679
ENSAMXG00000040604	-	80	63.975	ENSAMXG00000003547	rab1ba	73	63.975
ENSAMXG00000040604	-	96	31.959	ENSAMXG00000010334	rras	91	31.959
ENSAMXG00000040604	-	89	46.277	ENSAMXG00000042073	rab18b	80	50.000
ENSAMXG00000040604	-	98	42.439	ENSAMXG00000029712	rab25b	96	42.439
ENSAMXG00000040604	-	57	30.952	ENSAMXG00000033427	rasl10a	62	30.952
ENSAMXG00000040604	-	90	35.602	ENSAMXG00000006018	rab34b	79	36.634
ENSAMXG00000040604	-	97	36.946	ENSAMXG00000036330	RAB38	92	36.946
ENSAMXG00000040604	-	87	39.444	ENSAMXG00000031957	zgc:100918	87	39.444
ENSAMXG00000040604	-	100	53.465	ENSAMXG00000032564	rab1ab	80	64.815
ENSAMXG00000040604	-	86	34.286	ENSAMXG00000017217	kras	94	33.679
ENSAMXG00000040604	-	80	43.902	ENSAMXG00000032729	rab42a	77	43.902
ENSAMXG00000040604	-	79	46.541	ENSAMXG00000040126	-	58	46.541
ENSAMXG00000040604	-	98	31.220	ENSAMXG00000034227	rab32b	81	34.104
ENSAMXG00000040604	-	91	44.565	ENSAMXG00000042655	rab11bb	81	46.023
ENSAMXG00000040604	-	100	96.517	ENSAMXG00000039865	rab35b	100	96.517
ENSAMXG00000040604	-	96	35.897	ENSAMXG00000037267	-	92	35.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040604	-	100	90.547	ENSG00000111737	RAB35	100	90.547	Homo_sapiens
ENSAMXG00000040604	-	100	93.532	ENSAPOG00000007363	rab35b	100	93.532	Acanthochromis_polyacanthus
ENSAMXG00000040604	-	100	93.532	ENSAOCG00000005934	rab35b	100	93.532	Amphiprion_ocellaris
ENSAMXG00000040604	-	100	93.532	ENSAPEG00000001130	rab35b	100	93.532	Amphiprion_percula
ENSAMXG00000040604	-	100	93.532	ENSATEG00000013281	rab35b	100	93.532	Anabas_testudineus
ENSAMXG00000040604	-	100	91.045	ENSACAG00000003643	RAB35	100	91.045	Anolis_carolinensis
ENSAMXG00000040604	-	100	90.547	ENSANAG00000036954	RAB35	100	90.547	Aotus_nancymaae
ENSAMXG00000040604	-	100	90.547	ENSBTAG00000022044	RAB35	100	90.547	Bos_taurus
ENSAMXG00000040604	-	100	90.547	ENSCJAG00000008955	RAB35	100	90.547	Callithrix_jacchus
ENSAMXG00000040604	-	100	90.547	ENSCAFG00020018913	RAB35	100	90.547	Canis_lupus_dingo
ENSAMXG00000040604	-	100	90.547	ENSCCAG00000031720	RAB35	100	90.547	Cebus_capucinus
ENSAMXG00000040604	-	100	90.547	ENSCATG00000037465	RAB35	100	90.547	Cercocebus_atys
ENSAMXG00000040604	-	100	90.547	ENSCLAG00000013339	RAB35	100	90.547	Chinchilla_lanigera
ENSAMXG00000040604	-	100	90.547	ENSCSAG00000002276	RAB35	100	90.547	Chlorocebus_sabaeus
ENSAMXG00000040604	-	100	91.542	ENSCPBG00000012631	RAB35	100	91.542	Chrysemys_picta_bellii
ENSAMXG00000040604	-	100	86.567	ENSCGRG00001023636	Rab35	100	86.567	Cricetulus_griseus_chok1gshd
ENSAMXG00000040604	-	100	93.532	ENSCSEG00000013400	rab35b	100	93.532	Cynoglossus_semilaevis
