EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4023 bases
Position: chrAPWO02001897.1:18563-22585
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000049107	RVT_1	PF00078.27	3.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040028	-	4023	-	ENSAMXP00000049107	1340 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040613	-	61	32.627	ENSAMXG00000038169	-	69	32.627
ENSAMXG00000040613	-	90	38.267	ENSAMXG00000041082	-	92	38.267
ENSAMXG00000040613	-	53	32.438	ENSAMXG00000035138	-	53	32.438
ENSAMXG00000040613	-	50	30.780	ENSAMXG00000035335	-	54	30.780
ENSAMXG00000040613	-	57	30.061	ENSAMXG00000029230	-	54	30.061
ENSAMXG00000040613	-	51	33.107	ENSAMXG00000032783	-	54	33.107
ENSAMXG00000040613	-	94	36.471	ENSAMXG00000042050	-	95	36.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040613	-	56	42.016	ENSAPOG00000012090	-	95	42.016	Acanthochromis_polyacanthus
ENSAMXG00000040613	-	79	35.960	ENSACLG00000025600	-	97	35.960	Astatotilapia_calliptera
ENSAMXG00000040613	-	76	39.010	ENSACLG00000005337	-	99	39.010	Astatotilapia_calliptera
ENSAMXG00000040613	-	92	37.481	ENSACLG00000015817	-	95	37.404	Astatotilapia_calliptera
ENSAMXG00000040613	-	94	36.174	ENSACLG00000017755	-	95	36.174	Astatotilapia_calliptera
ENSAMXG00000040613	-	77	40.432	ENSACLG00000018225	-	89	40.432	Astatotilapia_calliptera
ENSAMXG00000040613	-	61	40.479	ENSACLG00000027702	-	97	40.479	Astatotilapia_calliptera
ENSAMXG00000040613	-	61	45.904	ENSACLG00000022170	-	88	45.904	Astatotilapia_calliptera
ENSAMXG00000040613	-	96	39.510	ENSACLG00000016676	-	98	39.510	Astatotilapia_calliptera
ENSAMXG00000040613	-	72	38.673	ENSACLG00000017062	-	93	38.673	Astatotilapia_calliptera
ENSAMXG00000040613	-	78	42.696	ENSACLG00000008642	-	98	42.696	Astatotilapia_calliptera
ENSAMXG00000040613	-	75	38.477	ENSCVAG00000020225	-	99	38.477	Cyprinodon_variegatus
ENSAMXG00000040613	-	71	37.938	ENSHCOG00000007453	-	100	37.938	Hippocampus_comes
ENSAMXG00000040613	-	93	31.517	ENSORLG00000027118	-	94	31.517	Oryzias_latipes
ENSAMXG00000040613	-	70	38.773	ENSORLG00000025169	-	99	38.773	Oryzias_latipes
ENSAMXG00000040613	-	75	35.895	ENSORLG00000021791	-	99	35.895	Oryzias_latipes
ENSAMXG00000040613	-	93	38.088	ENSORLG00000023484	-	95	38.088	Oryzias_latipes
ENSAMXG00000040613	-	67	75.558	ENSORLG00000025291	-	95	75.558	Oryzias_latipes
ENSAMXG00000040613	-	93	31.591	ENSORLG00000029490	-	94	31.591	Oryzias_latipes
ENSAMXG00000040613	-	78	33.536	ENSORLG00000028630	-	92	33.624	Oryzias_latipes
ENSAMXG00000040613	-	90	43.182	ENSORLG00000022041	-	91	43.182	Oryzias_latipes
ENSAMXG00000040613	-	94	34.408	ENSORLG00000023329	-	94	34.408	Oryzias_latipes
ENSAMXG00000040613	-	94	34.558	ENSORLG00000027297	-	94	34.558	Oryzias_latipes
ENSAMXG00000040613	-	92	38.231	ENSORLG00020008265	-	94	38.468	Oryzias_latipes_hni
ENSAMXG00000040613	-	56	43.931	ENSORLG00020020421	-	99	43.931	Oryzias_latipes_hni
ENSAMXG00000040613	-	69	35.521	ENSORLG00020014275	-	92	35.521	Oryzias_latipes_hni
ENSAMXG00000040613	-	63	33.725	ENSORLG00020005152	-	90	33.725	Oryzias_latipes_hni
ENSAMXG00000040613	-	92	37.685	ENSORLG00020000502	-	96	37.721	Oryzias_latipes_hni
ENSAMXG00000040613	-	51	37.115	ENSORLG00020016480	-	89	37.115	Oryzias_latipes_hni
ENSAMXG00000040613	-	78	33.274	ENSORLG00020004233	-	87	33.274	Oryzias_latipes_hni
ENSAMXG00000040613	-	92	38.468	ENSORLG00020005861	-	94	38.702	Oryzias_latipes_hni
ENSAMXG00000040613	-	81	35.340	ENSORLG00020010381	-	92	35.340	Oryzias_latipes_hni
ENSAMXG00000040613	-	51	37.143	ENSORLG00015004212	-	97	37.143	Oryzias_latipes_hsok
ENSAMXG00000040613	-	93	38.335	ENSORLG00015011725	-	90	38.335	Oryzias_latipes_hsok
ENSAMXG00000040613	-	97	72.840	ENSORLG00015009567	-	97	72.840	Oryzias_latipes_hsok
ENSAMXG00000040613	-	62	41.086	ENSORLG00015008822	-	97	41.086	Oryzias_latipes_hsok
ENSAMXG00000040613	-	51	37.395	ENSORLG00015017638	-	89	37.395	Oryzias_latipes_hsok
ENSAMXG00000040613	-	93	37.806	ENSOMEG00000015349	-	90	37.964	Oryzias_melastigma
ENSAMXG00000040613	-	80	33.635	ENSPKIG00000014677	-	94	33.635	Paramormyrops_kingsleyae