ENSAMXG00000040604	-	100	94.030	ENSCVAG00000012806	rab35b	100	94.030	Cyprinodon_variegatus
ENSAMXG00000040604	-	100	81.095	ENSDARG00000102078	CABZ01072548.1	100	81.095	Danio_rerio
ENSAMXG00000040604	-	100	93.035	ENSDARG00000058425	rab35b	100	93.035	Danio_rerio
ENSAMXG00000040604	-	100	90.547	ENSDORG00000000972	Rab35	100	90.547	Dipodomys_ordii
ENSAMXG00000040604	-	100	94.030	ENSELUG00000023972	rab35	100	94.030	Esox_lucius
ENSAMXG00000040604	-	100	90.547	ENSFCAG00000032566	RAB35	100	90.547	Felis_catus
ENSAMXG00000040604	-	92	91.304	ENSFALG00000007652	RAB35	92	87.755	Ficedula_albicollis
ENSAMXG00000040604	-	100	93.532	ENSFHEG00000004891	rab35b	100	93.532	Fundulus_heteroclitus
ENSAMXG00000040604	-	95	92.670	ENSGMOG00000017688	rab35b	100	92.537	Gadus_morhua
ENSAMXG00000040604	-	100	91.542	ENSGALG00000007308	RAB35	100	91.542	Gallus_gallus
ENSAMXG00000040604	-	100	93.532	ENSGACG00000013548	rab35b	100	93.532	Gasterosteus_aculeatus
ENSAMXG00000040604	-	100	91.542	ENSGAGG00000017207	RAB35	100	91.542	Gopherus_agassizii
ENSAMXG00000040604	-	100	93.532	ENSHBUG00000001416	rab35b	100	93.532	Haplochromis_burtoni
ENSAMXG00000040604	-	100	90.547	ENSHGLG00000012703	RAB35	100	90.547	Heterocephalus_glaber_female
ENSAMXG00000040604	-	100	96.517	ENSIPUG00000011489	Rab35	100	96.517	Ictalurus_punctatus
ENSAMXG00000040604	-	100	95.025	ENSIPUG00000024622	rab35	100	95.025	Ictalurus_punctatus
ENSAMXG00000040604	-	100	90.547	ENSJJAG00000010646	Rab35	100	90.547	Jaculus_jaculus
ENSAMXG00000040604	-	100	94.030	ENSKMAG00000006854	rab35b	100	94.030	Kryptolebias_marmoratus
ENSAMXG00000040604	-	100	93.532	ENSLBEG00000001618	rab35b	100	93.532	Labrus_bergylta
ENSAMXG00000040604	-	100	78.922	ENSLACG00000018444	RAB35	100	78.922	Latimeria_chalumnae
ENSAMXG00000040604	-	100	94.030	ENSLOCG00000001637	rab35b	98	94.030	Lepisosteus_oculatus
ENSAMXG00000040604	-	100	90.547	ENSMFAG00000038261	RAB35	100	90.547	Macaca_fascicularis
ENSAMXG00000040604	-	100	90.547	ENSMMUG00000046831	RAB35	100	90.547	Macaca_mulatta
ENSAMXG00000040604	-	100	90.547	ENSMNEG00000043655	RAB35	100	90.547	Macaca_nemestrina
ENSAMXG00000040604	-	100	93.532	ENSMZEG00005002918	rab35b	100	93.532	Maylandia_zebra
ENSAMXG00000040604	-	92	91.304	ENSMGAG00000008922	RAB35	100	91.304	Meleagris_gallopavo
ENSAMXG00000040604	-	100	90.547	ENSMAUG00000009328	Rab35	100	90.547	Mesocricetus_auratus
ENSAMXG00000040604	-	100	90.547	ENSMICG00000047356	RAB35	100	90.547	Microcebus_murinus
ENSAMXG00000040604	-	98	86.735	ENSMOCG00000019999	Rab35	98	86.735	Microtus_ochrogaster
ENSAMXG00000040604	-	58	100.000	ENSMALG00000003479	rab35b	75	100.000	Monopterus_albus
ENSAMXG00000040604	-	100	90.547	MGP_CAROLIEiJ_G0027632	Rab35	100	90.547	Mus_caroli
ENSAMXG00000040604	-	100	90.547	ENSMUSG00000029518	Rab35	100	90.547	Mus_musculus
ENSAMXG00000040604	-	100	90.547	MGP_PahariEiJ_G0024212	Rab35	100	90.547	Mus_pahari
ENSAMXG00000040604	-	100	90.547	MGP_SPRETEiJ_G0028630	Rab35	100	90.547	Mus_spretus
ENSAMXG00000040604	-	100	90.547	ENSODEG00000007219	RAB35	100	90.547	Octodon_degus
ENSAMXG00000040604	-	100	93.532	ENSONIG00000015990	rab35b	100	93.532	Oreochromis_niloticus
ENSAMXG00000040604	-	100	93.532	ENSORLG00000028885	rab35b	100	93.532	Oryzias_latipes
ENSAMXG00000040604	-	100	93.035	ENSORLG00015010042	rab35b	100	93.035	Oryzias_latipes_hsok
ENSAMXG00000040604	-	100	90.547	ENSPPRG00000013225	RAB35	100	90.547	Panthera_pardus
ENSAMXG00000040604	-	100	90.547	ENSPTRG00000005524	RAB35	100	90.547	Pan_troglodytes
ENSAMXG00000040604	-	100	93.532	ENSPKIG00000025079	rab35b	100	93.532	Paramormyrops_kingsleyae
ENSAMXG00000040604	-	100	92.574	ENSPKIG00000016213	-	100	92.574	Paramormyrops_kingsleyae
ENSAMXG00000040604	-	100	94.030	ENSPFOG00000006655	rab35b	100	94.030	Poecilia_formosa
ENSAMXG00000040604	-	100	94.030	ENSPLAG00000020989	rab35b	100	94.030	Poecilia_latipinna
ENSAMXG00000040604	-	100	94.030	ENSPMEG00000021947	rab35b	100	94.030	Poecilia_mexicana
ENSAMXG00000040604	-	100	90.547	ENSPPYG00000005021	RAB35	100	90.547	Pongo_abelii
ENSAMXG00000040604	-	100	90.050	ENSPCOG00000026153	RAB35	100	90.050	Propithecus_coquereli
ENSAMXG00000040604	-	100	90.050	ENSPVAG00000003103	RAB35	100	90.050	Pteropus_vampyrus
ENSAMXG00000040604	-	100	94.030	ENSPNYG00000007156	rab35b	100	94.030	Pundamilia_nyererei
ENSAMXG00000040604	-	100	99.502	ENSPNAG00000014046	-	100	99.502	Pygocentrus_nattereri
ENSAMXG00000040604	-	100	90.547	ENSRNOG00000022014	Rab35	100	90.547	Rattus_norvegicus
ENSAMXG00000040604	-	100	95.025	ENSSFOG00015006076	rab35	100	95.025	Scleropages_formosus
ENSAMXG00000040604	-	100	93.532	ENSSMAG00000000660	rab35b	100	93.532	Scophthalmus_maximus
ENSAMXG00000040604	-	100	93.532	ENSSDUG00000004950	rab35b	100	93.532	Seriola_dumerili
ENSAMXG00000040604	-	100	91.045	ENSSPUG00000016258	RAB35	100	91.045	Sphenodon_punctatus
ENSAMXG00000040604	-	100	93.532	ENSSPAG00000008400	rab35b	100	93.532	Stegastes_partitus
ENSAMXG00000040604	-	100	90.547	ENSSSCG00000033876	RAB35	100	90.547	Sus_scrofa
ENSAMXG00000040604	-	100	91.045	ENSTGUG00000009359	RAB35	100	91.045	Taeniopygia_guttata
ENSAMXG00000040604	-	100	93.035	ENSTRUG00000020633	rab35b	100	93.035	Takifugu_rubripes
ENSAMXG00000040604	-	100	91.542	ENSXETG00000026943	rab35	100	91.542	Xenopus_tropicalis